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The database contains the following data



List of all microexons clusters



List of all microexons in 10 plant species with basic information

List of all microexons in 10 plant species with annotation information

List of all microexons in 10 plant species with RNA-seq information

List of all microexons in 10 plant species with prediction information


List of all microexons in 6 plant species with basic information

List of all microexons in 6 plant species with annotation information

List of all microexons in 6 plant species with prediction information


List of all microexons in 132 plant species with basic information

List of all microexons in 132 plant species with prediction information



GFF3 files for microexons in 15 plant species



List of 132 plant species taxonomic classification.





The list of accession numbers of RNA-seq datasets that were used to detect microexons.

datasets





Reference:

H. Yu, M. L, J. Sandhu, G. Sun, J.C. Schnable, W. Xie, B. Yu, J.P. Mower, Chi Zhang. Pervasive misannotation of microexons that are evolutionarily conserved and crucial for gene function in plants. Nature Communications (2022); 13, 820. (featured in Editors' Highlights)

The evolutionary tree of 132 plant species illustrats microexon distribution.

Systems Biology Laboratory of Chi Zhang

Center for Plant Science Innovation

University of Nebraska - Lincoln

1901 Vine St. Lincoln, NE 68588