Microexon ID Ta_5D:2137905-2137919:+
Species Triticum   Aestivum
Coordinates 5D:2137905..2137919
Microexon Cluster ID MEP45
Size 15
Phase 2
Pfam Domain Motif RPE65
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 47,15,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTTTGATGGAGATGG
Microexon Amino Acid seq WFDGDG
Microexon-tag DNA Seq AGGGTGGGGCCTAATCCGAAGTTTGTCCCTGTTGCAGGCTATCACTGGTTTGATGGAGATGGAATGATCCATGCAATGCGTATTAAAGATGGCAAAGCTACATATGTA
Microexon-tag Amino Acid Seq RVGPNPKFVPVAGYHWFDGDGMIHAMRIKDGKATYV
Microexon-tag spanning region2137631-2138370
Microexon-tag prediction score0.9758
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5D02G001900.1x
Reference Transcript ID TraesCS5D02G001900.1
Gene ID TraesCS5D02G001900
Gene Name NA
Transcript ID TraesCS5D02G001900.1
Protein ID
Gene ID TraesCS5D02G001900
Gene Name
Pfam domain motif RPE65
Motif E-value 6.20E-142
Motif start 59
Motif end 537
Protein seq >TraesCS5D02G001900.1
MGEAVAAAEDALKKEGAVVVPAPRPSKGVASWAVDLLERLAVRLGHDKAKPLHWLSGNFAPVRDETPPAAGLPVRGHLPE
CLNGEFVRVGPNPKFVPVAGYHWFDGDGMIHAMRIKDGKATYVSRYVKTSRLKQEEYFGGAKFMKIGDLKGFFGLFMVQM
QALRKKLKILDVTYGFGTANTALIYHHGKLLALSEADKPYVVKVLEDGDLQTLGLLDYDKRLKHSFTAHPKVDPFTDEMF
TFGYSHEPPYCTYRVITKDGVMLDPVPITIPESVMMHDFAITENYSIFMDLPLLFRPKEMVKNGEFIYKFDPTKKGRFGI
LQRYEKDEKTIRWFELPNCFIFHNANAWEEGDEVVLITCRLENPDLDKVNGTQNEKLENFGNELYEMRFNMKTGAASQKQ
LSVSAVDFPRVNESYTGRKQRYVYCTILDSIAKVTGIIKFDLHAEPESGKKQLEVGGNVMGIYDLGPGRFGSEAVFVPKE
PGVSGEEDDGYLIFFVHDENTGKSEVNVIDAKTMSPDPVAVVELPNRVPYGFHAFFVNEEQLVHQQAEV*
CDS seq >TraesCS5D02G001900.1
ATGGGAGAAGCGGTGGCCGCGGCGGAGGACGCCCTGAAGAAGGAGGGGGCGGTGGTGGTGCCGGCGCCGCGGCCGAGCAA
GGGCGTGGCGTCCTGGGCGGTGGACCTGCTGGAGCGCCTCGCCGTCCGCCTCGGCCACGACAAGGCCAAGCCGCTCCACT
GGCTCTCCGGCAACTTCGCCCCCGTCCGCGACGAGACCCCGCCCGCCGCCGGCCTCCCCGTCCGCGGCCACCTCCCGGAG
TGCTTGAATGGAGAGTTTGTCAGGGTGGGGCCTAATCCGAAGTTTGTCCCTGTTGCAGGCTATCACTGGTTTGATGGAGA
TGGAATGATCCATGCAATGCGTATTAAAGATGGCAAAGCTACATATGTATCAAGATACGTGAAGACTTCTCGCCTCAAGC
AAGAAGAATATTTTGGTGGAGCAAAGTTTATGAAGATTGGAGATCTAAAGGGCTTTTTTGGATTGTTTATGGTTCAAATG
CAAGCACTTAGGAAAAAACTGAAAATCCTGGATGTTACTTATGGATTTGGGACAGCTAATACCGCACTTATATATCATCA
TGGCAAACTACTGGCCCTGTCAGAAGCAGATAAACCCTATGTTGTTAAGGTCCTTGAAGATGGAGACCTGCAAACTCTTG
GGTTGTTGGATTATGACAAGAGGTTGAAACATTCTTTCACTGCTCATCCCAAGGTTGATCCATTTACAGATGAAATGTTC
ACCTTTGGGTACTCGCATGAACCTCCTTATTGTACATACCGGGTCATCACCAAGGATGGAGTTATGCTTGATCCTGTGCC
AATAACAATACCAGAGTCTGTAATGATGCATGACTTTGCAATCACAGAGAACTATTCCATATTTATGGACCTGCCTTTGT
TGTTTCGACCAAAGGAAATGGTGAAGAATGGTGAATTCATCTACAAGTTCGACCCTACAAAGAAAGGTCGTTTCGGCATA
CTCCAGCGTTATGAAAAGGATGAAAAAACCATCAGATGGTTTGAACTCCCCAATTGCTTCATTTTCCACAATGCTAACGC
CTGGGAAGAGGGCGACGAAGTTGTTCTGATTACCTGCCGCCTTGAGAACCCAGATCTGGACAAGGTGAACGGCACCCAAA
ACGAGAAGCTCGAGAACTTCGGGAATGAGCTGTATGAGATGAGATTCAACATGAAAACCGGCGCTGCTTCACAGAAGCAA
CTGTCGGTCTCTGCTGTAGACTTTCCTCGAGTCAACGAGAGCTATACCGGCAGAAAGCAGAGGTACGTGTACTGCACGAT
ACTCGACAGCATAGCAAAGGTGACTGGCATCATCAAATTTGACCTGCACGCCGAGCCAGAGAGCGGCAAGAAGCAGCTTG
AAGTTGGGGGGAATGTGATGGGCATATATGACCTGGGACCTGGTAGGTTTGGTTCAGAGGCTGTCTTTGTGCCCAAGGAG
CCCGGTGTTTCTGGGGAAGAAGACGATGGCTATCTGATATTCTTTGTGCACGATGAGAACACAGGGAAATCTGAAGTGAA
TGTGATTGATGCCAAGACCATGTCTCCTGATCCGGTGGCGGTTGTCGAGCTGCCGAACCGGGTTCCTTACGGGTTCCACG
CCTTCTTTGTCAACGAGGAACAACTGGTACATCAGCAAGCAGAGGTGTGA
Ta_5D:2137905-2137919:+ does not have available information here.