Microexon ID Ta_5B:3921207-3921221:-
Species Triticum   Aestivum
Coordinates 5B:3921207..3921221
Microexon Cluster ID MEP45
Size 15
Phase 2
Pfam Domain Motif RPE65
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 47,15,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTTTGATGGAGATGG
Microexon Amino Acid seq WFDGDG
Microexon-tag DNA Seq AGGGTGGGGCCTAATCCGAAGTTCGTCCCTGTTGCAGGATATCATTGGTTTGATGGAGATGGAATGATCCATGCAATGCGTATTAAAGATGGCAGAGCTACGTACGTA
Microexon-tag Amino Acid Seq RVGPNPKFVPVAGYHWFDGDGMIHAMRIKDGRATYV
Microexon-tag spanning region3920862-3921575
Microexon-tag prediction score0.962
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5B02G002600.1x
Reference Transcript ID TraesCS5B02G002600.1
Gene ID TraesCS5B02G002600
Gene Name NA
Transcript ID TraesCS5B02G002600.1
Protein ID
Gene ID TraesCS5B02G002600
Gene Name
Pfam domain motif RPE65
Motif E-value 1.20E-130
Motif start 58
Motif end 518
Protein seq >TraesCS5B02G002600.1
MGEAVAAAEDTLKRGAVVVPAPQPSKGVASWAVDLLERLAVRLGHDKAKPLHWLSGNFAPVRDETPPAAGLPVRGHLPEC
LNGEFVRVGPNPKFVPVAGYHWFDGDGMIHAMRIKDGRATYVSRYVKTSRLKQEEYFGGAKFMKIGDLKGFFGLFMVQMQ
ALRKKLKILDVTYGFGTDKPYVVKVLEDGDLQTLGLLDYDKRLKHSFTAHPKVDPFTDEMFTFGYSHEPPYCTYRVITKD
GVMLDPVPITIPESVMMHDFAITENYSIFMDLPLLFRPKEMVKNGEFIYKFDPTKKARFGILQRYEKDEKTIRWFELPNC
FIFHNANAWEEGDEVVLITCRLENPDLDKVNGTQNDKLENFGNELYEMRFNMKTGAASQKQLSVSAVDFPRINESYTGRK
QQYVYCTILDSIAKVTGIIKFDLHAEPESGKKQLEVGGNVMGIYDLGPGRFGSEAVFVPKEPGVSGQEDDGYLILFVHDE
NTGKSEVNVIDAKTMSPDPVAVVELPNRVPYGFHAFFVNEEQLVHQQAEV*
CDS seq >TraesCS5B02G002600.1
ATGGGAGAAGCGGTGGCGGCGGCGGAGGACACCCTGAAGAGGGGGGCGGTGGTGGTGCCGGCGCCGCAGCCGAGCAAGGG
GGTGGCGTCCTGGGCGGTGGACCTGCTGGAGCGCCTCGCCGTCCGCCTCGGCCACGACAAGGCCAAGCCGCTCCACTGGC
TCTCCGGCAACTTCGCCCCCGTCCGCGACGAGACCCCGCCCGCCGCCGGCCTCCCCGTCCGCGGCCACCTCCCGGAGTGC
TTGAATGGTGAATTTGTCAGGGTGGGGCCTAATCCGAAGTTCGTCCCTGTTGCAGGATATCATTGGTTTGATGGAGATGG
AATGATCCATGCAATGCGTATTAAAGATGGCAGAGCTACGTACGTATCAAGATACGTGAAGACTTCTCGCCTCAAGCAAG
AAGAGTATTTTGGTGGAGCAAAGTTTATGAAGATTGGAGACCTAAAGGGCTTTTTTGGATTGTTTATGGTTCAAATGCAA
GCACTTAGGAAAAAACTGAAAATCCTGGATGTTACTTATGGATTTGGGACAGATAAACCCTACGTTGTTAAGGTCCTTGA
AGATGGAGACTTGCAAACTCTTGGGTTGTTGGATTATGACAAGAGGTTGAAACATTCTTTCACTGCTCATCCCAAGGTTG
ATCCATTTACAGATGAAATGTTCACGTTTGGGTACTCGCATGAACCTCCTTATTGCACATACCGGGTCATCACCAAGGAC
GGAGTTATGCTTGATCCTGTGCCAATAACAATACCAGAGTCTGTAATGATGCACGACTTTGCAATCACAGAGAACTATTC
CATATTTATGGACCTGCCTTTGTTGTTTCGACCAAAGGAAATGGTTAAGAATGGTGAATTCATCTACAAGTTTGACCCTA
CCAAGAAAGCTCGTTTCGGCATACTCCAGCGTTATGAAAAGGATGAAAAAACCATCAGATGGTTTGAACTCCCCAATTGC
TTCATATTCCACAACGCTAATGCCTGGGAAGAGGGCGACGAAGTTGTTCTGATTACCTGCCGCCTTGAGAACCCAGATCT
GGACAAGGTGAACGGCACCCAAAACGACAAGCTCGAGAACTTCGGGAATGAGCTGTATGAGATGAGATTCAACATGAAAA
CAGGTGCTGCTTCGCAGAAGCAACTGTCCGTCTCTGCTGTAGACTTTCCTCGAATCAACGAGAGCTATACTGGCAGAAAG
CAGCAGTATGTGTACTGCACGATACTCGACAGCATAGCGAAGGTGACCGGCATCATCAAATTTGACCTGCACGCCGAGCC
AGAGAGCGGCAAGAAGCAGCTTGAAGTCGGTGGGAATGTGATGGGCATATACGACCTGGGACCTGGTAGGTTCGGCTCGG
AGGCGGTCTTCGTGCCCAAGGAGCCCGGTGTTTCTGGTCAAGAAGATGACGGCTATCTGATACTCTTTGTGCATGATGAG
AACACAGGGAAATCTGAGGTGAATGTGATTGATGCCAAGACCATGTCGCCTGATCCGGTGGCGGTCGTCGAGCTGCCGAA
CCGGGTTCCCTACGGGTTCCACGCCTTCTTTGTCAACGAGGAACAACTGGTACATCAGCAAGCAGAGGTGTGA
Ta_5B:3921207-3921221:- does not have available information here.