
Microexon ID | Ta_5D:2137905-2137919:+ |
Species | Triticum Aestivum | Coordinates | 5D:2137905..2137919 |
Microexon Cluster ID | MEP45 |
Size | 15 |
Phase | 2 |
Pfam Domain Motif | RPE65 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTGATGGAGATGG |
Microexon Amino Acid seq | WFDGDG |
Microexon-tag DNA Seq | AGGGTGGGGCCTAATCCGAAGTTTGTCCCTGTTGCAGGCTATCACTGGTTTGATGGAGATGGAATGATCCATGCAATGCGTATTAAAGATGGCAAAGCTACATATGTA |
Microexon-tag Amino Acid Seq | RVGPNPKFVPVAGYHWFDGDGMIHAMRIKDGKATYV |
Microexon-tag spanning region | 2137631-2138370 |
Microexon-tag prediction score | 0.9758 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5D02G001900.1x |
Reference Transcript ID | TraesCS5D02G001900.1 |
Gene ID | TraesCS5D02G001900 |
Gene Name | NA |
Transcript ID | TraesCS5D02G001900.1 |
Protein ID | |
Gene ID | TraesCS5D02G001900 |
Gene Name | |
Pfam domain motif | RPE65 |
Motif E-value | 6.20E-142 |
Motif start | 59 |
Motif end | 537 |
Protein seq | >TraesCS5D02G001900.1 MGEAVAAAEDALKKEGAVVVPAPRPSKGVASWAVDLLERLAVRLGHDKAKPLHWLSGNFAPVRDETPPAAGLPVRGHLPE CLNGEFVRVGPNPKFVPVAGYHWFDGDGMIHAMRIKDGKATYVSRYVKTSRLKQEEYFGGAKFMKIGDLKGFFGLFMVQM QALRKKLKILDVTYGFGTANTALIYHHGKLLALSEADKPYVVKVLEDGDLQTLGLLDYDKRLKHSFTAHPKVDPFTDEMF TFGYSHEPPYCTYRVITKDGVMLDPVPITIPESVMMHDFAITENYSIFMDLPLLFRPKEMVKNGEFIYKFDPTKKGRFGI LQRYEKDEKTIRWFELPNCFIFHNANAWEEGDEVVLITCRLENPDLDKVNGTQNEKLENFGNELYEMRFNMKTGAASQKQ LSVSAVDFPRVNESYTGRKQRYVYCTILDSIAKVTGIIKFDLHAEPESGKKQLEVGGNVMGIYDLGPGRFGSEAVFVPKE PGVSGEEDDGYLIFFVHDENTGKSEVNVIDAKTMSPDPVAVVELPNRVPYGFHAFFVNEEQLVHQQAEV* |
CDS seq | >TraesCS5D02G001900.1 ATGGGAGAAGCGGTGGCCGCGGCGGAGGACGCCCTGAAGAAGGAGGGGGCGGTGGTGGTGCCGGCGCCGCGGCCGAGCAA GGGCGTGGCGTCCTGGGCGGTGGACCTGCTGGAGCGCCTCGCCGTCCGCCTCGGCCACGACAAGGCCAAGCCGCTCCACT GGCTCTCCGGCAACTTCGCCCCCGTCCGCGACGAGACCCCGCCCGCCGCCGGCCTCCCCGTCCGCGGCCACCTCCCGGAG TGCTTGAATGGAGAGTTTGTCAGGGTGGGGCCTAATCCGAAGTTTGTCCCTGTTGCAGGCTATCACTGGTTTGATGGAGA TGGAATGATCCATGCAATGCGTATTAAAGATGGCAAAGCTACATATGTATCAAGATACGTGAAGACTTCTCGCCTCAAGC AAGAAGAATATTTTGGTGGAGCAAAGTTTATGAAGATTGGAGATCTAAAGGGCTTTTTTGGATTGTTTATGGTTCAAATG CAAGCACTTAGGAAAAAACTGAAAATCCTGGATGTTACTTATGGATTTGGGACAGCTAATACCGCACTTATATATCATCA TGGCAAACTACTGGCCCTGTCAGAAGCAGATAAACCCTATGTTGTTAAGGTCCTTGAAGATGGAGACCTGCAAACTCTTG GGTTGTTGGATTATGACAAGAGGTTGAAACATTCTTTCACTGCTCATCCCAAGGTTGATCCATTTACAGATGAAATGTTC ACCTTTGGGTACTCGCATGAACCTCCTTATTGTACATACCGGGTCATCACCAAGGATGGAGTTATGCTTGATCCTGTGCC AATAACAATACCAGAGTCTGTAATGATGCATGACTTTGCAATCACAGAGAACTATTCCATATTTATGGACCTGCCTTTGT TGTTTCGACCAAAGGAAATGGTGAAGAATGGTGAATTCATCTACAAGTTCGACCCTACAAAGAAAGGTCGTTTCGGCATA CTCCAGCGTTATGAAAAGGATGAAAAAACCATCAGATGGTTTGAACTCCCCAATTGCTTCATTTTCCACAATGCTAACGC CTGGGAAGAGGGCGACGAAGTTGTTCTGATTACCTGCCGCCTTGAGAACCCAGATCTGGACAAGGTGAACGGCACCCAAA ACGAGAAGCTCGAGAACTTCGGGAATGAGCTGTATGAGATGAGATTCAACATGAAAACCGGCGCTGCTTCACAGAAGCAA CTGTCGGTCTCTGCTGTAGACTTTCCTCGAGTCAACGAGAGCTATACCGGCAGAAAGCAGAGGTACGTGTACTGCACGAT ACTCGACAGCATAGCAAAGGTGACTGGCATCATCAAATTTGACCTGCACGCCGAGCCAGAGAGCGGCAAGAAGCAGCTTG AAGTTGGGGGGAATGTGATGGGCATATATGACCTGGGACCTGGTAGGTTTGGTTCAGAGGCTGTCTTTGTGCCCAAGGAG CCCGGTGTTTCTGGGGAAGAAGACGATGGCTATCTGATATTCTTTGTGCACGATGAGAACACAGGGAAATCTGAAGTGAA TGTGATTGATGCCAAGACCATGTCTCCTGATCCGGTGGCGGTTGTCGAGCTGCCGAACCGGGTTCCTTACGGGTTCCACG CCTTCTTTGTCAACGAGGAACAACTGGTACATCAGCAAGCAGAGGTGTGA |
Ta_5D:2137905-2137919:+ does not have available information here.