
Microexon ID | Sm_GL377662:428847-428861:- |
Species | Selaginella moellendorffii | Coordinates | GL377662:428847..428861 |
Microexon Cluster ID | MEP45 |
Size | 15 |
Phase | 2 |
Pfam Domain Motif | RPE65 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Sm_GL377662:428847-428861:- does not have available information here.
Transcript ID | EFJ09546 |
Protein ID | EFJ09546 |
Gene ID | SELMODRAFT_272067 |
Gene Name | NA |
Pfam domain motif | RPE65 |
Motif E-value | 2.3e-128 |
Motif start | 68 |
Motif end | 540 |
Protein seq | >EFJ09546 MGTERLRKESQDKFLGSLPLGVRIVQPRTPGIGARIAAKLCDGIEALLVQLFSGASSKSNLFLQENFAPVGESGPFADLP VTGALPECLNGEFVRTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYVSRYVKTSKLKQEEFYGTPTFLKVGDLKGIL GIFLANVFRLRVALGVVDAEYGMGTANTAMVYHNKKLLALLEADKPYAIRMLEDGNLETIGVLDYDKRLSHAVTAHPKVD PVTGEMFFFCYQQQTPYVIYRVISKDGTLHDPVSINIPDPVMMHDFAITENYAIFMDLPMTFKPKNMGEGKMIISFDSTK RSRFGVLPRYALSDSQMRWFHLPSCYIFHTANAWEDGDEVVLVACRMPKFDMELMKDTDDHVLELYEFRFNMKSGAALQR PLSKGPAVEFPRINENYIGRKQRYVYAAVFHDQVRIKGVAKFDLHKDPELSKDGGNPVGSNVVGEFMYGGRRFGSEAVFV PKSSDKDADEDDGYLISFVYDEGAGKSEAVVIDAKTMAADPVAVVSIPVRIPYGFHSIFVNEDQLGNQA* |
CDS seq | >EFJ09546 ATGGGAACCGAGAGGCTGCGCAAGGAGAGCCAAGATAAGTTCCTGGGCAGCTTGCCCCTGGGCGTCCGGATCGTCCAGCC AAGAACGCCGGGCATAGGAGCCAGGATTGCTGCCAAGCTTTGCGATGGGATCGAGGCTTTGCTCGTCCAGTTGTTTAGCG GCGCTTCCAGCAAATCCAACCTGTTTCTTCAAGAGAACTTCGCGCCGGTTGGAGAGTCTGGGCCATTTGCGGACTTGCCA GTAACTGGCGCTCTCCCGGAATGCTTGAATGGAGAATTTGTGCGCACTGGACCAAATCCGAGATTCGAGCCTACTGCAGG CTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTCTCTCGCTACG TGAAGACCTCCAAGTTAAAACAAGAGGAATTCTATGGAACTCCAACTTTCCTGAAGGTGGGAGATTTGAAAGGAATACTT GGGATTTTCTTAGCGAATGTTTTTCGGCTGCGAGTTGCTCTCGGTGTCGTGGACGCAGAATATGGCATGGGAACTGCCAA TACAGCCATGGTGTATCACAACAAGAAACTTTTAGCACTATTAGAGGCTGACAAACCATATGCTATTCGAATGCTCGAAG ATGGGAACCTTGAGACAATTGGCGTGCTTGACTATGACAAAAGATTGTCTCACGCTGTTACTGCTCATCCCAAAGTTGAC CCTGTGACAGGCGAGATGTTTTTCTTCTGTTACCAACAGCAAACACCATACGTAATCTATCGCGTCATTTCGAAAGATGG AACTTTGCATGATCCGGTAAGCATCAACATCCCCGACCCCGTGATGATGCACGACTTCGCAATCACGGAGAACTACGCAA TTTTCATGGATCTTCCAATGACTTTTAAACCAAAGAACATGGGTGAGGGAAAAATGATAATCTCGTTTGACAGCACGAAG AGGTCCCGCTTTGGAGTGCTGCCTCGTTATGCTCTCAGCGACAGCCAGATGCGCTGGTTTCATCTTCCAAGTTGTTATAT TTTCCACACAGCAAATGCGTGGGAAGACGGGGACGAGGTAGTTCTCGTTGCTTGCCGCATGCCAAAGTTCGACATGGAGC TCATGAAAGACACTGACGATCATGTTCTCGAGCTCTACGAATTTCGGTTCAACATGAAGAGCGGTGCTGCTTTGCAGCGT CCACTCTCAAAGGGGCCAGCGGTGGAGTTTCCTCGCATCAACGAAAACTACATAGGAAGGAAGCAACGTTACGTGTATGC TGCCGTTTTCCACGATCAAGTGAGGATCAAAGGAGTGGCGAAGTTTGATCTCCACAAGGATCCCGAGCTCTCCAAGGATG GTGGTAATCCCGTTGGGAGCAATGTGGTCGGGGAGTTCATGTATGGAGGTCGCCGGTTTGGCTCCGAGGCGGTGTTTGTT CCAAAGAGCTCGGACAAGGACGCGGATGAAGACGATGGCTACCTCATCTCTTTTGTTTACGACGAAGGGGCGGGAAAATC GGAGGCAGTCGTGATTGATGCCAAGACAATGGCAGCCGATCCAGTTGCTGTGGTCTCGATCCCTGTAAGGATTCCTTATG GTTTCCACTCGATTTTTGTGAATGAGGATCAGCTAGGGAACCAAGCATGA |
Microexon DNA seq | GTTCGACGGAGATGG |
Microexon Amino Acid seq | WFDGDG |
Microexon-tag DNA Seq | CGCACTGGACCAAATCCGAGATTCGAGCCTACTGCAGGCTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTC |
Microexon-tag Amino Acid seq | RTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYV |
Transcript ID | Sm.27817.2 |
Gene ID | Sm.27817 |
Gene Name | NA |
Pfam domain motif | RPE65 |
Motif E-value | 2.1e-127 |
Motif start | 68 |
Motif end | 540 |
Protein seq | >Sm.27817.2 MGTERLRKESQDKFLGSLPLGVRIVQPRTPGIGARIAAKLCDGIEALLVQLFSGASSKSNLFLQENFAPVGESGPFADLP VTGALPECLNGEFVRTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYVSRYVKTSKLKQEEFYGTPTFLKVGDLKGIL GIFLANVFRLRVALGVVDAEYGMGTANTAMVYHNKKLLALLEADKPYAIRMLEDGNLETIGVLDYDKRLSHAVTAHPKVD PVTGEMFFFCYQQQTPYVIYRVISKDGTLHDPVSINIPDPVMMHDFAITENYAIFMDLPMTFKPKNMGEGKMIISFDSTK RSRFGVLPRYALSDSQMRWFHLPSCYIFHTANAWEDGDEVVLVACRMPKFDMELMKDTDDHVLELYEFRFNMKSGAALQR PLSKGPAVEFPRINENYIGRKQRYVYAAVFHDQVRIKGVAKFDLHKDPELSKDGGNPVGSNVVGEFMYGSRRFGSEVVFV PKSSDKDADEDDGYLISFVYDERAGKSEAVVIDAKTMAADPVAVVSIPVRIPYGFHLIFVNEVRLSFLIGLFLFYFPSLG PAREPSMIIDHEKIRVDSGRCVQELLYML* |
CDS seq | >Sm.27817.2 ATGGGAACCGAGAGGCTGCGCAAGGAGAGCCAAGATAAGTTCCTGGGCAGCTTGCCCCTGGGCGTCCGGATCGTCCAGCC AAGAACGCCGGGCATAGGAGCCAGGATTGCTGCCAAGCTTTGCGATGGGATCGAGGCTTTGCTCGTCCAGTTGTTTAGCG GCGCTTCCAGCAAATCCAACCTGTTTCTTCAAGAGAACTTCGCGCCGGTTGGAGAGTCTGGGCCATTTGCGGACTTGCCA GTAACTGGCGCTCTCCCGGAATGCTTGAATGGAGAATTTGTGCGCACTGGACCAAATCCGAGATTCGAGCCTACTGCAGG CTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTCTCTCGCTACG TGAAGACCTCCAAGTTAAAACAAGAGGAATTCTATGGAACTCCAACTTTCCTGAAGGTGGGAGATTTGAAAGGAATACTT GGGATTTTCTTAGCGAATGTTTTTCGGCTGCGAGTTGCTCTCGGTGTCGTGGACGCAGAATATGGCATGGGAACTGCCAA TACAGCCATGGTGTATCACAACAAGAAACTTTTAGCACTATTAGAGGCTGACAAACCATATGCTATTCGAATGCTCGAAG ATGGGAACCTTGAGACAATTGGCGTGCTTGACTATGACAAAAGATTGTCTCACGCTGTTACTGCTCATCCCAAAGTTGAC CCTGTGACAGGCGAGATGTTTTTCTTCTGTTACCAACAGCAAACACCATACGTAATCTATCGCGTCATTTCGAAAGATGG AACTTTGCATGATCCGGTAAGCATCAACATCCCCGACCCCGTGATGATGCACGACTTCGCAATCACGGAGAACTACGCAA TTTTCATGGATCTTCCAATGACTTTTAAACCAAAGAACATGGGTGAGGGAAAAATGATAATCTCGTTTGACAGCACGAAG AGGTCCCGCTTTGGAGTGCTGCCTCGTTATGCTCTCAGCGACAGCCAGATGCGCTGGTTTCATCTTCCAAGTTGTTATAT TTTCCACACAGCAAATGCGTGGGAAGACGGGGACGAGGTAGTTCTCGTTGCTTGCCGCATGCCAAAGTTCGACATGGAGC TCATGAAAGACACTGACGATCATGTTCTCGAGCTCTACGAATTTCGGTTCAACATGAAGAGCGGTGCTGCTTTGCAGCGT CCACTCTCAAAGGGGCCAGCGGTGGAGTTTCCTCGCATCAACGAAAACTACATAGGAAGGAAGCAACGTTACGTGTATGC TGCCGTTTTCCACGATCAAGTGAGGATCAAAGGAGTGGCGAAGTTTGATCTCCACAAGGATCCCGAGCTCTCCAAGGATG GTGGTAATCCCGTTGGGAGCAATGTGGTCGGGGAGTTCATGTATGGAAGTCGCCGGTTTGGCTCCGAGGTGGTGTTTGTT CCAAAGAGCTCCGACAAGGACGCGGATGAAGACGATGGCTACCTCATCTCTTTTGTTTACGACGAACGGGCGGGCAAATC GGAGGCCGTCGTGATTGATGCGAAGACAATGGCAGCCGATCCAGTTGCTGTGGTCTCGATCCCTGTCAGGATTCCTTATG GTTTCCACTTGATATTTGTCAATGAGGTGAGATTGAGTTTCCTCATTGGTTTATTCCTTTTCTATTTCCCGAGTTTAGGA CCAGCTAGAGAACCAAGCATGATAATTGATCACGAAAAAATACGTGTAGATTCTGGACGATGTGTTCAAGAATTATTATA TATGTTGTAA |