
Microexon ID | Sm_GL377567:1433035-1433049:- |
Species | Selaginella moellendorffii | Coordinates | GL377567:1433035..1433049 |
Microexon Cluster ID | MEP45 |
Size | 15 |
Phase | 2 |
Pfam Domain Motif | RPE65 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTCGACGGAGATGG |
Microexon Amino Acid seq | WFDGDG |
Microexon-tag DNA Seq | CGCACTGGACCAAATCCGAGATTCGAGCCTACAGCAGGCTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTC |
Microexon-tag Amino Acid Seq | RTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYV |
Microexon-tag spanning region | 1432919-1433154 |
Microexon-tag prediction score | 0.9012 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EFJ36340x |
Reference Transcript ID | EFJ36340 |
Gene ID | SELMODRAFT_165469 |
Gene Name | NA |
Transcript ID | EFJ36340 |
Protein ID | EFJ36340 |
Gene ID | SELMODRAFT_165469 |
Gene Name | NA |
Pfam domain motif | RPE65 |
Motif E-value | 6e-129 |
Motif start | 67 |
Motif end | 540 |
Protein seq | >EFJ36340 MGTERLRKESQDKFLGSLPLGVRIVQPRTPGIGARIAAKLCDGIEALLVQLFSGASSKSNLFLQENFAPVGESGPLADLP VTGALPECLNGEFVRTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYVSRYVKTSKLKQEEFYGTPTFLKVGDLKGIL GIFLANVFRLRVALGVVDAEYGMGTANTAMVYHNKKLLALLEADKPYAIRMLEDGNLETIGVLDYDKRLSHAVTAHPKVD PVTGEMFFFCYQQQTPYVIYRVISKDGTLHDPVSINIPDPVMMHDFAITENYAVFMDLPMTFKPKNMGEGKMIISFDSTK KSRFGVLPRYALSDSQMRWFHLPSCYIFHTANAWEDGDEVVLVACRMPKFDMELMKDTNDHVLELYEFRFNMKSGAALQR PLSKGPAVEFPRINENYIGRKQRYVYAAVFHDQVRIKGVAKFDLHKDPELSRDGGNPVGSNVVGEFMYGGRRFGSEAVFV PKSSDKDADEDDGYVISFVYDEGAGKSEAVVIDAKTMAADPVAVVSIPVRIPYGFHSIFVNEDQLENQA* |
CDS seq | >EFJ36340 ATGGGAACCGAGAGGCTGCGCAAGGAGAGCCAAGATAAGTTCCTGGGCAGCTTGCCCCTTGGCGTCCGGATCGTCCAGCC AAGAACGCCGGGCATAGGAGCCAGGATTGCTGCCAAGCTTTGCGATGGGATCGAGGCTTTGCTCGTCCAGTTGTTTAGCG GCGCTTCCAGCAAATCCAACCTGTTTCTTCAAGAGAACTTCGCGCCGGTTGGAGAGTCTGGGCCATTGGCGGACTTGCCA GTAACTGGCGCTCTCCCGGAATGCTTGAATGGAGAATTCGTGCGCACTGGACCAAATCCGAGATTCGAGCCTACAGCAGG CTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTCTCTCGCTACG TGAAGACCTCCAAGTTAAAACAAGAGGAATTCTATGGCACTCCAACTTTCCTGAAGGTGGGAGACTTGAAAGGAATACTT GGGATTTTCTTAGCGAATGTTTTTCGGCTGCGAGTTGCTCTCGGTGTTGTGGACGCAGAGTATGGCATGGGAACTGCCAA TACAGCCATGGTGTATCACAACAAGAAACTTTTAGCACTATTAGAGGCTGACAAACCATATGCTATTCGAATGCTCGAAG ATGGGAACCTTGAGACAATTGGCGTGCTTGACTATGACAAAAGATTGTCTCACGCTGTTACTGCTCATCCCAAAGTTGAC CCTGTGACAGGCGAGATGTTTTTCTTCTGTTACCAACAGCAAACACCATACGTAATCTATCGCGTCATTTCGAAAGATGG AACTTTGCATGATCCGGTAAGCATCAACATCCCCGACCCCGTGATGATGCACGACTTCGCAATCACGGAGAACTACGCAG TTTTCATGGATCTTCCAATGACTTTTAAACCAAAGAACATGGGTGAAGGAAAAATGATAATCTCGTTTGACAGCACGAAG AAGTCCCGCTTTGGAGTGCTGCCTCGCTATGCTCTCAGCGACAGCCAGATGCGCTGGTTTCATCTTCCAAGTTGTTATAT TTTCCACACAGCAAATGCGTGGGAAGACGGGGACGAAGTAGTTCTCGTTGCTTGCCGCATGCCAAAGTTCGACATGGAGC TCATGAAAGACACTAACGATCATGTTCTCGAGCTCTACGAATTTCGGTTCAACATGAAGAGCGGTGCTGCTTTGCAGCGT CCACTGTCAAAGGGACCAGCGGTGGAGTTTCCTCGCATCAACGAAAACTACATAGGAAGGAAGCAACGTTACGTGTATGC TGCCGTTTTCCACGATCAAGTGAGGATCAAAGGAGTGGCGAAGTTTGATCTCCACAAGGATCCCGAGCTCTCCAGGGATG GTGGTAATCCCGTTGGGAGCAATGTGGTCGGGGAGTTCATGTATGGAGGTCGCCGGTTTGGCTCCGAGGCGGTGTTTGTT CCAAAGAGCTCGGACAAGGACGCGGATGAAGACGATGGCTACGTCATCTCTTTTGTTTACGACGAAGGGGCGGGAAAATC GGAGGCAGTCGTGATTGATGCCAAGACAATGGCAGCCGATCCAGTTGCTGTGGTCTCGATCCCTGTAAGGATTCCTTATG GTTTCCATTCGATTTTTGTGAATGAGGACCAGCTAGAGAACCAAGCATGA |
Microexon DNA seq | GTTCGACGGAGATGG |
Microexon Amino Acid seq | WFDGDG |
Microexon-tag DNA Seq | CGCACTGGACCAAATCCGAGATTCGAGCCTACAGCAGGCTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTC |
Microexon-tag Amino Acid seq | RTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYV |
Transcript ID | EFJ36340 |
Gene ID | Sm.2357 |
Gene Name | NA |
Pfam domain motif | RPE65 |
Motif E-value | 6e-129 |
Motif start | 67 |
Motif end | 540 |
Protein seq | >EFJ36340 MGTERLRKESQDKFLGSLPLGVRIVQPRTPGIGARIAAKLCDGIEALLVQLFSGASSKSNLFLQENFAPVGESGPLADLP VTGALPECLNGEFVRTGPNPRFEPTAGYHWFDGDGMLHGLRIKDGKANYVSRYVKTSKLKQEEFYGTPTFLKVGDLKGIL GIFLANVFRLRVALGVVDAEYGMGTANTAMVYHNKKLLALLEADKPYAIRMLEDGNLETIGVLDYDKRLSHAVTAHPKVD PVTGEMFFFCYQQQTPYVIYRVISKDGTLHDPVSINIPDPVMMHDFAITENYAVFMDLPMTFKPKNMGEGKMIISFDSTK KSRFGVLPRYALSDSQMRWFHLPSCYIFHTANAWEDGDEVVLVACRMPKFDMELMKDTNDHVLELYEFRFNMKSGAALQR PLSKGPAVEFPRINENYIGRKQRYVYAAVFHDQVRIKGVAKFDLHKDPELSRDGGNPVGSNVVGEFMYGGRRFGSEAVFV PKSSDKDADEDDGYVISFVYDEGAGKSEAVVIDAKTMAADPVAVVSIPVRIPYGFHSIFVNEDQLENQA* |
CDS seq | >EFJ36340 ATGGGAACCGAGAGGCTGCGCAAGGAGAGCCAAGATAAGTTCCTGGGCAGCTTGCCCCTTGGCGTCCGGATCGTCCAGCC AAGAACGCCGGGCATAGGAGCCAGGATTGCTGCCAAGCTTTGCGATGGGATCGAGGCTTTGCTCGTCCAGTTGTTTAGCG GCGCTTCCAGCAAATCCAACCTGTTTCTTCAAGAGAACTTCGCGCCGGTTGGAGAGTCTGGGCCATTGGCGGACTTGCCA GTAACTGGCGCTCTCCCGGAATGCTTGAATGGAGAATTCGTGCGCACTGGACCAAATCCGAGATTCGAGCCTACAGCAGG CTACCACTGGTTCGACGGAGATGGAATGCTGCATGGTCTGCGAATCAAGGACGGGAAAGCAAACTATGTCTCTCGCTACG TGAAGACCTCCAAGTTAAAACAAGAGGAATTCTATGGCACTCCAACTTTCCTGAAGGTGGGAGACTTGAAAGGAATACTT GGGATTTTCTTAGCGAATGTTTTTCGGCTGCGAGTTGCTCTCGGTGTTGTGGACGCAGAGTATGGCATGGGAACTGCCAA TACAGCCATGGTGTATCACAACAAGAAACTTTTAGCACTATTAGAGGCTGACAAACCATATGCTATTCGAATGCTCGAAG ATGGGAACCTTGAGACAATTGGCGTGCTTGACTATGACAAAAGATTGTCTCACGCTGTTACTGCTCATCCCAAAGTTGAC CCTGTGACAGGCGAGATGTTTTTCTTCTGTTACCAACAGCAAACACCATACGTAATCTATCGCGTCATTTCGAAAGATGG AACTTTGCATGATCCGGTAAGCATCAACATCCCCGACCCCGTGATGATGCACGACTTCGCAATCACGGAGAACTACGCAG TTTTCATGGATCTTCCAATGACTTTTAAACCAAAGAACATGGGTGAAGGAAAAATGATAATCTCGTTTGACAGCACGAAG AAGTCCCGCTTTGGAGTGCTGCCTCGCTATGCTCTCAGCGACAGCCAGATGCGCTGGTTTCATCTTCCAAGTTGTTATAT TTTCCACACAGCAAATGCGTGGGAAGACGGGGACGAAGTAGTTCTCGTTGCTTGCCGCATGCCAAAGTTCGACATGGAGC TCATGAAAGACACTAACGATCATGTTCTCGAGCTCTACGAATTTCGGTTCAACATGAAGAGCGGTGCTGCTTTGCAGCGT CCACTGTCAAAGGGACCAGCGGTGGAGTTTCCTCGCATCAACGAAAACTACATAGGAAGGAAGCAACGTTACGTGTATGC TGCCGTTTTCCACGATCAAGTGAGGATCAAAGGAGTGGCGAAGTTTGATCTCCACAAGGATCCCGAGCTCTCCAGGGATG GTGGTAATCCCGTTGGGAGCAATGTGGTCGGGGAGTTCATGTATGGAGGTCGCCGGTTTGGCTCCGAGGCGGTGTTTGTT CCAAAGAGCTCGGACAAGGACGCGGATGAAGACGATGGCTACGTCATCTCTTTTGTTTACGACGAAGGGGCGGGAAAATC GGAGGCAGTCGTGATTGATGCCAAGACAATGGCAGCCGATCCAGTTGCTGTGGTCTCGATCCCTGTAAGGATTCCTTATG GTTTCCATTCGATTTTTGTGAATGAGGACCAGCTAGAGAACCAAGCATGA |