
Microexon ID | Pp_11:1658889-1658895:+ |
Species | Physcomitrium patens | Coordinates | 11:1658889..1658895 |
Microexon Cluster ID | Unclassified |
Size | 7 |
Pp_11:1658889-1658895:+ does not have available information here.
Transcript ID | Pp3c11_2890V3.3 |
Protein ID | Pp3c11_2890V3.3 |
Gene ID | Pp3c11_2890 |
Gene Name | NA |
Pfam domain motif | FF |
Motif E-value | 0.00053 |
Motif start | 551 |
Motif end | 613 |
Protein seq | >Pp3c11_2890V3.3 MAATQGYWEVWNTAASHRQGPPQRPPFGPPTHVAAQRNTFNLNPNASNSAARPIFAPPTTPGAQYGAHSSQLQPNHGMLL SSNLARPNSNEDSNAGMLPSTPVSSGLHQGIPNNIVSSQQPPQQPSYHGYSSNIGMGPLQQMGPPWMQSAQQFQRPSYMV YPGNYPGPLQAQMRPLGPSVNAMPVGPAPGLLTSGQVAQRPVIWTQEHPGPPAARSPIMTTTTTTDSTRSPIGSSRRSVA LLDNQLNLSGSKTEKGPSQVAVDPADVWTAHKTDNGAVYYYNSVTAQSTYTRPDGFKGEPAKVTTHPTPVSWERLSPTDW ALVTTDDGKKYYYNTKSQASCWEVPSEVAELRMNQEEVSGKLVFESVPTGISPVDKSPVSFTLNVSVSAGGRETTGHKPG ADSALDLIKKKLQDAGAQVTVSPTTGTAPVAGNTLNGVSSVDASNGKGLGVDQTKDKPQKGDNKSSEESSDSEEEDPGAT KEEKVNEFKEMLKEKGVAPFSKWEKELPKIIFDPRFKAIPSHTERRSIFEHYVRTRADVERREKRAAQKAAIEGFKQLLE EAAKSSGVADNEVDIIIQDISHTTTYDSFVRKWGHDTRFEALERKHRESLLNDRVAPLRKAEEERVRAERVAAVAGFRAL VSEKGDINSTSRWSKVKENLRSDPRYKLVEREEREVLFNGIISELKAAEIEVERAAKAKKEEEKSKEKERDARKRKEREE QELERVRVKSRRKDAASAYQALLTEKIKDPETSWTEARTQLEKNLLGRASNSNIDATERERIFRVHIDGLYSRCVRDFRS LLSDLITPEAAAKHDEEGRTPLDSWHEAKKVLKLDPRYSKMPRRERESLWRKHVDDLQRRTKTTNPTSRDDNHFSTRRRA STPPRSHQRSRSLGRRFRR* |
CDS seq | >Pp3c11_2890V3.3 ATGGCTGCCACACAAGGTTACTGGGAAGTTTGGAATACAGCTGCTAGTCATCGTCAAGGGCCACCGCAACGTCCTCCTTT TGGGCCTCCCACGCATGTCGCTGCACAACGAAATACTTTTAATCTAAATCCTAACGCTAGTAACTCAGCTGCTCGACCTA TATTTGCCCCTCCCACGACACCTGGTGCTCAGTATGGTGCCCATTCTTCCCAATTGCAACCAAATCATGGCATGCTTCTG AGTTCCAATCTAGCTAGGCCTAATTCAAACGAAGATTCAAATGCAGGGATGTTGCCATCTACTCCAGTTTCTTCTGGATT ACACCAGGGTATTCCAAATAATATTGTCTCATCTCAGCAGCCCCCTCAGCAGCCATCCTATCATGGATACTCATCCAATA TTGGGATGGGGCCTCTGCAACAAATGGGACCCCCCTGGATGCAGTCAGCGCAACAATTCCAGCGTCCCTCGTACATGGTC TATCCCGGCAATTATCCAGGACCTCTCCAGGCACAGATGCGTCCCTTGGGACCGTCTGTCAATGCAATGCCAGTAGGACC TGCTCCAGGTCTTTTAACGTCTGGTCAAGTTGCTCAGCGTCCTGTGATCTGGACACAAGAGCATCCTGGGCCACCAGCTG CAAGGTCCCCTATAATGACGACGACGACGACGACTGATTCAACTAGGAGCCCAATTGGTAGTAGTAGACGTTCCGTTGCT CTGTTAGACAACCAGTTAAATCTGTCGGGTTCAAAGACAGAGAAGGGTCCAAGTCAGGTTGCTGTCGATCCTGCAGATGT GTGGACTGCTCATAAGACTGATAATGGAGCAGTTTATTATTATAATTCTGTCACTGCCCAGTCCACTTATACACGACCTG ATGGTTTCAAAGGGGAGCCAGCGAAGGTGACAACGCATCCCACGCCTGTCTCTTGGGAGCGTCTGAGTCCCACTGACTGG GCGCTAGTGACAACTGACGATGGCAAAAAGTACTACTATAACACAAAAAGTCAGGCAAGTTGTTGGGAAGTGCCTTCCGA AGTTGCTGAACTTCGTATGAATCAAGAAGAGGTTTCTGGGAAGCTGGTCTTTGAAAGCGTTCCTACTGGCATTTCTCCTG TAGATAAGAGTCCTGTATCTTTTACCCTCAACGTATCAGTATCAGCTGGTGGTCGTGAAACGACGGGGCACAAACCTGGT GCTGATTCTGCCTTAGACCTCATCAAGAAAAAACTGCAAGATGCAGGTGCCCAAGTGACGGTGTCACCAACAACTGGGAC CGCTCCAGTTGCAGGAAATACCTTAAATGGTGTATCGTCAGTGGATGCTAGTAATGGAAAGGGTCTGGGGGTTGACCAAA CAAAAGATAAGCCCCAGAAAGGTGATAATAAATCCTCAGAAGAATCATCTGATAGTGAAGAAGAGGATCCAGGGGCAACC AAGGAGGAGAAAGTTAATGAATTCAAGGAAATGCTGAAGGAGAAGGGAGTAGCCCCATTTTCGAAATGGGAAAAAGAACT GCCTAAAATCATTTTCGATCCACGATTCAAGGCTATTCCAAGTCATACCGAGAGGCGGTCTATTTTTGAACACTACGTGC GAACAAGGGCTGACGTTGAGCGAAGGGAGAAGCGGGCTGCACAAAAGGCTGCCATTGAAGGATTCAAGCAACTTTTGGAG GAAGCAGCAAAGTCTTCTGGAGTCGCTGATAACGAGGTTGATATTATTATCCAGGATATCTCGCACACAACTACGTATGA TAGTTTTGTGAGAAAATGGGGCCATGACACTCGCTTTGAAGCTCTGGAGCGGAAGCATCGAGAATCTTTGTTGAACGACA GGGTTGCTCCACTGAGGAAGGCTGAGGAGGAGAGAGTTAGAGCTGAACGTGTTGCTGCTGTGGCTGGCTTTCGAGCTCTT GTATCAGAGAAGGGTGATATCAATTCAACTAGTCGCTGGTCCAAGGTTAAAGAAAATCTACGTTCCGATCCTCGTTACAA GCTTGTTGAGCGGGAAGAAAGAGAAGTGCTGTTCAATGGTATTATTTCAGAATTGAAGGCAGCAGAGATTGAAGTGGAGA GAGCAGCTAAAGCTAAGAAGGAAGAGGAGAAATCGAAAGAGAAAGAACGAGATGCACGTAAGCGCAAGGAGCGGGAGGAA CAAGAGCTTGAGAGAGTGCGTGTAAAATCTCGTCGGAAGGATGCTGCATCAGCTTATCAAGCTCTTCTGACTGAGAAAAT CAAGGATCCTGAGACGTCTTGGACTGAAGCGCGGACCCAGTTAGAGAAGAATCTTTTGGGTCGTGCTTCTAATTCAAACA TTGATGCCACAGAGAGGGAGCGAATCTTTCGGGTGCATATTGATGGATTGTATAGTCGCTGTGTCCGAGACTTTCGGTCG CTCCTCTCAGATCTGATCACTCCCGAAGCTGCTGCCAAGCACGATGAGGAGGGGAGAACACCACTGGACTCTTGGCACGA AGCTAAGAAGGTATTAAAACTAGACCCGCGTTACAGCAAAATGCCGCGACGAGAGCGCGAGTCGTTGTGGAGAAAGCACG TTGATGACTTGCAGCGGCGGACAAAAACAACAAATCCAACCAGCAGGGATGATAATCACTTCTCTACCCGCAGGAGGGCT TCGACACCTCCCAGATCTCATCAGAGATCGCGCTCACTTGGGAGACGTTTTCGACGATGA |
Microexon DNA seq | TCTTCTG |
Microexon Amino Acid seq | SSG |
Microexon-tag DNA Seq | CAAAAGGCTGCCATTGAAGGATTCAAGCAACTTTTGGAGGAAGCAGCAAAGTCTTCTGGAGTCGCTGATAACGAGGTTGATATTATTATCCAGGATATCTCGCACACA |
Microexon-tag Amino Acid seq | QKAAIEGFKQLLEEAAKSSGVADNEVDIIIQDISHT |
Transcript ID | Pp3c11_2890V3.3 |
Gene ID | Pp.2695 |
Gene Name | NA |
Pfam domain motif | FF |
Motif E-value | 0.00053 |
Motif start | 551 |
Motif end | 613 |
Protein seq | >Pp3c11_2890V3.3 MAATQGYWEVWNTAASHRQGPPQRPPFGPPTHVAAQRNTFNLNPNASNSAARPIFAPPTTPGAQYGAHSSQLQPNHGMLL SSNLARPNSNEDSNAGMLPSTPVSSGLHQGIPNNIVSSQQPPQQPSYHGYSSNIGMGPLQQMGPPWMQSAQQFQRPSYMV YPGNYPGPLQAQMRPLGPSVNAMPVGPAPGLLTSGQVAQRPVIWTQEHPGPPAARSPIMTTTTTTDSTRSPIGSSRRSVA LLDNQLNLSGSKTEKGPSQVAVDPADVWTAHKTDNGAVYYYNSVTAQSTYTRPDGFKGEPAKVTTHPTPVSWERLSPTDW ALVTTDDGKKYYYNTKSQASCWEVPSEVAELRMNQEEVSGKLVFESVPTGISPVDKSPVSFTLNVSVSAGGRETTGHKPG ADSALDLIKKKLQDAGAQVTVSPTTGTAPVAGNTLNGVSSVDASNGKGLGVDQTKDKPQKGDNKSSEESSDSEEEDPGAT KEEKVNEFKEMLKEKGVAPFSKWEKELPKIIFDPRFKAIPSHTERRSIFEHYVRTRADVERREKRAAQKAAIEGFKQLLE EAAKSSGVADNEVDIIIQDISHTTTYDSFVRKWGHDTRFEALERKHRESLLNDRVAPLRKAEEERVRAERVAAVAGFRAL VSEKGDINSTSRWSKVKENLRSDPRYKLVEREEREVLFNGIISELKAAEIEVERAAKAKKEEEKSKEKERDARKRKEREE QELERVRVKSRRKDAASAYQALLTEKIKDPETSWTEARTQLEKNLLGRASNSNIDATERERIFRVHIDGLYSRCVRDFRS LLSDLITPEAAAKHDEEGRTPLDSWHEAKKVLKLDPRYSKMPRRERESLWRKHVDDLQRRTKTTNPTSRDDNHFSTRRRA STPPRSHQRSRSLGRRFRR* |
CDS seq | >Pp3c11_2890V3.3 ATGGCTGCCACACAAGGTTACTGGGAAGTTTGGAATACAGCTGCTAGTCATCGTCAAGGGCCACCGCAACGTCCTCCTTT TGGGCCTCCCACGCATGTCGCTGCACAACGAAATACTTTTAATCTAAATCCTAACGCTAGTAACTCAGCTGCTCGACCTA TATTTGCCCCTCCCACGACACCTGGTGCTCAGTATGGTGCCCATTCTTCCCAATTGCAACCAAATCATGGCATGCTTCTG AGTTCCAATCTAGCTAGGCCTAATTCAAACGAAGATTCAAATGCAGGGATGTTGCCATCTACTCCAGTTTCTTCTGGATT ACACCAGGGTATTCCAAATAATATTGTCTCATCTCAGCAGCCCCCTCAGCAGCCATCCTATCATGGATACTCATCCAATA TTGGGATGGGGCCTCTGCAACAAATGGGACCCCCCTGGATGCAGTCAGCGCAACAATTCCAGCGTCCCTCGTACATGGTC TATCCCGGCAATTATCCAGGACCTCTCCAGGCACAGATGCGTCCCTTGGGACCGTCTGTCAATGCAATGCCAGTAGGACC TGCTCCAGGTCTTTTAACGTCTGGTCAAGTTGCTCAGCGTCCTGTGATCTGGACACAAGAGCATCCTGGGCCACCAGCTG CAAGGTCCCCTATAATGACGACGACGACGACGACTGATTCAACTAGGAGCCCAATTGGTAGTAGTAGACGTTCCGTTGCT CTGTTAGACAACCAGTTAAATCTGTCGGGTTCAAAGACAGAGAAGGGTCCAAGTCAGGTTGCTGTCGATCCTGCAGATGT GTGGACTGCTCATAAGACTGATAATGGAGCAGTTTATTATTATAATTCTGTCACTGCCCAGTCCACTTATACACGACCTG ATGGTTTCAAAGGGGAGCCAGCGAAGGTGACAACGCATCCCACGCCTGTCTCTTGGGAGCGTCTGAGTCCCACTGACTGG GCGCTAGTGACAACTGACGATGGCAAAAAGTACTACTATAACACAAAAAGTCAGGCAAGTTGTTGGGAAGTGCCTTCCGA AGTTGCTGAACTTCGTATGAATCAAGAAGAGGTTTCTGGGAAGCTGGTCTTTGAAAGCGTTCCTACTGGCATTTCTCCTG TAGATAAGAGTCCTGTATCTTTTACCCTCAACGTATCAGTATCAGCTGGTGGTCGTGAAACGACGGGGCACAAACCTGGT GCTGATTCTGCCTTAGACCTCATCAAGAAAAAACTGCAAGATGCAGGTGCCCAAGTGACGGTGTCACCAACAACTGGGAC CGCTCCAGTTGCAGGAAATACCTTAAATGGTGTATCGTCAGTGGATGCTAGTAATGGAAAGGGTCTGGGGGTTGACCAAA CAAAAGATAAGCCCCAGAAAGGTGATAATAAATCCTCAGAAGAATCATCTGATAGTGAAGAAGAGGATCCAGGGGCAACC AAGGAGGAGAAAGTTAATGAATTCAAGGAAATGCTGAAGGAGAAGGGAGTAGCCCCATTTTCGAAATGGGAAAAAGAACT GCCTAAAATCATTTTCGATCCACGATTCAAGGCTATTCCAAGTCATACCGAGAGGCGGTCTATTTTTGAACACTACGTGC GAACAAGGGCTGACGTTGAGCGAAGGGAGAAGCGGGCTGCACAAAAGGCTGCCATTGAAGGATTCAAGCAACTTTTGGAG GAAGCAGCAAAGTCTTCTGGAGTCGCTGATAACGAGGTTGATATTATTATCCAGGATATCTCGCACACAACTACGTATGA TAGTTTTGTGAGAAAATGGGGCCATGACACTCGCTTTGAAGCTCTGGAGCGGAAGCATCGAGAATCTTTGTTGAACGACA GGGTTGCTCCACTGAGGAAGGCTGAGGAGGAGAGAGTTAGAGCTGAACGTGTTGCTGCTGTGGCTGGCTTTCGAGCTCTT GTATCAGAGAAGGGTGATATCAATTCAACTAGTCGCTGGTCCAAGGTTAAAGAAAATCTACGTTCCGATCCTCGTTACAA GCTTGTTGAGCGGGAAGAAAGAGAAGTGCTGTTCAATGGTATTATTTCAGAATTGAAGGCAGCAGAGATTGAAGTGGAGA GAGCAGCTAAAGCTAAGAAGGAAGAGGAGAAATCGAAAGAGAAAGAACGAGATGCACGTAAGCGCAAGGAGCGGGAGGAA CAAGAGCTTGAGAGAGTGCGTGTAAAATCTCGTCGGAAGGATGCTGCATCAGCTTATCAAGCTCTTCTGACTGAGAAAAT CAAGGATCCTGAGACGTCTTGGACTGAAGCGCGGACCCAGTTAGAGAAGAATCTTTTGGGTCGTGCTTCTAATTCAAACA TTGATGCCACAGAGAGGGAGCGAATCTTTCGGGTGCATATTGATGGATTGTATAGTCGCTGTGTCCGAGACTTTCGGTCG CTCCTCTCAGATCTGATCACTCCCGAAGCTGCTGCCAAGCACGATGAGGAGGGGAGAACACCACTGGACTCTTGGCACGA AGCTAAGAAGGTATTAAAACTAGACCCGCGTTACAGCAAAATGCCGCGACGAGAGCGCGAGTCGTTGTGGAGAAAGCACG TTGATGACTTGCAGCGGCGGACAAAAACAACAAATCCAACCAGCAGGGATGATAATCACTTCTCTACCCGCAGGAGGGCT TCGACACCTCCCAGATCTCATCAGAGATCGCGCTCACTTGGGAGACGTTTTCGACGATGA |