Microexon ID Sm_GL377662:428847-428861:-
Species Selaginella moellendorffii
Coordinates GL377662:428847..428861
Microexon Cluster ID MEP45
Size 15
Phase 2
Pfam Domain Motif RPE65
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 47,15,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Sm_GL377662:428847-428861:- does not have available information here.
Transcript ID EFJ09546
Protein ID EFJ09546
Gene ID SELMODRAFT_272067
Gene Name NA
Pfam domain motif RPE65
Motif E-value 2.3e-128
Motif start 68
Motif end 540
Protein seq >EFJ09546
MGTERLRKESQDKFLGSLPLGVRIVQPRTPGIGARIAAKLCDGIEALLVQLFSGASSKSNLFLQENFAPVGESGPFADLP
VTGALPECLNGEFVRTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYVSRYVKTSKLKQEEFYGTPTFLKVGDLKGIL
GIFLANVFRLRVALGVVDAEYGMGTANTAMVYHNKKLLALLEADKPYAIRMLEDGNLETIGVLDYDKRLSHAVTAHPKVD
PVTGEMFFFCYQQQTPYVIYRVISKDGTLHDPVSINIPDPVMMHDFAITENYAIFMDLPMTFKPKNMGEGKMIISFDSTK
RSRFGVLPRYALSDSQMRWFHLPSCYIFHTANAWEDGDEVVLVACRMPKFDMELMKDTDDHVLELYEFRFNMKSGAALQR
PLSKGPAVEFPRINENYIGRKQRYVYAAVFHDQVRIKGVAKFDLHKDPELSKDGGNPVGSNVVGEFMYGGRRFGSEAVFV
PKSSDKDADEDDGYLISFVYDEGAGKSEAVVIDAKTMAADPVAVVSIPVRIPYGFHSIFVNEDQLGNQA*
CDS seq >EFJ09546
ATGGGAACCGAGAGGCTGCGCAAGGAGAGCCAAGATAAGTTCCTGGGCAGCTTGCCCCTGGGCGTCCGGATCGTCCAGCC
AAGAACGCCGGGCATAGGAGCCAGGATTGCTGCCAAGCTTTGCGATGGGATCGAGGCTTTGCTCGTCCAGTTGTTTAGCG
GCGCTTCCAGCAAATCCAACCTGTTTCTTCAAGAGAACTTCGCGCCGGTTGGAGAGTCTGGGCCATTTGCGGACTTGCCA
GTAACTGGCGCTCTCCCGGAATGCTTGAATGGAGAATTTGTGCGCACTGGACCAAATCCGAGATTCGAGCCTACTGCAGG
CTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTCTCTCGCTACG
TGAAGACCTCCAAGTTAAAACAAGAGGAATTCTATGGAACTCCAACTTTCCTGAAGGTGGGAGATTTGAAAGGAATACTT
GGGATTTTCTTAGCGAATGTTTTTCGGCTGCGAGTTGCTCTCGGTGTCGTGGACGCAGAATATGGCATGGGAACTGCCAA
TACAGCCATGGTGTATCACAACAAGAAACTTTTAGCACTATTAGAGGCTGACAAACCATATGCTATTCGAATGCTCGAAG
ATGGGAACCTTGAGACAATTGGCGTGCTTGACTATGACAAAAGATTGTCTCACGCTGTTACTGCTCATCCCAAAGTTGAC
CCTGTGACAGGCGAGATGTTTTTCTTCTGTTACCAACAGCAAACACCATACGTAATCTATCGCGTCATTTCGAAAGATGG
AACTTTGCATGATCCGGTAAGCATCAACATCCCCGACCCCGTGATGATGCACGACTTCGCAATCACGGAGAACTACGCAA
TTTTCATGGATCTTCCAATGACTTTTAAACCAAAGAACATGGGTGAGGGAAAAATGATAATCTCGTTTGACAGCACGAAG
AGGTCCCGCTTTGGAGTGCTGCCTCGTTATGCTCTCAGCGACAGCCAGATGCGCTGGTTTCATCTTCCAAGTTGTTATAT
TTTCCACACAGCAAATGCGTGGGAAGACGGGGACGAGGTAGTTCTCGTTGCTTGCCGCATGCCAAAGTTCGACATGGAGC
TCATGAAAGACACTGACGATCATGTTCTCGAGCTCTACGAATTTCGGTTCAACATGAAGAGCGGTGCTGCTTTGCAGCGT
CCACTCTCAAAGGGGCCAGCGGTGGAGTTTCCTCGCATCAACGAAAACTACATAGGAAGGAAGCAACGTTACGTGTATGC
TGCCGTTTTCCACGATCAAGTGAGGATCAAAGGAGTGGCGAAGTTTGATCTCCACAAGGATCCCGAGCTCTCCAAGGATG
GTGGTAATCCCGTTGGGAGCAATGTGGTCGGGGAGTTCATGTATGGAGGTCGCCGGTTTGGCTCCGAGGCGGTGTTTGTT
CCAAAGAGCTCGGACAAGGACGCGGATGAAGACGATGGCTACCTCATCTCTTTTGTTTACGACGAAGGGGCGGGAAAATC
GGAGGCAGTCGTGATTGATGCCAAGACAATGGCAGCCGATCCAGTTGCTGTGGTCTCGATCCCTGTAAGGATTCCTTATG
GTTTCCACTCGATTTTTGTGAATGAGGATCAGCTAGGGAACCAAGCATGA
Microexon DNA seq GTTCGACGGAGATGG
Microexon Amino Acid seq WFDGDG
Microexon-tag DNA Seq CGCACTGGACCAAATCCGAGATTCGAGCCTACTGCAGGCTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTC
Microexon-tag Amino Acid seq RTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYV
Transcript ID Sm.27817.2
Gene ID Sm.27817
Gene Name NA
Pfam domain motif RPE65
Motif E-value 2.1e-127
Motif start 68
Motif end 540
Protein seq >Sm.27817.2
MGTERLRKESQDKFLGSLPLGVRIVQPRTPGIGARIAAKLCDGIEALLVQLFSGASSKSNLFLQENFAPVGESGPFADLP
VTGALPECLNGEFVRTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYVSRYVKTSKLKQEEFYGTPTFLKVGDLKGIL
GIFLANVFRLRVALGVVDAEYGMGTANTAMVYHNKKLLALLEADKPYAIRMLEDGNLETIGVLDYDKRLSHAVTAHPKVD
PVTGEMFFFCYQQQTPYVIYRVISKDGTLHDPVSINIPDPVMMHDFAITENYAIFMDLPMTFKPKNMGEGKMIISFDSTK
RSRFGVLPRYALSDSQMRWFHLPSCYIFHTANAWEDGDEVVLVACRMPKFDMELMKDTDDHVLELYEFRFNMKSGAALQR
PLSKGPAVEFPRINENYIGRKQRYVYAAVFHDQVRIKGVAKFDLHKDPELSKDGGNPVGSNVVGEFMYGSRRFGSEVVFV
PKSSDKDADEDDGYLISFVYDERAGKSEAVVIDAKTMAADPVAVVSIPVRIPYGFHLIFVNEVRLSFLIGLFLFYFPSLG
PAREPSMIIDHEKIRVDSGRCVQELLYML*
CDS seq >Sm.27817.2
ATGGGAACCGAGAGGCTGCGCAAGGAGAGCCAAGATAAGTTCCTGGGCAGCTTGCCCCTGGGCGTCCGGATCGTCCAGCC
AAGAACGCCGGGCATAGGAGCCAGGATTGCTGCCAAGCTTTGCGATGGGATCGAGGCTTTGCTCGTCCAGTTGTTTAGCG
GCGCTTCCAGCAAATCCAACCTGTTTCTTCAAGAGAACTTCGCGCCGGTTGGAGAGTCTGGGCCATTTGCGGACTTGCCA
GTAACTGGCGCTCTCCCGGAATGCTTGAATGGAGAATTTGTGCGCACTGGACCAAATCCGAGATTCGAGCCTACTGCAGG
CTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTCTCTCGCTACG
TGAAGACCTCCAAGTTAAAACAAGAGGAATTCTATGGAACTCCAACTTTCCTGAAGGTGGGAGATTTGAAAGGAATACTT
GGGATTTTCTTAGCGAATGTTTTTCGGCTGCGAGTTGCTCTCGGTGTCGTGGACGCAGAATATGGCATGGGAACTGCCAA
TACAGCCATGGTGTATCACAACAAGAAACTTTTAGCACTATTAGAGGCTGACAAACCATATGCTATTCGAATGCTCGAAG
ATGGGAACCTTGAGACAATTGGCGTGCTTGACTATGACAAAAGATTGTCTCACGCTGTTACTGCTCATCCCAAAGTTGAC
CCTGTGACAGGCGAGATGTTTTTCTTCTGTTACCAACAGCAAACACCATACGTAATCTATCGCGTCATTTCGAAAGATGG
AACTTTGCATGATCCGGTAAGCATCAACATCCCCGACCCCGTGATGATGCACGACTTCGCAATCACGGAGAACTACGCAA
TTTTCATGGATCTTCCAATGACTTTTAAACCAAAGAACATGGGTGAGGGAAAAATGATAATCTCGTTTGACAGCACGAAG
AGGTCCCGCTTTGGAGTGCTGCCTCGTTATGCTCTCAGCGACAGCCAGATGCGCTGGTTTCATCTTCCAAGTTGTTATAT
TTTCCACACAGCAAATGCGTGGGAAGACGGGGACGAGGTAGTTCTCGTTGCTTGCCGCATGCCAAAGTTCGACATGGAGC
TCATGAAAGACACTGACGATCATGTTCTCGAGCTCTACGAATTTCGGTTCAACATGAAGAGCGGTGCTGCTTTGCAGCGT
CCACTCTCAAAGGGGCCAGCGGTGGAGTTTCCTCGCATCAACGAAAACTACATAGGAAGGAAGCAACGTTACGTGTATGC
TGCCGTTTTCCACGATCAAGTGAGGATCAAAGGAGTGGCGAAGTTTGATCTCCACAAGGATCCCGAGCTCTCCAAGGATG
GTGGTAATCCCGTTGGGAGCAATGTGGTCGGGGAGTTCATGTATGGAAGTCGCCGGTTTGGCTCCGAGGTGGTGTTTGTT
CCAAAGAGCTCCGACAAGGACGCGGATGAAGACGATGGCTACCTCATCTCTTTTGTTTACGACGAACGGGCGGGCAAATC
GGAGGCCGTCGTGATTGATGCGAAGACAATGGCAGCCGATCCAGTTGCTGTGGTCTCGATCCCTGTCAGGATTCCTTATG
GTTTCCACTTGATATTTGTCAATGAGGTGAGATTGAGTTTCCTCATTGGTTTATTCCTTTTCTATTTCCCGAGTTTAGGA
CCAGCTAGAGAACCAAGCATGATAATTGATCACGAAAAAATACGTGTAGATTCTGGACGATGTGTTCAAGAATTATTATA
TATGTTGTAA