
Microexon ID | Pp_27:1285678-1285685:- |
Species | Physcomitrium patens | Coordinates | 27:1285678..1285685 |
Microexon Cluster ID | Unclassified |
Size | 8 |
Pp_27:1285678-1285685:- does not have available information here.
Transcript ID | Pp3c27_2280V3.1 |
Protein ID | Pp3c27_2280V3.1 |
Gene ID | Pp3c27_2280 |
Gene Name | NA |
Pfam domain motif | CD34_antigen |
Motif E-value | 0.014 |
Motif start | 241 |
Motif end | 287 |
Protein seq | >Pp3c27_2280V3.1 MTRQESPKSIWPSNSSLLLRILVLQYVFMLTWEVGNAACVPEKGCDAAYAFYRTQVGDTLVKIGTLFQTTNERIGAVNPV ITDLNFIDQNVPLYIPFRCDCINDQLLQKFQYQVQATDTIENITAIVYENLTQLNWVTGLNSISDPNYVETDRFLVIPVN CSCGNPTVSSDYGLFLTYPVVAGTGGNLSGIASEFNASEDLVRKLNPNVVWENSQPTQYAFIPVRDTSGKYPAYNGGTIK AGKSSSTALIIGVAVGGVALIIIILALLYCFCIYQPMKRQKKLKLGDPFIRSDGNYSGSASEQIHSTSSNPGSASFIPKV LADYTVDKSVEFTYEELAKATDNFSVANKIGQGGFASVYYGVIRGQKLAIKMMNLQATREFMAELQVLTHVHHTNLVQLI GYCTTDYLFLIYEFLENGTLDQHLHSARAAREPLSWSSRVQVALDAARGLEYIHEHTKPTYIHRDIKSANILLDKQFHAK VADFGLTKLTETRAVGSDAVTQSTRVVGTWGYMSPEYARFGEVTPMLDVYSFGVVLFEILSGREAIMRGALTLTEDFSSS NARPKDEQRALVTYFDPVLKYPNGKEKLPRFMDPSLGDNYPLEAAWKMAQLAEACTQEDPTRRPNMRKAVVALMTLSSST QDWELSSFGRHSGSSTSFSDQRH* |
CDS seq | >Pp3c27_2280V3.1 ATGACGCGGCAGGAGTCGCCGAAGTCGATATGGCCATCCAACAGCAGCCTATTGCTGAGGATTCTAGTGCTTCAGTATGT GTTCATGCTTACCTGGGAAGTAGGGAACGCTGCGTGTGTGCCAGAGAAAGGGTGCGACGCTGCCTACGCCTTCTACCGCA CGCAGGTGGGCGATACCTTGGTAAAAATTGGAACTCTATTTCAAACCACAAATGAAAGGATTGGAGCTGTCAACCCCGTC ATCACAGATCTAAATTTCATCGACCAGAACGTTCCATTGTACATTCCCTTCAGATGCGATTGCATCAACGACCAACTGCT GCAAAAGTTTCAGTATCAAGTCCAAGCGACCGATACTATCGAAAATATCACTGCCATTGTGTACGAGAATCTTACTCAAT TGAATTGGGTCACGGGGTTGAACTCTATTTCAGATCCGAATTACGTAGAGACTGATAGATTCTTGGTAATTCCAGTGAAC TGTTCGTGTGGTAACCCAACTGTGAGTTCAGATTATGGTCTTTTCCTTACATATCCTGTGGTGGCTGGAACGGGTGGCAA CCTGAGCGGCATTGCTTCAGAATTCAACGCAAGTGAGGATCTTGTGAGAAAGTTAAATCCCAACGTTGTCTGGGAAAATT CACAGCCTACGCAGTATGCTTTCATTCCGGTGAGAGACACAAGTGGCAAGTATCCTGCGTACAATGGTGGCACAATTAAA GCAGGGAAATCTTCCAGCACGGCCTTAATAATAGGAGTTGCGGTCGGAGGAGTAGCTCTTATAATCATTATTTTGGCACT GCTTTACTGTTTCTGCATCTACCAACCAATGAAACGGCAAAAGAAGCTGAAACTTGGAGATCCATTTATCAGAAGTGACG GGAATTATTCCGGATCCGCTAGTGAGCAGATCCATTCAACTTCGTCGAATCCAGGAAGTGCTTCCTTCATCCCCAAAGTC TTAGCAGATTACACCGTAGACAAGTCAGTGGAGTTTACGTATGAGGAGCTAGCCAAGGCCACTGACAATTTCAGCGTGGC TAATAAGATTGGACAAGGTGGATTCGCATCGGTGTACTATGGAGTCATACGAGGACAGAAATTGGCCATCAAGATGATGA ACCTACAAGCAACCAGGGAGTTTATGGCTGAGCTCCAAGTTTTAACCCATGTTCACCACACGAATTTGGTTCAACTGATC GGTTACTGTACCACAGACTATTTATTTTTGATATACGAATTTTTGGAGAACGGAACTTTAGACCAACATTTACACTCCGC AAGAGCTGCCAGAGAACCACTATCTTGGTCATCTAGAGTGCAAGTTGCATTAGATGCTGCACGAGGATTGGAGTACATTC ATGAGCACACCAAGCCAACTTACATTCACCGGGATATTAAGTCTGCTAACATACTCCTTGACAAGCAATTCCATGCAAAG GTCGCAGATTTTGGTCTCACGAAACTCACTGAAACAAGAGCTGTAGGATCAGATGCAGTGACTCAATCTACTAGAGTGGT TGGTACCTGGGGTTACATGTCTCCAGAATACGCACGATTTGGAGAGGTGACACCCATGCTCGACGTCTACTCGTTTGGTG TGGTATTGTTCGAGATCTTATCTGGAAGAGAAGCCATTATGCGAGGAGCCTTGACCTTAACCGAAGATTTTTCTTCGAGC AATGCTCGACCGAAAGACGAACAAAGAGCTCTGGTCACTTATTTTGACCCTGTGTTGAAATATCCAAACGGGAAGGAGAA ATTACCCAGGTTCATGGATCCTTCTCTTGGAGATAATTACCCTTTGGAGGCAGCATGGAAGATGGCGCAATTAGCTGAGG CATGCACGCAAGAGGACCCAACTAGACGACCAAACATGCGGAAGGCAGTGGTAGCACTCATGACTTTGTCATCGTCAACT CAAGATTGGGAGCTCAGCTCTTTTGGCAGACACAGTGGAAGCTCAACGTCATTCAGCGATCAACGGCACTGA |
Microexon DNA seq | TGGCACAA |
Microexon Amino Acid seq | GGTI |
Microexon-tag DNA Seq | GCTTTCATTCCGGTGAGAGACACAAGTGGCAAGTATCCTGCGTACAATGGTGGCACAATTAAAGCAGGGAAATCTTCCAGCACGGCCTTAATAATAGGAGTTGCGGTC |
Microexon-tag Amino Acid seq | AFIPVRDTSGKYPAYNGGTIKAGKSSSTALIIGVAV |
Transcript ID | Pp.17446.1 |
Gene ID | Pp.17446 |
Gene Name | NA |
Pfam domain motif | CD34_antigen |
Motif E-value | 0.014 |
Motif start | 241 |
Motif end | 287 |
Protein seq | >Pp.17446.1 MTRQESPKSIWPSNSSLLLRILVLQYVFMLTWEVGNAACVPEKGCDAAYAFYRTQVGDTLVKIGTLFQTTNERIGAVNPV ITDLNFIDQNVPLYIPFRCDCINDQLLQKFQYQVQATDTIENITAIVYENLTQLNWVTGLNSISDPNYVETDRFLVIPVN CSCGNPTVSSDYGLFLTYPVVAGTGGNLSGIASEFNASEDLVRKLNPNVVWENSQPTQYAFIPVRDTSGKYPAYNGGTIK AGKSSSTALIIGVAVGGVALIIIILALLYCFCIYQPMKRQKKLKLGDPFIRSDGNYSGSASEQIHSTSSNPGSASFIPKV LADYTVDKSVEFTYEELAKATDNFSVANKIGQGGFASVYYGVIRGQKLAIKMMNLQATREFMAELQVLTHVHHTNLVQLI GYCTTDYLFLIYEFLENGTLDQHLHSARAAREPLSWSSRVQVALDAARGLEYIHEHTKPTYIHRDIKSANILLDKQFHAK VADFGLTKLTETRAVGSDAVTQSTRVVGTWGYMSPEYARFGEVTPMLDVYSFGVVLFEILSGREAIMRGALTLTEDFSSS NARPKDEQRALVTYFDPVLKYPNGKEKLPRFMDPSLGDNYPLEAAWKMAQLAEACTQEDPTRRPNMRKAVVALMTLSSST QDWELSSFGRHSGSSTSFSDQRH* |
CDS seq | >Pp.17446.1 ATGACGCGGCAGGAGTCGCCGAAGTCGATATGGCCATCCAACAGCAGCCTATTGCTGAGGATTCTAGTGCTTCAGTATGT GTTCATGCTTACCTGGGAAGTAGGGAACGCTGCGTGTGTGCCAGAGAAAGGGTGCGACGCTGCCTACGCCTTCTACCGCA CGCAGGTGGGCGATACCTTGGTAAAAATTGGAACTCTATTTCAAACCACAAATGAAAGGATTGGAGCTGTCAACCCCGTC ATCACAGATCTAAATTTCATCGACCAGAACGTTCCATTGTACATTCCCTTCAGATGCGATTGCATCAACGACCAACTGCT GCAAAAGTTTCAGTATCAAGTCCAAGCGACCGATACTATCGAAAATATCACTGCCATTGTGTACGAGAATCTTACTCAAT TGAATTGGGTCACGGGGTTGAACTCTATTTCAGATCCGAATTACGTAGAGACTGATAGATTCTTGGTAATTCCAGTGAAC TGTTCGTGTGGTAACCCAACTGTGAGTTCAGATTATGGTCTTTTCCTTACATATCCTGTGGTGGCTGGAACGGGTGGCAA CCTGAGCGGCATTGCTTCAGAATTCAACGCAAGTGAGGATCTTGTGAGAAAGTTAAATCCCAACGTTGTCTGGGAAAATT CACAGCCTACGCAGTATGCTTTCATTCCGGTGAGAGACACAAGTGGCAAGTATCCTGCGTACAATGGTGGCACAATTAAA GCAGGGAAATCTTCCAGCACGGCCTTAATAATAGGAGTTGCGGTCGGAGGAGTAGCTCTTATAATCATTATTTTGGCACT GCTTTACTGTTTCTGCATCTACCAACCAATGAAACGGCAAAAGAAGCTGAAACTTGGAGATCCATTTATCAGAAGTGACG GGAATTATTCCGGATCCGCTAGTGAGCAGATCCATTCAACTTCGTCGAATCCAGGAAGTGCTTCCTTCATCCCCAAAGTC TTAGCAGATTACACCGTAGACAAGTCAGTGGAGTTTACGTATGAGGAGCTAGCCAAGGCCACTGACAATTTCAGCGTGGC TAATAAGATTGGACAAGGTGGATTCGCATCGGTGTACTATGGAGTCATACGAGGACAGAAATTGGCCATCAAGATGATGA ACCTACAAGCAACCAGGGAGTTTATGGCTGAGCTCCAAGTTTTAACCCATGTTCACCACACGAATTTGGTTCAACTGATC GGTTACTGTACCACAGACTATTTATTTTTGATATACGAATTTTTGGAGAACGGAACTTTAGACCAACATTTACACTCCGC AAGAGCTGCCAGAGAACCACTATCTTGGTCATCTAGAGTGCAAGTTGCATTAGATGCTGCACGAGGATTGGAGTACATTC ATGAGCACACCAAGCCAACTTACATTCACCGGGATATTAAGTCTGCTAACATACTCCTTGACAAGCAATTCCATGCAAAG GTCGCAGATTTTGGTCTCACGAAACTCACTGAAACAAGAGCTGTAGGATCAGATGCAGTGACTCAATCTACTAGAGTGGT TGGTACCTGGGGTTACATGTCTCCAGAATACGCACGATTTGGAGAGGTGACACCCATGCTCGACGTCTACTCGTTTGGTG TGGTATTGTTCGAGATCTTATCTGGAAGAGAAGCCATTATGCGAGGAGCCTTGACCTTAACCGAAGATTTTTCTTCGAGC AATGCTCGACCGAAAGACGAACAAAGAGCTCTGGTCACTTATTTTGACCCTGTGTTGAAATATCCAAACGGGAAGGAGAA ATTACCCAGGTTCATGGATCCTTCTCTTGGAGATAATTACCCTTTGGAGGCAGCATGGAAGATGGCGCAATTAGCTGAGG CATGCACGCAAGAGGACCCAACTAGACGACCAAACATGCGGAAGGCAGTGGTAGCACTCATGACTTTGTCATCGTCAACT CAAGATTGGGAGCTCAGCTCTTTTGGCAGACACAGTGGAAGCTCAACGTCATTCAGCGATCAACGGCACTGA |