
Microexon ID | Sm_GL377568:589063-589074:+ |
Species | Selaginella moellendorffii | Coordinates | GL377568:589063..589074 |
Microexon Cluster ID | Unclassified |
Size | 12 |
Sm_GL377568:589063-589074:+ does not have available information here.
Transcript ID | EFJ35048 |
Protein ID | EFJ35048 |
Gene ID | SELMODRAFT_438379 |
Gene Name | NA |
Pfam domain motif | ECF-ribofla_trS |
Motif E-value | 0.17 |
Motif start | 11 |
Motif end | 73 |
Protein seq | >EFJ35048 MVKDFARGSFNSLLFWVAGSVAMVAFGYAAGGCMLPYGSLVVLCADLFLVFHLSSSGCYFNAVCLVIVGCLLFGMTAPAP AAGLPPADSYVPDMIAWAKKLDENLTADFADGGIDWTSHATFRELHIPAFSGTDGNQTYMYMGRSLFKEIESFVSALRHG TSDNDNKPPGIIIGTPGWSGKTTVLATVAGYLRHLWKNTSKKVVFINGEDLVDNPLRTMWLALLLSYIDDLPAELLCRGW TLEALESWILSRWSEQLYFLVDEANAFDTTLNRKLGAPSAERRDEAYHSMKTMQLLHVVVYCSSVGPLWRSRVVSDKSPP YMLVTGGYSAEELQAYCEHEVRRAGRLQVEDPIVAYCRLRTRQEHRKLNANAKRIKVDGSEEELNLSDMELCSEFKSETG WVPGLVAHYGTWKLRTTYHMYEAGLREYIQEAVKDRDRWDSFIAVLGGVETIRRVLRDALDTRCFYVDPETQTGKCLSDS LRARTMVLITETLRYASDFEARMGIGQWTGLIRHDDNSARVGWNAEMATLIFIKHYGIVIDTEGLQLNFKPEVVVRFEGD FSPQFLIADNVSRFFPPVKFNHTGVDCLGENEKHVLWVQIATGVDVVLKHGNTLSRFLEMTKGDAREKVLVWILAVDSAD KIWIRNGVGYKEVFICFGRLSEMLKVIDVACCRLHLESSKNVKVASNPEEAKAEAEELRKLGRCGSLSTGSGNPCRRFRA KLVLLDDCSDKPMLQINEAGASKVRASKEDKDDDEDGVLQRKVVKQLHKTIWLGATISSDKDVSEDP* |
CDS seq | >EFJ35048 ATGGTTAAGGATTTTGCCAGAGGTAGCTTCAATTCGCTTTTATTTTGGGTTGCTGGAAGTGTGGCTATGGTGGCTTTTGG CTATGCTGCCGGTGGATGCATGCTCCCTTATGGATCCTTGGTCGTCCTTTGCGCGGATCTGTTCTTGGTATTCCATTTGT CCAGTTCTGGATGCTACTTTAATGCTGTCTGTCTAGTAATAGTTGGGTGTCTTCTCTTTGGGATGACTGCACCAGCGCCA GCAGCGGGACTTCCTCCAGCCGATTCTTACGTGCCTGACATGATCGCCTGGGCCAAAAAGCTGGACGAGAACCTGACCGC AGATTTTGCTGACGGCGGCATTGACTGGACAAGCCATGCGACTTTTCGGGAGCTCCATATTCCCGCTTTCTCTGGAACTG ATGGCAATCAAACATACATGTACATGGGTCGCTCACTCTTCAAGGAGATAGAAAGTTTTGTATCGGCCTTGAGACACGGC ACTTCGGATAATGACAACAAACCTCCAGGTATAATTATTGGAACTCCGGGGTGGTCTGGGAAGACCACTGTTCTTGCTAC TGTGGCTGGATATCTTCGGCACCTTTGGAAGAACACCTCCAAGAAGGTCGTCTTTATCAATGGCGAAGATTTGGTCGACA ATCCCTTGAGGACAATGTGGCTGGCTCTTTTGCTGAGCTACATAGACGACCTTCCAGCCGAGCTTTTGTGCCGGGGGTGG ACCTTGGAAGCATTAGAATCTTGGATCCTGTCGAGATGGTCAGAGCAGCTTTACTTTCTTGTGGACGAGGCCAACGCGTT TGACACCACGCTCAACAGAAAACTGGGGGCTCCCAGCGCGGAAAGAAGAGACGAGGCTTACCATTCTATGAAGACGATGC AATTGCTGCACGTCGTTGTCTACTGTTCGTCCGTCGGACCTCTGTGGAGGAGCAGAGTAGTGAGCGACAAAAGCCCTCCG TACATGTTAGTCACAGGTGGTTACAGCGCTGAGGAACTGCAGGCATATTGCGAACACGAGGTTCGTCGTGCCGGGCGGCT CCAAGTGGAGGATCCAATTGTGGCGTATTGCAGGCTTCGCACAAGGCAAGAACACCGGAAGTTGAATGCAAATGCTAAGC GCATTAAGGTTGATGGATCTGAGGAGGAGCTGAATTTGTCCGACATGGAGCTCTGCTCGGAATTCAAAAGTGAGACTGGC TGGGTTCCCGGGCTTGTCGCTCATTACGGGACCTGGAAACTACGGACCACGTACCACATGTACGAAGCTGGGCTGCGAGA GTATATCCAAGAGGCGGTCAAGGACCGAGATCGCTGGGATTCCTTCATAGCTGTGCTCGGCGGAGTGGAAACGATTAGAA GGGTGTTGCGAGACGCGCTAGACACTCGATGCTTCTACGTGGATCCAGAGACACAAACAGGAAAATGTCTATCAGATTCT CTGCGTGCGCGCACTATGGTGCTCATCACCGAGACTCTGCGGTACGCGTCCGACTTTGAGGCTAGGATGGGCATCGGCCA ATGGACAGGGCTGATCCGGCACGACGACAACAGTGCTCGGGTTGGGTGGAACGCAGAAATGGCAACTCTCATTTTCATCA AACACTATGGTATCGTTATTGACACGGAAGGTCTGCAGCTTAACTTCAAACCTGAAGTGGTTGTCAGATTCGAAGGTGAT TTCTCTCCCCAATTTCTGATCGCGGACAATGTTTCTCGTTTCTTCCCACCTGTGAAGTTCAACCACACGGGAGTTGATTG CCTTGGAGAAAACGAGAAGCACGTTTTGTGGGTGCAAATAGCGACTGGGGTGGATGTGGTATTGAAGCATGGAAATACGC TCTCGCGATTTTTGGAGATGACAAAAGGTGACGCGCGAGAGAAGGTTCTTGTCTGGATCTTGGCAGTGGACAGTGCTGAT AAGATATGGATACGCAATGGCGTGGGTTACAAGGAGGTGTTCATTTGTTTTGGCCGTTTGAGTGAAATGCTGAAAGTCAT CGACGTTGCATGCTGCAGGCTGCATCTCGAGAGTAGCAAGAACGTCAAGGTGGCAAGCAACCCTGAAGAAGCTAAAGCTG AGGCGGAGGAGTTGAGAAAGCTTGGTCGGTGCGGTTCCTTGAGCACGGGAAGTGGAAATCCCTGTCGGCGTTTTCGTGCC AAGCTTGTGCTTCTCGACGATTGCAGCGATAAGCCGATGCTGCAGATAAACGAAGCGGGTGCTTCTAAAGTGCGGGCTTC TAAAGAGGACAAGGATGATGATGAGGATGGAGTTCTGCAGAGAAAAGTTGTCAAGCAACTCCATAAGACTATATGGCTTG GAGCCACTATCTCTAGTGACAAGGATGTCTCCGAAGATCCTTGA |
Microexon DNA seq | TGCGCGGATCTG |
Microexon Amino Acid seq | VRGSD |
Microexon-tag DNA Seq | GAAGAAGAACAGCTGCGGAACAAGGAACTCCTCCTCCTCAAATCTAATGTGCGCGGATCTGACTTTATTGTGCCTCTCACAGCACCAGCGCCAGCAGCGGGACTTCCT |
Microexon-tag Amino Acid seq | EEEQLRNKELLLLKSNVRGSDFIVPLTAPAPAAGLP |
Transcript ID | Sm.2941.1 |
Gene ID | Sm.2941 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Sm.2941.1 MDEELAKVQAQIGLLQPQIQAAGESFLSACESGNQSLVEYWQKEEEQLWKEEEQLRKEEEQLRNKELLLLKSNVRGSDFI VPLTAPAPAAGLPPADSYVPDMIAWAKKLDENLTADFADGGIDWTSHATFRELHIPAFSGTDGNQTYMYMGRSLFKEIES FVSALRHGTSDNDNKPPGIIIGTPGWSGKTTVLATVAGYLRHLWKNTSKKVVFINGEDLVDNPLRTMWLALLLSYIDDLP AELLCRGWTLEALESWILSRWSEQLYFLVDEANAFDTTLNRKLGAPSAERRDEAYHSMKTMQLLHVVVYCSSVGPLWRSR VVSDKSPPYMLVTGGYSAEELQAYCEHEVRRAGRLQVEDPIVAYCRLRTRQEHRKLNANAKRIKVDGSEEELNLSDMELC SEFKSETGWVPGLVAHYGTWKLRTTYHMYEAGLREYIQEAVKDRDRWDSFIAVLGGVETIRRVLRDALDTRCFYVDPETQ TGKCLSDSLRARTMVLITETLRYASDFEARMGIGQWTGLIRHDDNSARVGWNAEMATLIFIKHYGIVIDTEGLQLNFKPE VVVRFEGDFSPQFLIADNVSRFFPPVKFNHTGVDCLGENEKHVLWVQIATGVDVVLKHGNTLSRFLEMTKGDAREKVLVW ILAVDSADKIWIRNGVGYKEVFICFGRLSEMLKVIDVACCRLHLESSKNVKVASNPEEAKAEAEELRKLGRCGSLSTGSG NPCRRFRGDEPYCHHHDKRP* |
CDS seq | >Sm.2941.1 ATGGACGAGGAATTGGCTAAGGTGCAGGCTCAAATCGGGCTTCTTCAGCCGCAGATCCAAGCGGCTGGGGAATCTTTTCT CTCTGCCTGTGAGAGTGGCAATCAATCTCTGGTGGAATATTGGCAGAAGGAAGAAGAACAGCTGTGGAAGGAAGAAGAAC AGCTGCGGAAGGAAGAAGAACAGCTGCGGAACAAGGAACTCCTCCTCCTCAAATCTAATGTGCGCGGATCTGACTTTATT GTGCCTCTCACAGCACCAGCGCCAGCAGCGGGACTTCCTCCAGCCGATTCTTACGTGCCTGACATGATCGCCTGGGCCAA AAAGCTGGACGAGAACCTGACCGCAGATTTTGCTGACGGCGGCATTGACTGGACAAGCCATGCGACTTTTCGGGAGCTCC ATATTCCCGCTTTCTCTGGAACTGATGGCAATCAAACATACATGTACATGGGTCGCTCACTCTTCAAGGAGATAGAAAGT TTTGTATCGGCCTTGAGACACGGCACTTCGGATAATGACAACAAACCTCCAGGTATAATTATTGGAACTCCGGGGTGGTC TGGGAAGACCACTGTTCTTGCTACTGTGGCTGGATATCTTCGGCACCTTTGGAAGAACACCTCCAAGAAGGTCGTCTTTA TCAATGGCGAAGATTTGGTCGACAATCCCTTGAGGACAATGTGGCTGGCTCTTTTGCTGAGCTACATAGACGACCTTCCA GCCGAGCTTTTGTGCCGGGGGTGGACCTTGGAAGCATTAGAATCTTGGATCCTGTCGAGATGGTCAGAGCAGCTTTACTT TCTTGTGGACGAGGCCAACGCGTTTGACACCACGCTCAACAGAAAACTGGGGGCTCCCAGCGCGGAAAGAAGAGACGAGG CTTACCATTCTATGAAGACGATGCAATTGCTGCACGTCGTTGTCTACTGTTCGTCCGTCGGACCTCTGTGGAGGAGCAGA GTAGTGAGCGACAAAAGCCCTCCGTACATGTTAGTCACAGGTGGTTACAGCGCTGAGGAACTGCAGGCATATTGCGAACA CGAGGTTCGTCGTGCCGGGCGGCTCCAAGTGGAGGATCCAATTGTGGCGTATTGCAGGCTTCGCACAAGGCAAGAACACC GGAAGTTGAATGCAAATGCTAAGCGCATTAAGGTTGATGGATCTGAGGAGGAGCTGAATTTGTCCGACATGGAGCTCTGC TCGGAATTCAAAAGTGAGACTGGCTGGGTTCCCGGGCTTGTCGCTCATTACGGGACCTGGAAACTACGGACCACGTACCA CATGTACGAAGCTGGGCTGCGAGAGTATATCCAAGAGGCGGTCAAGGACCGAGATCGCTGGGATTCCTTCATAGCTGTGC TCGGCGGAGTGGAAACGATTAGAAGGGTGTTGCGAGACGCGCTAGACACTCGATGCTTCTACGTGGATCCAGAGACACAA ACAGGAAAATGTCTATCAGATTCTCTGCGTGCGCGCACTATGGTGCTCATCACCGAGACTCTGCGGTACGCGTCCGACTT TGAGGCTAGGATGGGCATCGGCCAATGGACAGGGCTGATCCGGCACGACGACAACAGTGCTCGGGTTGGGTGGAACGCAG AAATGGCAACTCTCATTTTCATCAAACACTATGGTATCGTTATTGACACGGAAGGTCTGCAGCTTAACTTCAAACCTGAA GTGGTTGTCAGATTCGAAGGTGATTTCTCTCCCCAATTTCTGATCGCGGACAATGTTTCTCGTTTCTTCCCACCTGTGAA GTTCAACCACACGGGAGTTGATTGCCTTGGAGAAAACGAGAAGCACGTTTTGTGGGTGCAAATAGCGACTGGGGTGGATG TGGTATTGAAGCATGGAAATACGCTCTCGCGATTTTTGGAGATGACAAAAGGTGACGCGCGAGAGAAGGTTCTTGTCTGG ATCTTGGCAGTGGACAGTGCTGATAAGATATGGATACGCAATGGCGTGGGTTACAAGGAGGTGTTCATTTGTTTTGGCCG TTTGAGTGAAATGCTGAAAGTCATCGACGTTGCATGCTGCAGGCTGCATCTCGAGAGTAGCAAGAACGTCAAGGTGGCAA GCAACCCTGAAGAAGCTAAAGCTGAGGCGGAGGAGTTGAGAAAGCTTGGTCGGTGCGGTTCCTTGAGCACGGGAAGTGGA AATCCCTGTCGGCGTTTTCGTGGTGACGAGCCATATTGCCATCACCACGATAAGCGTCCTTGA |