
Microexon ID | Ta_5A:2085480-2085494:- |
Species | Triticum Aestivum | Coordinates | 5A:2085480..2085494 |
Microexon Cluster ID | MEP45 |
Size | 15 |
Phase | 2 |
Pfam Domain Motif | RPE65 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTGATGGGGATGG |
Microexon Amino Acid seq | WFDGDG |
Microexon-tag DNA Seq | AGGGTGGGGCCTAACCCCAAGTTTGCCCCTCTTGCAGGGTATCATTGGTTTGATGGGGATGGAATGATCCATGCAATGCGCATTAAAGATGGAAAAGCTACATATGTA |
Microexon-tag Amino Acid Seq | RVGPNPKFAPLAGYHWFDGDGMIHAMRIKDGKATYV |
Microexon-tag spanning region | 2085245-2085631 |
Microexon-tag prediction score | 0.9699 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5A02G002400.1x |
Reference Transcript ID | TraesCS5A02G002400.1 |
Gene ID | TraesCS5A02G002400 |
Gene Name | NA |
Transcript ID | TraesCS5A02G002400.1 |
Protein ID | |
Gene ID | TraesCS5A02G002400 |
Gene Name | |
Pfam domain motif | RPE65 |
Motif E-value | 4.50E-140 |
Motif start | 68 |
Motif end | 552 |
Protein seq | >TraesCS5A02G002400.1 MGEAQAAAAAATMGEDTQSKGAAMVVVPAPRPRKGVASWAVDLLERLAVRLRHDDKKAEPIPWLSGNFAPVPDETPPAAG LPVRGHLPKCLNGEFVRVGPNPKFAPLAGYHWFDGDGMIHAMRIKDGKATYVSRYVKTSRLEQEEYFGGAKFTKIGDLKG VFGLFMVLTQELRKKLKVLDATYGIGTANTALIYHHGKLMALSESDKPYVVKILEDGDLQTLGLLDYDKRLKHPFTAHPK VDPFTDEMFTFGYSHEPPYCTYRIITKDGIMLDPVPITIPESVMMHDFAITENYSIFMDLPMFFRPKEMAKNGEFIYKFD PTKNARFGILQRYEKDEKTIRWFELPNCFIFHNANAWEEGDEVILITCRLNNLDLDQVNGHQSDKLEDPGNELYEMRFNM KTGAASQKQLSVSAIDFPRINESYTGRKQRYIYCTILESTVKVTGILKMIGIIKFDLHAEPESDKEQLEVGGNVRGIYDL GPSRFCSEAVFVPKEPGVLGEEDDGYLIFFVHDENTGKSEINVIDAKTMCADPVAVVELPSRVPYGFHAFFVNEEQLGHQ VER* |
CDS seq | >TraesCS5A02G002400.1 ATGGGAGAAGCACAAGCAGCAGCAGCGGCGGCCACCATGGGAGAAGATACCCAGAGCAAGGGGGCGGCAATGGTGGTGGT GCCTGCGCCGCGGCCGCGCAAGGGGGTGGCGTCCTGGGCGGTCGACCTGCTCGAGCGGCTCGCCGTCCGCCTCCGTCACG ACGACAAGAAAGCCGAGCCCATCCCCTGGCTCTCCGGCAACTTCGCCCCCGTGCCGGACGAGACCCCGCCCGCCGCCGGC CTCCCCGTCCGCGGACACCTCCCGAAGTGCTTGAATGGAGAATTTGTCAGGGTGGGGCCTAACCCCAAGTTTGCCCCTCT TGCAGGGTATCATTGGTTTGATGGGGATGGAATGATCCATGCAATGCGCATTAAAGATGGAAAAGCTACATATGTATCAA GATATGTGAAGACTTCTCGCCTCGAGCAAGAAGAGTATTTTGGTGGAGCAAAGTTTACCAAGATTGGAGATCTAAAGGGT GTTTTTGGATTGTTTATGGTTCTAACACAAGAACTTAGGAAGAAACTTAAAGTCTTAGATGCTACTTACGGAATTGGAAC AGCTAATACTGCGCTTATATATCATCATGGCAAACTCATGGCCCTGTCAGAATCAGATAAACCTTATGTTGTTAAGATCC TTGAAGATGGAGACTTGCAAACTCTTGGTTTGTTGGATTATGACAAAAGGTTGAAACATCCTTTCACTGCTCATCCAAAG GTTGATCCATTCACAGATGAAATGTTCACCTTTGGGTATTCGCATGAACCTCCCTATTGTACATATCGGATCATCACCAA GGACGGAATTATGCTTGACCCTGTGCCAATAACAATACCGGAATCTGTAATGATGCATGACTTTGCCATTACAGAGAACT ATTCCATATTTATGGACTTGCCAATGTTTTTTCGACCAAAGGAAATGGCGAAGAATGGTGAATTTATCTACAAGTTTGAT CCTACAAAGAACGCTCGGTTTGGTATACTCCAACGCTATGAGAAGGACGAAAAGACCATCAGATGGTTTGAACTCCCCAA TTGCTTCATATTCCACAATGCTAACGCCTGGGAAGAGGGTGACGAAGTTATTCTCATTACATGTCGTCTCAACAACCTAG ATTTGGACCAAGTGAATGGTCACCAAAGTGACAAGCTTGAGGATCCCGGGAATGAGTTGTACGAGATGAGATTCAACATG AAAACAGGTGCTGCTTCGCAGAAACAACTATCAGTATCTGCCATAGACTTTCCTCGGATCAATGAGAGTTATACTGGCAG AAAGCAGCGGTACATCTACTGCACGATACTTGAGAGCACAGTGAAGGTGACTGGCATCTTAAAAATGATTGGCATCATAA AATTTGACCTACATGCGGAGCCAGAGAGCGACAAGGAGCAGCTTGAAGTTGGGGGGAATGTGAGGGGCATATATGACCTA GGGCCTAGTAGGTTTTGTTCGGAGGCGGTCTTCGTGCCCAAGGAGCCTGGTGTTTTAGGGGAAGAAGATGATGGGTACTT GATATTCTTTGTGCACGATGAAAACACAGGGAAATCTGAAATAAATGTGATTGATGCCAAGACGATGTGTGCTGATCCAG TGGCGGTTGTTGAGCTGCCGAGCCGGGTTCCTTACGGATTCCATGCCTTCTTTGTCAATGAGGAACAACTAGGACATCAA GTAGAGCGGTGA |
Ta_5A:2085480-2085494:- does not have available information here.