Microexon ID Sm_GL377567:1433035-1433049:-
Species Selaginella moellendorffii
Coordinates GL377567:1433035..1433049
Microexon Cluster ID MEP45
Size 15
Phase 2
Pfam Domain Motif RPE65
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 47,15,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTTCGACGGAGATGG
Microexon Amino Acid seq WFDGDG
Microexon-tag DNA Seq CGCACTGGACCAAATCCGAGATTCGAGCCTACAGCAGGCTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTC
Microexon-tag Amino Acid Seq RTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYV
Microexon-tag spanning region1432919-1433154
Microexon-tag prediction score0.9012
Overlapped with the annotated transcript (%) 100
New Transcript ID EFJ36340x
Reference Transcript ID EFJ36340
Gene ID SELMODRAFT_165469
Gene Name NA
Transcript ID EFJ36340
Protein ID EFJ36340
Gene ID SELMODRAFT_165469
Gene Name NA
Pfam domain motif RPE65
Motif E-value 6e-129
Motif start 67
Motif end 540
Protein seq >EFJ36340
MGTERLRKESQDKFLGSLPLGVRIVQPRTPGIGARIAAKLCDGIEALLVQLFSGASSKSNLFLQENFAPVGESGPLADLP
VTGALPECLNGEFVRTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYVSRYVKTSKLKQEEFYGTPTFLKVGDLKGIL
GIFLANVFRLRVALGVVDAEYGMGTANTAMVYHNKKLLALLEADKPYAIRMLEDGNLETIGVLDYDKRLSHAVTAHPKVD
PVTGEMFFFCYQQQTPYVIYRVISKDGTLHDPVSINIPDPVMMHDFAITENYAVFMDLPMTFKPKNMGEGKMIISFDSTK
KSRFGVLPRYALSDSQMRWFHLPSCYIFHTANAWEDGDEVVLVACRMPKFDMELMKDTNDHVLELYEFRFNMKSGAALQR
PLSKGPAVEFPRINENYIGRKQRYVYAAVFHDQVRIKGVAKFDLHKDPELSRDGGNPVGSNVVGEFMYGGRRFGSEAVFV
PKSSDKDADEDDGYVISFVYDEGAGKSEAVVIDAKTMAADPVAVVSIPVRIPYGFHSIFVNEDQLENQA*
CDS seq >EFJ36340
ATGGGAACCGAGAGGCTGCGCAAGGAGAGCCAAGATAAGTTCCTGGGCAGCTTGCCCCTTGGCGTCCGGATCGTCCAGCC
AAGAACGCCGGGCATAGGAGCCAGGATTGCTGCCAAGCTTTGCGATGGGATCGAGGCTTTGCTCGTCCAGTTGTTTAGCG
GCGCTTCCAGCAAATCCAACCTGTTTCTTCAAGAGAACTTCGCGCCGGTTGGAGAGTCTGGGCCATTGGCGGACTTGCCA
GTAACTGGCGCTCTCCCGGAATGCTTGAATGGAGAATTCGTGCGCACTGGACCAAATCCGAGATTCGAGCCTACAGCAGG
CTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTCTCTCGCTACG
TGAAGACCTCCAAGTTAAAACAAGAGGAATTCTATGGCACTCCAACTTTCCTGAAGGTGGGAGACTTGAAAGGAATACTT
GGGATTTTCTTAGCGAATGTTTTTCGGCTGCGAGTTGCTCTCGGTGTTGTGGACGCAGAGTATGGCATGGGAACTGCCAA
TACAGCCATGGTGTATCACAACAAGAAACTTTTAGCACTATTAGAGGCTGACAAACCATATGCTATTCGAATGCTCGAAG
ATGGGAACCTTGAGACAATTGGCGTGCTTGACTATGACAAAAGATTGTCTCACGCTGTTACTGCTCATCCCAAAGTTGAC
CCTGTGACAGGCGAGATGTTTTTCTTCTGTTACCAACAGCAAACACCATACGTAATCTATCGCGTCATTTCGAAAGATGG
AACTTTGCATGATCCGGTAAGCATCAACATCCCCGACCCCGTGATGATGCACGACTTCGCAATCACGGAGAACTACGCAG
TTTTCATGGATCTTCCAATGACTTTTAAACCAAAGAACATGGGTGAAGGAAAAATGATAATCTCGTTTGACAGCACGAAG
AAGTCCCGCTTTGGAGTGCTGCCTCGCTATGCTCTCAGCGACAGCCAGATGCGCTGGTTTCATCTTCCAAGTTGTTATAT
TTTCCACACAGCAAATGCGTGGGAAGACGGGGACGAAGTAGTTCTCGTTGCTTGCCGCATGCCAAAGTTCGACATGGAGC
TCATGAAAGACACTAACGATCATGTTCTCGAGCTCTACGAATTTCGGTTCAACATGAAGAGCGGTGCTGCTTTGCAGCGT
CCACTGTCAAAGGGACCAGCGGTGGAGTTTCCTCGCATCAACGAAAACTACATAGGAAGGAAGCAACGTTACGTGTATGC
TGCCGTTTTCCACGATCAAGTGAGGATCAAAGGAGTGGCGAAGTTTGATCTCCACAAGGATCCCGAGCTCTCCAGGGATG
GTGGTAATCCCGTTGGGAGCAATGTGGTCGGGGAGTTCATGTATGGAGGTCGCCGGTTTGGCTCCGAGGCGGTGTTTGTT
CCAAAGAGCTCGGACAAGGACGCGGATGAAGACGATGGCTACGTCATCTCTTTTGTTTACGACGAAGGGGCGGGAAAATC
GGAGGCAGTCGTGATTGATGCCAAGACAATGGCAGCCGATCCAGTTGCTGTGGTCTCGATCCCTGTAAGGATTCCTTATG
GTTTCCATTCGATTTTTGTGAATGAGGACCAGCTAGAGAACCAAGCATGA
Microexon DNA seq GTTCGACGGAGATGG
Microexon Amino Acid seq WFDGDG
Microexon-tag DNA Seq CGCACTGGACCAAATCCGAGATTCGAGCCTACAGCAGGCTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTC
Microexon-tag Amino Acid seq RTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYV
Transcript ID EFJ36340
Gene ID Sm.2357
Gene Name NA
Pfam domain motif RPE65
Motif E-value 6e-129
Motif start 67
Motif end 540
Protein seq >EFJ36340
MGTERLRKESQDKFLGSLPLGVRIVQPRTPGIGARIAAKLCDGIEALLVQLFSGASSKSNLFLQENFAPVGESGPLADLP
VTGALPECLNGEFVRTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYVSRYVKTSKLKQEEFYGTPTFLKVGDLKGIL
GIFLANVFRLRVALGVVDAEYGMGTANTAMVYHNKKLLALLEADKPYAIRMLEDGNLETIGVLDYDKRLSHAVTAHPKVD
PVTGEMFFFCYQQQTPYVIYRVISKDGTLHDPVSINIPDPVMMHDFAITENYAVFMDLPMTFKPKNMGEGKMIISFDSTK
KSRFGVLPRYALSDSQMRWFHLPSCYIFHTANAWEDGDEVVLVACRMPKFDMELMKDTNDHVLELYEFRFNMKSGAALQR
PLSKGPAVEFPRINENYIGRKQRYVYAAVFHDQVRIKGVAKFDLHKDPELSRDGGNPVGSNVVGEFMYGGRRFGSEAVFV
PKSSDKDADEDDGYVISFVYDEGAGKSEAVVIDAKTMAADPVAVVSIPVRIPYGFHSIFVNEDQLENQA*
CDS seq >EFJ36340
ATGGGAACCGAGAGGCTGCGCAAGGAGAGCCAAGATAAGTTCCTGGGCAGCTTGCCCCTTGGCGTCCGGATCGTCCAGCC
AAGAACGCCGGGCATAGGAGCCAGGATTGCTGCCAAGCTTTGCGATGGGATCGAGGCTTTGCTCGTCCAGTTGTTTAGCG
GCGCTTCCAGCAAATCCAACCTGTTTCTTCAAGAGAACTTCGCGCCGGTTGGAGAGTCTGGGCCATTGGCGGACTTGCCA
GTAACTGGCGCTCTCCCGGAATGCTTGAATGGAGAATTCGTGCGCACTGGACCAAATCCGAGATTCGAGCCTACAGCAGG
CTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTCTCTCGCTACG
TGAAGACCTCCAAGTTAAAACAAGAGGAATTCTATGGCACTCCAACTTTCCTGAAGGTGGGAGACTTGAAAGGAATACTT
GGGATTTTCTTAGCGAATGTTTTTCGGCTGCGAGTTGCTCTCGGTGTTGTGGACGCAGAGTATGGCATGGGAACTGCCAA
TACAGCCATGGTGTATCACAACAAGAAACTTTTAGCACTATTAGAGGCTGACAAACCATATGCTATTCGAATGCTCGAAG
ATGGGAACCTTGAGACAATTGGCGTGCTTGACTATGACAAAAGATTGTCTCACGCTGTTACTGCTCATCCCAAAGTTGAC
CCTGTGACAGGCGAGATGTTTTTCTTCTGTTACCAACAGCAAACACCATACGTAATCTATCGCGTCATTTCGAAAGATGG
AACTTTGCATGATCCGGTAAGCATCAACATCCCCGACCCCGTGATGATGCACGACTTCGCAATCACGGAGAACTACGCAG
TTTTCATGGATCTTCCAATGACTTTTAAACCAAAGAACATGGGTGAAGGAAAAATGATAATCTCGTTTGACAGCACGAAG
AAGTCCCGCTTTGGAGTGCTGCCTCGCTATGCTCTCAGCGACAGCCAGATGCGCTGGTTTCATCTTCCAAGTTGTTATAT
TTTCCACACAGCAAATGCGTGGGAAGACGGGGACGAAGTAGTTCTCGTTGCTTGCCGCATGCCAAAGTTCGACATGGAGC
TCATGAAAGACACTAACGATCATGTTCTCGAGCTCTACGAATTTCGGTTCAACATGAAGAGCGGTGCTGCTTTGCAGCGT
CCACTGTCAAAGGGACCAGCGGTGGAGTTTCCTCGCATCAACGAAAACTACATAGGAAGGAAGCAACGTTACGTGTATGC
TGCCGTTTTCCACGATCAAGTGAGGATCAAAGGAGTGGCGAAGTTTGATCTCCACAAGGATCCCGAGCTCTCCAGGGATG
GTGGTAATCCCGTTGGGAGCAATGTGGTCGGGGAGTTCATGTATGGAGGTCGCCGGTTTGGCTCCGAGGCGGTGTTTGTT
CCAAAGAGCTCGGACAAGGACGCGGATGAAGACGATGGCTACGTCATCTCTTTTGTTTACGACGAAGGGGCGGGAAAATC
GGAGGCAGTCGTGATTGATGCCAAGACAATGGCAGCCGATCCAGTTGCTGTGGTCTCGATCCCTGTAAGGATTCCTTATG
GTTTCCATTCGATTTTTGTGAATGAGGACCAGCTAGAGAACCAAGCATGA