
Microexon ID | Ha_4:161376957-161376966:- |
Species | Helianthus annuus | Coordinates | 4:161376957..161376966 |
Microexon Cluster ID | Unclassified |
Size | 10 |
Ha_4:161376957-161376966:- does not have available information here.
Ha_4:161376957-161376966:- does not have available information here.
Microexon DNA seq | AGCTATGCAG |
Microexon Amino Acid seq | IAMQ |
Microexon-tag DNA Seq | AAGGAAAACCGGCTCCAAGAGAAATCGCTCCTATGCTTGTATCTAATCATAGCTATGCAGGTGATATATGTGAATCGGTTCTCATATCAATCACGCAAGCAGGCTGTA |
Microexon-tag Amino Acid seq | KENRLQEKSLLCLYLIIAMQVIYVNRFSYQSRKQAV |
Transcript ID | Ha.42406.2 |
Gene ID | Ha.42406 |
Gene Name | PCAT1 |
Pfam domain motif | Acyltransferase |
Motif E-value | 2.8e-06 |
Motif start | 47 |
Motif end | 116 |
Protein seq | >Ha.42406.2 MQCPGGGVGLCMLQGYVGEPFFFLLATIGLKEKENRLQEKSLLCLYLIIAMQVIYVNRFSYQSRKQAVHEIKRKASTNTY PRVLLFPEGTTTNGRQLISFQLGAFIPGLPIQPVVIRYPHVHFDQSWGHISLPALMFRMFMQFHNFMEVEYLPVISPSQN HKESPARFAERTGRAMALALNVAQTYHSFADYALLSKAVEAGQERFSPFMVEMAQVQKLYQLSSSEAVAFLGRFLAMNPD SSGFVQYQDFIRVLRLKHSRLSEQIFGFIDADKDGSITFKEFLVGSIHVLKLPLFPRACEAAFNESDEDKDHYISLLEFG GSTSAVIPDLTTSEIQALFELFDVDGDGRISKDDFITCLRRNPLLIAHFNHLFMHKDLDAERGLDEMV* |
CDS seq | >Ha.42406.2 ATGCAATGCCCAGGTGGAGGTGTAGGGTTATGTATGTTACAAGGTTATGTGGGAGAGCCATTCTTTTTTCTTTTGGCTAC CATTGGATTAAAAGAAAAGGAAAACCGGCTCCAAGAGAAATCGCTCCTATGCTTGTATCTAATCATAGCTATGCAGGTGA TATATGTGAATCGGTTCTCATATCAATCACGCAAGCAGGCTGTACATGAAATAAAGAGAAAGGCCTCAACCAATACATAT CCTCGAGTACTTTTGTTTCCTGAGGGAACCACAACGAATGGAAGACAGCTTATTTCGTTCCAACTCGGTGCATTTATTCC CGGTTTGCCCATACAACCGGTGGTCATTCGCTATCCTCATGTACATTTTGATCAATCATGGGGCCATATCTCTTTGCCGG CCCTCATGTTTAGAATGTTCATGCAGTTCCACAATTTCATGGAGGTTGAATATCTTCCTGTTATTTCACCGTCACAAAAT CACAAGGAAAGTCCTGCTCGGTTTGCTGAGAGGACTGGGAGAGCCATGGCTTTAGCTCTAAATGTTGCGCAAACATACCA TTCTTTTGCCGATTATGCACTTCTTTCAAAGGCAGTTGAAGCTGGACAGGAGAGGTTTTCGCCCTTTATGGTTGAAATGG CGCAAGTTCAAAAATTATATCAGTTGAGCTCTTCAGAAGCAGTAGCGTTCTTGGGAAGATTTCTTGCAATGAATCCGGAC AGCAGTGGATTTGTTCAATATCAAGATTTCATAAGGGTTTTAAGATTGAAACATTCTCGCCTTTCTGAACAGATTTTCGG ATTTATTGACGCTGACAAGGATGGAAGTATAACTTTCAAAGAGTTCTTGGTCGGATCTATTCACGTTCTGAAGCTGCCAT TATTCCCACGAGCATGTGAAGCAGCATTTAATGAAAGCGATGAAGACAAAGATCATTACATTTCATTGTTGGAGTTCGGA GGTTCCACCAGCGCAGTTATCCCGGACTTGACCACTAGCGAGATACAAGCGCTCTTCGAATTGTTTGACGTTGATGGTGA TGGTAGGATAAGCAAGGATGATTTTATTACTTGCTTAAGAAGAAATCCTTTGCTCATAGCACATTTCAATCACCTTTTCA TGCATAAAGATTTGGATGCAGAAAGAGGTTTAGATGAAATGGTTTGA |