
Microexon ID | Ha_5:121913976-121913978:- |
Species | Helianthus annuus | Coordinates | 5:121913976..121913978 |
Microexon Cluster ID | Unclassified |
Size | 3 |
Ha_5:121913976-121913978:- does not have available information here.
Transcript ID | OTG25119 |
Protein ID | OTG25119 |
Gene ID | HannXRQ_Chr05g0144181 |
Gene Name | PTB3 |
Pfam domain motif | RRM_8 |
Motif E-value | 1.9e-20 |
Motif start | 90 |
Motif end | 167 |
Protein seq | >OTG25119 MLVMRFRRDCPDLLQLFQPFGVINKLVMLRAKNQALLQMQDVPAAVSAMQFYANVQPSIRGRNVYVQFSSHQELTTMEQN TQGRVDEEPNRILLVTIHHMLYPITVEVLHQVFSPHGYVEKIVTFQKSAGFQALIQFQLRQSAVVARNSLQGRNIYDGCC QLDIQFSNLEELQVNYNNERSRDFTNPSLPSEQKGRPSQPGYGDAGAGYPQMNNAAAIAAAFGGGLPSGITGTNDRCTVL ASNLNPDRIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGATLFGKRLEVNFSKHPNITMGAET HEYLNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDVTEDEIISHLEEHGSIVNTKVFEMNGKKQALVMFENEEQATEA LVCKHATTLADSMIRISFSQLQTI* |
CDS seq | >OTG25119 ATGTTGGTCATGAGATTTCGGAGGGATTGTCCTGATCTGCTTCAGCTATTCCAGCCATTTGGAGTCATTAATAAACTAGT AATGCTTCGTGCAAAAAACCAGGCTCTCCTACAAATGCAAGATGTTCCTGCTGCTGTCAGTGCAATGCAATTTTATGCCA ATGTGCAGCCAAGCATAAGGGGAAGAAATGTTTATGTTCAGTTTTCATCTCATCAAGAGCTAACCACAATGGAGCAAAAT ACTCAAGGACGAGTAGACGAGGAGCCCAATCGCATTCTTTTGGTCACCATTCATCATATGCTGTACCCTATAACTGTGGA AGTCCTGCATCAAGTTTTTTCTCCTCATGGATATGTCGAGAAAATTGTCACCTTTCAAAAGTCAGCTGGTTTTCAAGCAC TAATTCAATTTCAGTTACGGCAAAGTGCTGTGGTTGCAAGAAATTCTCTTCAGGGGAGAAATATTTATGATGGTTGCTGC CAACTAGATATTCAGTTCTCAAATCTTGAAGAGTTGCAAGTCAACTACAATAATGAGCGGTCTAGGGATTTTACAAACCC ATCACTACCCTCAGAACAGAAGGGCAGACCCTCCCAACCTGGATATGGAGATGCGGGAGCTGGATATCCACAGATGAACA ACGCGGCTGCAATTGCCGCTGCATTTGGAGGCGGCTTGCCTTCCGGAATCACCGGGACCAACGACAGATGCACTGTTCTT GCATCTAATTTAAATCCTGATCGGATAGACGAGGACAAGCTGTTCAACTTGTTTTCTTTATATGGGAACATTGTGAGAAT CAAGCTGCTTCGCAACAAACCAGATCATGCTCTTGTTCAGATGGGTGACGGGTTTCAGGCTGAGTTGGCAGTACACTTTT TGAAGGGAGCCACTCTGTTTGGGAAGCGGTTGGAGGTTAATTTCTCAAAGCATCCTAATATTACAATGGGTGCTGAAACA CACGAGTATCTAAACTCCAATTTGAACCGGTTCAACCGCAATGCTGCTAAAAACTACCGTTACTGTTGCTCACCAACCAA AATGATCCACCTATCGACCCTACCGCAGGATGTGACGGAAGACGAGATTATATCCCATCTTGAAGAACACGGGAGCATCG TCAACACCAAAGTGTTTGAAATGAACGGTAAAAAACAGGCTCTTGTTATGTTTGAAAACGAGGAACAAGCAACTGAAGCA CTTGTGTGCAAGCATGCAACTACACTTGCAGATTCTATGATTCGTATATCCTTTTCTCAGTTGCAGACAATTTGA |
Microexon DNA seq | GAG |
Microexon Amino Acid seq | E |
Microexon-tag DNA Seq | TCTCATCAAGAGCTAACCACAATGGAGCAAAATACTCAAGGACGAGTAGACGAGGAGCCCAATCGCATTCTTTTGGTCACCATTCATCATATGCTGTACCCTATAACT |
Microexon-tag Amino Acid seq | SHQELTTMEQNTQGRVDEEPNRILLVTIHHMLYPIT |
Transcript ID | Ha.44799.1 |
Gene ID | Ha.44799 |
Gene Name | PTB3 |
Pfam domain motif | RRM_8 |
Motif E-value | 2e-20 |
Motif start | 99 |
Motif end | 176 |
Protein seq | >Ha.44799.1 MAEPSKVIHVRNVGHEISEPDLLQLFQPFGVINKLVMLRAKNQALLQMQDVPAAVSAMQFYANVQPSIRGRNVYVQFSSH QELTTMEQNTQGRVDEEPNRILLVTIHHMLYPITVEVLHQVFSPHGYVEKIVTFQKSAGFQALIQFQLRQSAVVARNSLQ GRNIYDGCCQLDIQFSNLEELQVNYNNERSRDFTNPSLPSEQKGRPSQPGYGDAGAGYPQMNNAAAIAAAFGGGLPSGIT GTNDRCTVLASNLNPDRIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGATLFGKRLEVNFSKH PNITMGAETHEYLNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDVTEDEIISHLEEHGSIVNTKVFEMNGKKQALVMF ENEEQATEALVCKHATTLADSMIRISFSQLQTI* |
CDS seq | >Ha.44799.1 ATGGCAGAGCCTTCCAAAGTCATTCACGTCCGGAATGTTGGTCATGAGATTTCGGAGCCTGATCTGCTTCAGCTATTCCA GCCATTTGGAGTCATTAATAAACTAGTAATGCTTCGTGCAAAAAACCAGGCTCTCCTACAAATGCAAGATGTTCCTGCTG CTGTCAGTGCAATGCAATTTTATGCCAATGTGCAGCCAAGCATAAGGGGAAGAAATGTTTATGTTCAGTTTTCATCTCAT CAAGAGCTAACCACAATGGAGCAAAATACTCAAGGACGAGTAGACGAGGAGCCCAATCGCATTCTTTTGGTCACCATTCA TCATATGCTGTACCCTATAACTGTGGAAGTCCTGCATCAAGTTTTTTCTCCTCATGGATATGTCGAGAAAATTGTCACCT TTCAAAAGTCAGCTGGTTTTCAAGCACTAATTCAATTTCAGTTACGGCAAAGTGCTGTGGTTGCAAGAAATTCTCTTCAG GGGAGAAATATTTATGATGGTTGCTGCCAACTAGATATTCAGTTCTCAAATCTTGAAGAGTTGCAAGTCAACTACAATAA TGAGCGGTCTAGGGATTTTACAAACCCATCACTACCCTCAGAACAGAAGGGCAGACCCTCCCAACCTGGATATGGAGATG CGGGAGCTGGATATCCACAGATGAACAACGCGGCTGCAATTGCCGCTGCATTTGGAGGCGGCTTGCCTTCCGGAATCACC GGGACCAACGACAGATGCACTGTTCTTGCATCTAATTTAAATCCTGATCGGATAGACGAGGACAAGCTGTTCAACTTGTT TTCTTTATATGGGAACATTGTGAGAATCAAGCTGCTTCGCAACAAACCAGATCATGCTCTTGTTCAGATGGGTGACGGGT TTCAGGCTGAGTTGGCAGTACACTTTTTGAAGGGAGCCACTCTGTTTGGGAAGCGGTTGGAGGTTAATTTCTCAAAGCAT CCTAATATTACAATGGGTGCTGAAACACACGAGTATCTAAACTCCAATTTGAACCGGTTCAACCGCAATGCTGCTAAAAA CTACCGTTACTGTTGCTCACCAACCAAAATGATCCACCTATCGACCCTACCGCAGGATGTGACGGAAGACGAGATTATAT CCCATCTTGAAGAACACGGGAGCATCGTCAACACCAAAGTGTTTGAAATGAACGGTAAAAAACAGGCTCTTGTTATGTTT GAAAACGAGGAACAAGCAACTGAAGCACTTGTGTGCAAGCATGCAACTACACTTGCAGATTCTATGATTCGTATATCCTT TTCTCAGTTGCAGACAATTTGA |