
Microexon ID | Ta_5B:3921207-3921221:- |
Species | Triticum Aestivum | Coordinates | 5B:3921207..3921221 |
Microexon Cluster ID | MEP45 |
Size | 15 |
Phase | 2 |
Pfam Domain Motif | RPE65 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTGATGGAGATGG |
Microexon Amino Acid seq | WFDGDG |
Microexon-tag DNA Seq | AGGGTGGGGCCTAATCCGAAGTTCGTCCCTGTTGCAGGATATCATTGGTTTGATGGAGATGGAATGATCCATGCAATGCGTATTAAAGATGGCAGAGCTACGTACGTA |
Microexon-tag Amino Acid Seq | RVGPNPKFVPVAGYHWFDGDGMIHAMRIKDGRATYV |
Microexon-tag spanning region | 3920862-3921575 |
Microexon-tag prediction score | 0.962 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5B02G002600.1x |
Reference Transcript ID | TraesCS5B02G002600.1 |
Gene ID | TraesCS5B02G002600 |
Gene Name | NA |
Transcript ID | TraesCS5B02G002600.1 |
Protein ID | |
Gene ID | TraesCS5B02G002600 |
Gene Name | |
Pfam domain motif | RPE65 |
Motif E-value | 1.20E-130 |
Motif start | 58 |
Motif end | 518 |
Protein seq | >TraesCS5B02G002600.1 MGEAVAAAEDTLKRGAVVVPAPQPSKGVASWAVDLLERLAVRLGHDKAKPLHWLSGNFAPVRDETPPAAGLPVRGHLPEC LNGEFVRVGPNPKFVPVAGYHWFDGDGMIHAMRIKDGRATYVSRYVKTSRLKQEEYFGGAKFMKIGDLKGFFGLFMVQMQ ALRKKLKILDVTYGFGTDKPYVVKVLEDGDLQTLGLLDYDKRLKHSFTAHPKVDPFTDEMFTFGYSHEPPYCTYRVITKD GVMLDPVPITIPESVMMHDFAITENYSIFMDLPLLFRPKEMVKNGEFIYKFDPTKKARFGILQRYEKDEKTIRWFELPNC FIFHNANAWEEGDEVVLITCRLENPDLDKVNGTQNDKLENFGNELYEMRFNMKTGAASQKQLSVSAVDFPRINESYTGRK QQYVYCTILDSIAKVTGIIKFDLHAEPESGKKQLEVGGNVMGIYDLGPGRFGSEAVFVPKEPGVSGQEDDGYLILFVHDE NTGKSEVNVIDAKTMSPDPVAVVELPNRVPYGFHAFFVNEEQLVHQQAEV* |
CDS seq | >TraesCS5B02G002600.1 ATGGGAGAAGCGGTGGCGGCGGCGGAGGACACCCTGAAGAGGGGGGCGGTGGTGGTGCCGGCGCCGCAGCCGAGCAAGGG GGTGGCGTCCTGGGCGGTGGACCTGCTGGAGCGCCTCGCCGTCCGCCTCGGCCACGACAAGGCCAAGCCGCTCCACTGGC TCTCCGGCAACTTCGCCCCCGTCCGCGACGAGACCCCGCCCGCCGCCGGCCTCCCCGTCCGCGGCCACCTCCCGGAGTGC TTGAATGGTGAATTTGTCAGGGTGGGGCCTAATCCGAAGTTCGTCCCTGTTGCAGGATATCATTGGTTTGATGGAGATGG AATGATCCATGCAATGCGTATTAAAGATGGCAGAGCTACGTACGTATCAAGATACGTGAAGACTTCTCGCCTCAAGCAAG AAGAGTATTTTGGTGGAGCAAAGTTTATGAAGATTGGAGACCTAAAGGGCTTTTTTGGATTGTTTATGGTTCAAATGCAA GCACTTAGGAAAAAACTGAAAATCCTGGATGTTACTTATGGATTTGGGACAGATAAACCCTACGTTGTTAAGGTCCTTGA AGATGGAGACTTGCAAACTCTTGGGTTGTTGGATTATGACAAGAGGTTGAAACATTCTTTCACTGCTCATCCCAAGGTTG ATCCATTTACAGATGAAATGTTCACGTTTGGGTACTCGCATGAACCTCCTTATTGCACATACCGGGTCATCACCAAGGAC GGAGTTATGCTTGATCCTGTGCCAATAACAATACCAGAGTCTGTAATGATGCACGACTTTGCAATCACAGAGAACTATTC CATATTTATGGACCTGCCTTTGTTGTTTCGACCAAAGGAAATGGTTAAGAATGGTGAATTCATCTACAAGTTTGACCCTA CCAAGAAAGCTCGTTTCGGCATACTCCAGCGTTATGAAAAGGATGAAAAAACCATCAGATGGTTTGAACTCCCCAATTGC TTCATATTCCACAACGCTAATGCCTGGGAAGAGGGCGACGAAGTTGTTCTGATTACCTGCCGCCTTGAGAACCCAGATCT GGACAAGGTGAACGGCACCCAAAACGACAAGCTCGAGAACTTCGGGAATGAGCTGTATGAGATGAGATTCAACATGAAAA CAGGTGCTGCTTCGCAGAAGCAACTGTCCGTCTCTGCTGTAGACTTTCCTCGAATCAACGAGAGCTATACTGGCAGAAAG CAGCAGTATGTGTACTGCACGATACTCGACAGCATAGCGAAGGTGACCGGCATCATCAAATTTGACCTGCACGCCGAGCC AGAGAGCGGCAAGAAGCAGCTTGAAGTCGGTGGGAATGTGATGGGCATATACGACCTGGGACCTGGTAGGTTCGGCTCGG AGGCGGTCTTCGTGCCCAAGGAGCCCGGTGTTTCTGGTCAAGAAGATGACGGCTATCTGATACTCTTTGTGCATGATGAG AACACAGGGAAATCTGAGGTGAATGTGATTGATGCCAAGACCATGTCGCCTGATCCGGTGGCGGTCGTCGAGCTGCCGAA CCGGGTTCCCTACGGGTTCCACGCCTTCTTTGTCAACGAGGAACAACTGGTACATCAGCAAGCAGAGGTGTGA |
Ta_5B:3921207-3921221:- does not have available information here.