Microexon ID Ta_5A:2085480-2085494:-
Species Triticum   Aestivum
Coordinates 5A:2085480..2085494
Microexon Cluster ID MEP45
Size 15
Phase 2
Pfam Domain Motif RPE65
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 47,15,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTTTGATGGGGATGG
Microexon Amino Acid seq WFDGDG
Microexon-tag DNA Seq AGGGTGGGGCCTAACCCCAAGTTTGCCCCTCTTGCAGGGTATCATTGGTTTGATGGGGATGGAATGATCCATGCAATGCGCATTAAAGATGGAAAAGCTACATATGTA
Microexon-tag Amino Acid Seq RVGPNPKFAPLAGYHWFDGDGMIHAMRIKDGKATYV
Microexon-tag spanning region2085245-2085631
Microexon-tag prediction score0.9699
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5A02G002400.1x
Reference Transcript ID TraesCS5A02G002400.1
Gene ID TraesCS5A02G002400
Gene Name NA
Transcript ID TraesCS5A02G002400.1
Protein ID
Gene ID TraesCS5A02G002400
Gene Name
Pfam domain motif RPE65
Motif E-value 4.50E-140
Motif start 68
Motif end 552
Protein seq >TraesCS5A02G002400.1
MGEAQAAAAAATMGEDTQSKGAAMVVVPAPRPRKGVASWAVDLLERLAVRLRHDDKKAEPIPWLSGNFAPVPDETPPAAG
LPVRGHLPKCLNGEFVRVGPNPKFAPLAGYHWFDGDGMIHAMRIKDGKATYVSRYVKTSRLEQEEYFGGAKFTKIGDLKG
VFGLFMVLTQELRKKLKVLDATYGIGTANTALIYHHGKLMALSESDKPYVVKILEDGDLQTLGLLDYDKRLKHPFTAHPK
VDPFTDEMFTFGYSHEPPYCTYRIITKDGIMLDPVPITIPESVMMHDFAITENYSIFMDLPMFFRPKEMAKNGEFIYKFD
PTKNARFGILQRYEKDEKTIRWFELPNCFIFHNANAWEEGDEVILITCRLNNLDLDQVNGHQSDKLEDPGNELYEMRFNM
KTGAASQKQLSVSAIDFPRINESYTGRKQRYIYCTILESTVKVTGILKMIGIIKFDLHAEPESDKEQLEVGGNVRGIYDL
GPSRFCSEAVFVPKEPGVLGEEDDGYLIFFVHDENTGKSEINVIDAKTMCADPVAVVELPSRVPYGFHAFFVNEEQLGHQ
VER*
CDS seq >TraesCS5A02G002400.1
ATGGGAGAAGCACAAGCAGCAGCAGCGGCGGCCACCATGGGAGAAGATACCCAGAGCAAGGGGGCGGCAATGGTGGTGGT
GCCTGCGCCGCGGCCGCGCAAGGGGGTGGCGTCCTGGGCGGTCGACCTGCTCGAGCGGCTCGCCGTCCGCCTCCGTCACG
ACGACAAGAAAGCCGAGCCCATCCCCTGGCTCTCCGGCAACTTCGCCCCCGTGCCGGACGAGACCCCGCCCGCCGCCGGC
CTCCCCGTCCGCGGACACCTCCCGAAGTGCTTGAATGGAGAATTTGTCAGGGTGGGGCCTAACCCCAAGTTTGCCCCTCT
TGCAGGGTATCATTGGTTTGATGGGGATGGAATGATCCATGCAATGCGCATTAAAGATGGAAAAGCTACATATGTATCAA
GATATGTGAAGACTTCTCGCCTCGAGCAAGAAGAGTATTTTGGTGGAGCAAAGTTTACCAAGATTGGAGATCTAAAGGGT
GTTTTTGGATTGTTTATGGTTCTAACACAAGAACTTAGGAAGAAACTTAAAGTCTTAGATGCTACTTACGGAATTGGAAC
AGCTAATACTGCGCTTATATATCATCATGGCAAACTCATGGCCCTGTCAGAATCAGATAAACCTTATGTTGTTAAGATCC
TTGAAGATGGAGACTTGCAAACTCTTGGTTTGTTGGATTATGACAAAAGGTTGAAACATCCTTTCACTGCTCATCCAAAG
GTTGATCCATTCACAGATGAAATGTTCACCTTTGGGTATTCGCATGAACCTCCCTATTGTACATATCGGATCATCACCAA
GGACGGAATTATGCTTGACCCTGTGCCAATAACAATACCGGAATCTGTAATGATGCATGACTTTGCCATTACAGAGAACT
ATTCCATATTTATGGACTTGCCAATGTTTTTTCGACCAAAGGAAATGGCGAAGAATGGTGAATTTATCTACAAGTTTGAT
CCTACAAAGAACGCTCGGTTTGGTATACTCCAACGCTATGAGAAGGACGAAAAGACCATCAGATGGTTTGAACTCCCCAA
TTGCTTCATATTCCACAATGCTAACGCCTGGGAAGAGGGTGACGAAGTTATTCTCATTACATGTCGTCTCAACAACCTAG
ATTTGGACCAAGTGAATGGTCACCAAAGTGACAAGCTTGAGGATCCCGGGAATGAGTTGTACGAGATGAGATTCAACATG
AAAACAGGTGCTGCTTCGCAGAAACAACTATCAGTATCTGCCATAGACTTTCCTCGGATCAATGAGAGTTATACTGGCAG
AAAGCAGCGGTACATCTACTGCACGATACTTGAGAGCACAGTGAAGGTGACTGGCATCTTAAAAATGATTGGCATCATAA
AATTTGACCTACATGCGGAGCCAGAGAGCGACAAGGAGCAGCTTGAAGTTGGGGGGAATGTGAGGGGCATATATGACCTA
GGGCCTAGTAGGTTTTGTTCGGAGGCGGTCTTCGTGCCCAAGGAGCCTGGTGTTTTAGGGGAAGAAGATGATGGGTACTT
GATATTCTTTGTGCACGATGAAAACACAGGGAAATCTGAAATAAATGTGATTGATGCCAAGACGATGTGTGCTGATCCAG
TGGCGGTTGTTGAGCTGCCGAGCCGGGTTCCTTACGGATTCCATGCCTTCTTTGTCAATGAGGAACAACTAGGACATCAA
GTAGAGCGGTGA
Ta_5A:2085480-2085494:- does not have available information here.