
Microexon ID | Pp_11:16763872-16763886:+ |
Species | Physcomitrium patens | Coordinates | 11:16763872..16763886 |
Microexon Cluster ID | Unclassified |
Size | 15 |
Pp_11:16763872-16763886:+ does not have available information here.
Transcript ID | Pp3c11_25660V3.3 |
Protein ID | Pp3c11_25660V3.3 |
Gene ID | Pp3c11_25660 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 0.63 |
Motif start | 88 |
Motif end | 125 |
Protein seq | >Pp3c11_25660V3.3 MTLQPRNSASQLLEMEIVRQKLKELVSLGWTYGVLWKIGPDRRTPVWYQGYFNESMQVDISQKQQFESVYRHCRFTPTRP GYAYIAWHRQAPCWWTGHSEPVLTDENKEMFLRQAGIQTLVCFPGRAKIDGSCFCIEIASTSLVSDTEMYRNAIQHFIDE SIGPYMYGLAPPSIPATSRNLLRELAGTVLEDVVQTSPAMAISGSQSGLLGSLPLTAAGVVSVELAHENSALLTGITTNA TTGLDEAFEAMQYGNIVSSEEPYYHWTMPRSIIPYEDQSALIPFQDMPNNPTSLLDFEMLGQLHSTDGAELSGKELQQRV ALERAPKQILPSTTTGYPSSNVFGSSWKGKEILEAENLEFAKKSPESRLLPQRNTYALGRLALSSSQSVLAELPRVDLQT SPAVPSISNLDTQILPSGWSSIHQMPLWHSLRSAFRAFGPLRSSTSSRIRKFPKRQPLIHQWVMRRLPNWETQRGRSQSD QNQRGVGSGNSDATLGNYYNPRSPNSEAHRRAERTRREKSKKKLDTLINIVPIITKRDKISVLSSTIEYIGHLRSRISNL EKEQEAALGATGAKEATTSVAKFRTGKELGSFNTEIAAGPSSSTTTPVVVEGILGGETMNINVETNYHARSLIQLLSILQ ELDLGIISVASVCENVRFRAAVCVKNSRKSRTTPDSLQATLLRVLEGNCGSE* |
CDS seq | >Pp3c11_25660V3.3 ATGACTCTACAACCGCGGAATTCCGCCTCCCAGCTGTTGGAGATGGAGATCGTTCGGCAGAAGCTGAAGGAATTAGTGAG CTTGGGATGGACCTACGGAGTACTCTGGAAGATTGGGCCTGATCGCAGGACCCCTGTATGGTATCAGGGCTATTTCAACG AATCCATGCAGGTCGACATTAGTCAAAAGCAGCAATTTGAATCCGTGTACAGACACTGTCGGTTTACACCGACTAGGCCA GGGTACGCCTACATAGCTTGGCATCGGCAAGCTCCGTGCTGGTGGACAGGACATAGCGAGCCGGTTCTCACCGACGAGAA CAAGGAGATGTTCTTAAGGCAAGCTGGAATTCAGACGCTAGTGTGCTTTCCAGGACGCGCTAAAATCGATGGGAGCTGCT TTTGCATCGAAATAGCCTCGACCTCACTGGTTTCGGATACCGAAATGTATCGGAATGCGATTCAACATTTTATCGACGAG TCCATTGGACCTTACATGTATGGCCTTGCACCGCCTTCGATTCCAGCAACGTCGAGGAATTTGCTGCGGGAGCTTGCAGG AACTGTATTGGAGGACGTTGTTCAGACTTCACCCGCCATGGCGATTTCAGGGAGTCAGTCTGGGCTATTGGGGAGTTTAC CACTAACAGCAGCTGGTGTCGTGTCCGTAGAATTAGCTCATGAGAACTCGGCACTTTTGACCGGCATAACGACCAACGCT ACAACTGGGTTAGACGAAGCATTCGAAGCCATGCAGTATGGCAACATTGTGAGTTCGGAGGAGCCTTACTACCATTGGAC CATGCCAAGAAGCATAATCCCTTATGAGGACCAATCTGCTTTGATTCCATTCCAGGACATGCCAAACAATCCTACTAGCC TACTGGATTTCGAAATGCTCGGACAGCTTCATTCCACAGATGGAGCCGAGCTGAGCGGAAAGGAACTTCAACAGAGAGTC GCTCTAGAACGGGCACCAAAACAGATACTGCCGTCAACTACGACGGGATACCCCTCAAGCAATGTGTTTGGCAGCTCCTG GAAAGGTAAAGAAATATTAGAAGCAGAGAATTTGGAATTCGCGAAAAAGTCTCCCGAAAGCAGATTATTGCCGCAACGGA ACACATATGCACTAGGAAGATTAGCATTAAGCTCAAGTCAAAGTGTTCTGGCAGAGCTGCCTAGAGTGGATTTGCAAACT TCTCCAGCGGTACCTAGTATATCGAATCTTGACACCCAAATTTTGCCTTCCGGTTGGAGCTCCATTCATCAAATGCCGCT GTGGCATAGTCTTCGATCTGCCTTTCGAGCATTCGGGCCTTTACGATCCTCCACATCTTCTCGAATCCGAAAATTTCCCA AAAGGCAGCCTCTAATTCATCAGTGGGTAATGAGAAGATTGCCTAATTGGGAGACACAGCGAGGACGGTCTCAATCGGAT CAGAATCAAAGAGGAGTTGGATCTGGTAATTCCGATGCCACGCTTGGAAACTATTATAACCCCAGAAGCCCGAACTCCGA GGCGCATAGACGAGCGGAGCGCACGCGGAGGGAGAAGTCCAAAAAGAAGCTGGATACTTTGATAAACATTGTGCCGATTA TCACTAAGAGGGACAAAATTTCGGTGCTCAGCAGCACCATTGAGTACATCGGGCACTTGCGTTCTAGAATCTCGAATCTT GAAAAGGAGCAAGAAGCTGCACTCGGGGCGACAGGAGCGAAAGAAGCGACGACATCGGTAGCTAAATTCAGGACGGGAAA GGAATTGGGTTCCTTCAACACGGAAATAGCTGCTGGCCCTTCGTCCTCCACAACAACGCCTGTTGTGGTGGAAGGCATAC TGGGTGGTGAAACAATGAACATCAACGTGGAAACTAATTACCATGCTCGGTCTCTAATTCAATTACTGAGCATATTGCAA GAGTTGGACCTCGGGATCATCAGTGTGGCGTCCGTTTGCGAGAACGTGCGATTCCGTGCCGCCGTTTGCGTCAAGAATTC AAGGAAATCGAGGACGACGCCCGATAGCCTGCAAGCGACGCTCCTCCGAGTTTTGGAAGGGAACTGTGGGTCCGAGTAG |
Microexon DNA seq | CAAGCTGGAATTCAG |
Microexon Amino Acid seq | QAGIQ |
Microexon-tag DNA Seq | CATAGCGAGCCGGTTCTCACCGACGAGAACAAGGAGATGTTCTTAAGGCAAGCTGGAATTCAGACGCTAGTGTGCTTTCCAGGACGCGCTAAAATCGATGGGAGCTGC |
Microexon-tag Amino Acid seq | HSEPVLTDENKEMFLRQAGIQTLVCFPGRAKIDGSC |
Transcript ID | Pp3c11_25660V3.3 |
Gene ID | Pp.3548 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 0.63 |
Motif start | 88 |
Motif end | 125 |
Protein seq | >Pp3c11_25660V3.3 MTLQPRNSASQLLEMEIVRQKLKELVSLGWTYGVLWKIGPDRRTPVWYQGYFNESMQVDISQKQQFESVYRHCRFTPTRP GYAYIAWHRQAPCWWTGHSEPVLTDENKEMFLRQAGIQTLVCFPGRAKIDGSCFCIEIASTSLVSDTEMYRNAIQHFIDE SIGPYMYGLAPPSIPATSRNLLRELAGTVLEDVVQTSPAMAISGSQSGLLGSLPLTAAGVVSVELAHENSALLTGITTNA TTGLDEAFEAMQYGNIVSSEEPYYHWTMPRSIIPYEDQSALIPFQDMPNNPTSLLDFEMLGQLHSTDGAELSGKELQQRV ALERAPKQILPSTTTGYPSSNVFGSSWKGKEILEAENLEFAKKSPESRLLPQRNTYALGRLALSSSQSVLAELPRVDLQT SPAVPSISNLDTQILPSGWSSIHQMPLWHSLRSAFRAFGPLRSSTSSRIRKFPKRQPLIHQWVMRRLPNWETQRGRSQSD QNQRGVGSGNSDATLGNYYNPRSPNSEAHRRAERTRREKSKKKLDTLINIVPIITKRDKISVLSSTIEYIGHLRSRISNL EKEQEAALGATGAKEATTSVAKFRTGKELGSFNTEIAAGPSSSTTTPVVVEGILGGETMNINVETNYHARSLIQLLSILQ ELDLGIISVASVCENVRFRAAVCVKNSRKSRTTPDSLQATLLRVLEGNCGSE* |
CDS seq | >Pp3c11_25660V3.3 ATGACTCTACAACCGCGGAATTCCGCCTCCCAGCTGTTGGAGATGGAGATCGTTCGGCAGAAGCTGAAGGAATTAGTGAG CTTGGGATGGACCTACGGAGTACTCTGGAAGATTGGGCCTGATCGCAGGACCCCTGTATGGTATCAGGGCTATTTCAACG AATCCATGCAGGTCGACATTAGTCAAAAGCAGCAATTTGAATCCGTGTACAGACACTGTCGGTTTACACCGACTAGGCCA GGGTACGCCTACATAGCTTGGCATCGGCAAGCTCCGTGCTGGTGGACAGGACATAGCGAGCCGGTTCTCACCGACGAGAA CAAGGAGATGTTCTTAAGGCAAGCTGGAATTCAGACGCTAGTGTGCTTTCCAGGACGCGCTAAAATCGATGGGAGCTGCT TTTGCATCGAAATAGCCTCGACCTCACTGGTTTCGGATACCGAAATGTATCGGAATGCGATTCAACATTTTATCGACGAG TCCATTGGACCTTACATGTATGGCCTTGCACCGCCTTCGATTCCAGCAACGTCGAGGAATTTGCTGCGGGAGCTTGCAGG AACTGTATTGGAGGACGTTGTTCAGACTTCACCCGCCATGGCGATTTCAGGGAGTCAGTCTGGGCTATTGGGGAGTTTAC CACTAACAGCAGCTGGTGTCGTGTCCGTAGAATTAGCTCATGAGAACTCGGCACTTTTGACCGGCATAACGACCAACGCT ACAACTGGGTTAGACGAAGCATTCGAAGCCATGCAGTATGGCAACATTGTGAGTTCGGAGGAGCCTTACTACCATTGGAC CATGCCAAGAAGCATAATCCCTTATGAGGACCAATCTGCTTTGATTCCATTCCAGGACATGCCAAACAATCCTACTAGCC TACTGGATTTCGAAATGCTCGGACAGCTTCATTCCACAGATGGAGCCGAGCTGAGCGGAAAGGAACTTCAACAGAGAGTC GCTCTAGAACGGGCACCAAAACAGATACTGCCGTCAACTACGACGGGATACCCCTCAAGCAATGTGTTTGGCAGCTCCTG GAAAGGTAAAGAAATATTAGAAGCAGAGAATTTGGAATTCGCGAAAAAGTCTCCCGAAAGCAGATTATTGCCGCAACGGA ACACATATGCACTAGGAAGATTAGCATTAAGCTCAAGTCAAAGTGTTCTGGCAGAGCTGCCTAGAGTGGATTTGCAAACT TCTCCAGCGGTACCTAGTATATCGAATCTTGACACCCAAATTTTGCCTTCCGGTTGGAGCTCCATTCATCAAATGCCGCT GTGGCATAGTCTTCGATCTGCCTTTCGAGCATTCGGGCCTTTACGATCCTCCACATCTTCTCGAATCCGAAAATTTCCCA AAAGGCAGCCTCTAATTCATCAGTGGGTAATGAGAAGATTGCCTAATTGGGAGACACAGCGAGGACGGTCTCAATCGGAT CAGAATCAAAGAGGAGTTGGATCTGGTAATTCCGATGCCACGCTTGGAAACTATTATAACCCCAGAAGCCCGAACTCCGA GGCGCATAGACGAGCGGAGCGCACGCGGAGGGAGAAGTCCAAAAAGAAGCTGGATACTTTGATAAACATTGTGCCGATTA TCACTAAGAGGGACAAAATTTCGGTGCTCAGCAGCACCATTGAGTACATCGGGCACTTGCGTTCTAGAATCTCGAATCTT GAAAAGGAGCAAGAAGCTGCACTCGGGGCGACAGGAGCGAAAGAAGCGACGACATCGGTAGCTAAATTCAGGACGGGAAA GGAATTGGGTTCCTTCAACACGGAAATAGCTGCTGGCCCTTCGTCCTCCACAACAACGCCTGTTGTGGTGGAAGGCATAC TGGGTGGTGAAACAATGAACATCAACGTGGAAACTAATTACCATGCTCGGTCTCTAATTCAATTACTGAGCATATTGCAA GAGTTGGACCTCGGGATCATCAGTGTGGCGTCCGTTTGCGAGAACGTGCGATTCCGTGCCGCCGTTTGCGTCAAGAATTC AAGGAAATCGAGGACGACGCCCGATAGCCTGCAAGCGACGCTCCTCCGAGTTTTGGAAGGGAACTGTGGGTCCGAGTAG |