
Microexon ID | Pp_26:856783-856787:+ |
Species | Physcomitrium patens | Coordinates | 26:856783..856787 |
Microexon Cluster ID | Unclassified |
Size | 5 |
Pp_26:856783-856787:+ does not have available information here.
Transcript ID | Pp3c26_1820V3.1 |
Protein ID | Pp3c26_1820V3.1 |
Gene ID | Pp3c26_1820 |
Gene Name | NA |
Pfam domain motif | DUF535 |
Motif E-value | 0.87 |
Motif start | 97 |
Motif end | 144 |
Protein seq | >Pp3c26_1820V3.1 MRGCGLFTLDTQVGQCPVKMASGEDSQRSSSRKAHLFDFCIKFLRISGIRLPIPPHSGDFTGSSSKIRQTYFLKITLLHG TEQQIIGEFEVVGDECIINHQISCQIAYARPDKLHVYIDQNWSAGLSGHITVDFKEFFEDLDAEICLEYPLFSSGPSHVR SPAKLEMSVLCACSTKSALFSNQLHLNQEYMNFEDLSKIRPSLEDLWYPPDQLNPESGQEALSMLPGSVLKQVTPSNLCL DKVDREIEMLKEMEGDLIELNSKLNKYVAAQSLEGYAPEQYTRKIPTRPDVVAAAFFAAGMAFQRQVDNIKRHRMYSGTE DPLLPGESPRLLLEDVSSTFKSEAPTNQEVQEVDTFCHGSSRSLVFSENSHSCGLPQSCSCSSEAATSLAGDIDEDENDQ SFVDSSVCSGDTSLSLSEPELSSPRTSSDTRSSLGECSTSEGTMNFVRNDILSEPHGRLKKNNVLSVVDSVLGALAIIGS PGSRSKDIHPGGSKDERVTIAGSMLGRQQVTSIQAIRKSNPGLGWLTNSMQFE* |
CDS seq | >Pp3c26_1820V3.1 ATGCGAGGTTGTGGATTATTTACACTTGACACTCAAGTAGGACAATGTCCTGTGAAGATGGCATCGGGTGAAGATTCGCA AAGATCTTCGTCGCGTAAAGCTCATCTATTTGACTTTTGTATCAAGTTTTTAAGGATATCTGGGATACGTCTTCCTATCC CGCCACATTCTGGAGACTTCACAGGGAGCTCTTCAAAGATTCGACAGACATATTTTCTGAAGATCACTCTTCTACACGGA ACTGAACAACAGATAATTGGAGAGTTTGAAGTAGTTGGCGACGAATGCATCATCAATCACCAGATCTCGTGCCAAATTGC GTATGCTAGGCCTGATAAGCTTCACGTGTACATAGACCAGAATTGGAGTGCTGGTTTGTCTGGACATATTACCGTGGATT TTAAGGAGTTTTTTGAGGACCTTGATGCTGAAATCTGTCTTGAATACCCTCTATTTTCAAGTGGACCGTCACATGTTCGA AGTCCAGCTAAGTTGGAGATGTCGGTCTTATGTGCCTGCTCAACCAAGTCCGCTTTGTTTTCAAATCAACTTCATCTTAA CCAAGAATATATGAACTTCGAGGATTTAAGTAAAATTAGGCCATCCTTAGAGGATCTTTGGTACCCACCAGATCAGTTGA ACCCTGAAAGCGGCCAGGAGGCTCTATCAATGCTACCCGGGAGCGTTCTCAAACAGGTCACACCATCAAATCTGTGCCTT GATAAAGTTGATAGAGAGATTGAAATGCTGAAGGAAATGGAAGGTGACCTCATTGAACTAAATTCGAAGTTAAACAAATA TGTAGCAGCACAAAGCTTGGAGGGATATGCACCTGAACAATATACGCGTAAGATTCCGACTAGACCGGACGTTGTGGCAG CTGCGTTTTTCGCAGCAGGCATGGCTTTCCAAAGACAAGTCGACAATATTAAGAGACATAGAATGTACAGCGGAACCGAG GATCCACTTTTGCCTGGAGAAAGTCCACGCTTGCTTCTAGAAGATGTTTCGTCAACCTTCAAGAGTGAAGCGCCTACAAA CCAAGAAGTTCAAGAGGTTGACACATTTTGCCATGGATCAAGTAGGAGTCTCGTTTTTAGTGAAAACTCGCATAGTTGCG GCCTTCCACAGTCTTGCAGCTGCAGCAGTGAAGCTGCCACAAGTTTGGCAGGAGACATAGATGAAGACGAGAATGACCAA AGCTTTGTAGATTCTTCTGTATGCTCCGGGGATACGTCCTTATCCCTTTCGGAACCAGAACTATCAAGTCCAAGGACCTC TAGTGATACACGTTCATCACTTGGTGAATGTAGTACTTCAGAAGGGACCATGAATTTCGTTAGGAATGATATTCTCAGTG AGCCACATGGTAGGTTAAAAAAAAACAACGTATTGAGTGTTGTAGATAGCGTACTTGGGGCTTTGGCAATCATAGGTTCA CCAGGTTCTAGATCCAAGGATATTCATCCTGGAGGCAGCAAAGACGAGAGAGTAACTATTGCAGGATCAATGCTTGGGAG ACAACAGGTCACGAGTATCCAAGCAATCCGTAAGAGCAATCCAGGTTTGGGTTGGCTCACAAATTCAATGCAGTTTGAGT GA |
Microexon DNA seq | ACCAG |
Microexon Amino Acid seq | DQ |
Microexon-tag DNA Seq | ATCTCGTGCCAAATTGCGTATGCTAGGCCTGATAAGCTTCACGTGTACATAGACCAGAATTGGAGTGCTGGTTTGTCTGGACATATTACCGTGGATTTTAAGGAGTTT |
Microexon-tag Amino Acid seq | ISCQIAYARPDKLHVYIDQNWSAGLSGHITVDFKEF |
Transcript ID | Pp3c26_1820V3.1 |
Gene ID | Pp.16908 |
Gene Name | NA |
Pfam domain motif | DUF535 |
Motif E-value | 0.87 |
Motif start | 97 |
Motif end | 144 |
Protein seq | >Pp3c26_1820V3.1 MRGCGLFTLDTQVGQCPVKMASGEDSQRSSSRKAHLFDFCIKFLRISGIRLPIPPHSGDFTGSSSKIRQTYFLKITLLHG TEQQIIGEFEVVGDECIINHQISCQIAYARPDKLHVYIDQNWSAGLSGHITVDFKEFFEDLDAEICLEYPLFSSGPSHVR SPAKLEMSVLCACSTKSALFSNQLHLNQEYMNFEDLSKIRPSLEDLWYPPDQLNPESGQEALSMLPGSVLKQVTPSNLCL DKVDREIEMLKEMEGDLIELNSKLNKYVAAQSLEGYAPEQYTRKIPTRPDVVAAAFFAAGMAFQRQVDNIKRHRMYSGTE DPLLPGESPRLLLEDVSSTFKSEAPTNQEVQEVDTFCHGSSRSLVFSENSHSCGLPQSCSCSSEAATSLAGDIDEDENDQ SFVDSSVCSGDTSLSLSEPELSSPRTSSDTRSSLGECSTSEGTMNFVRNDILSEPHGRLKKNNVLSVVDSVLGALAIIGS PGSRSKDIHPGGSKDERVTIAGSMLGRQQVTSIQAIRKSNPGLGWLTNSMQFE* |
CDS seq | >Pp3c26_1820V3.1 ATGCGAGGTTGTGGATTATTTACACTTGACACTCAAGTAGGACAATGTCCTGTGAAGATGGCATCGGGTGAAGATTCGCA AAGATCTTCGTCGCGTAAAGCTCATCTATTTGACTTTTGTATCAAGTTTTTAAGGATATCTGGGATACGTCTTCCTATCC CGCCACATTCTGGAGACTTCACAGGGAGCTCTTCAAAGATTCGACAGACATATTTTCTGAAGATCACTCTTCTACACGGA ACTGAACAACAGATAATTGGAGAGTTTGAAGTAGTTGGCGACGAATGCATCATCAATCACCAGATCTCGTGCCAAATTGC GTATGCTAGGCCTGATAAGCTTCACGTGTACATAGACCAGAATTGGAGTGCTGGTTTGTCTGGACATATTACCGTGGATT TTAAGGAGTTTTTTGAGGACCTTGATGCTGAAATCTGTCTTGAATACCCTCTATTTTCAAGTGGACCGTCACATGTTCGA AGTCCAGCTAAGTTGGAGATGTCGGTCTTATGTGCCTGCTCAACCAAGTCCGCTTTGTTTTCAAATCAACTTCATCTTAA CCAAGAATATATGAACTTCGAGGATTTAAGTAAAATTAGGCCATCCTTAGAGGATCTTTGGTACCCACCAGATCAGTTGA ACCCTGAAAGCGGCCAGGAGGCTCTATCAATGCTACCCGGGAGCGTTCTCAAACAGGTCACACCATCAAATCTGTGCCTT GATAAAGTTGATAGAGAGATTGAAATGCTGAAGGAAATGGAAGGTGACCTCATTGAACTAAATTCGAAGTTAAACAAATA TGTAGCAGCACAAAGCTTGGAGGGATATGCACCTGAACAATATACGCGTAAGATTCCGACTAGACCGGACGTTGTGGCAG CTGCGTTTTTCGCAGCAGGCATGGCTTTCCAAAGACAAGTCGACAATATTAAGAGACATAGAATGTACAGCGGAACCGAG GATCCACTTTTGCCTGGAGAAAGTCCACGCTTGCTTCTAGAAGATGTTTCGTCAACCTTCAAGAGTGAAGCGCCTACAAA CCAAGAAGTTCAAGAGGTTGACACATTTTGCCATGGATCAAGTAGGAGTCTCGTTTTTAGTGAAAACTCGCATAGTTGCG GCCTTCCACAGTCTTGCAGCTGCAGCAGTGAAGCTGCCACAAGTTTGGCAGGAGACATAGATGAAGACGAGAATGACCAA AGCTTTGTAGATTCTTCTGTATGCTCCGGGGATACGTCCTTATCCCTTTCGGAACCAGAACTATCAAGTCCAAGGACCTC TAGTGATACACGTTCATCACTTGGTGAATGTAGTACTTCAGAAGGGACCATGAATTTCGTTAGGAATGATATTCTCAGTG AGCCACATGGTAGGTTAAAAAAAAACAACGTATTGAGTGTTGTAGATAGCGTACTTGGGGCTTTGGCAATCATAGGTTCA CCAGGTTCTAGATCCAAGGATATTCATCCTGGAGGCAGCAAAGACGAGAGAGTAACTATTGCAGGATCAATGCTTGGGAG ACAACAGGTCACGAGTATCCAAGCAATCCGTAAGAGCAATCCAGGTTTGGGTTGGCTCACAAATTCAATGCAGTTTGAGT GA |