| Microexon ID | Sl_1:82081821-82081835:- |
| Species | Solanum Lycopersicum | Coordinates | 1:82081821..82081835 |
| Microexon Cluster ID | MEP45 |
| Size | 15 |
| Phase | 2 |
| Pfam Domain Motif | RPE65 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GTTTGATGGAGATGG |
| Microexon Amino Acid seq | WFDGDG |
| Microexon-tag DNA Seq | AGGGTTGGTCCAAATCCTAAATTTGCTCCAGTTGCTGGATACCATTGGTTTGATGGAGATGGCATGATTCATGGCTTGCAAATTAAGGATGGAAAAGCAACATATGTC |
| Microexon-tag Amino Acid Seq | RVGPNPKFAPVAGYHWFDGDGMIHGLQIKDGKATYV |
| Microexon-tag spanning region | 82081055-82082084 |
| Microexon-tag prediction score | 0.974 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Solyc01g087260.3.1x |
| Reference Transcript ID | Solyc01g087260.3.1 |
| Gene ID | Solyc01g087260.3 |
| Gene Name | CCD1B |
| Transcript ID | Solyc01g087260.3.1 |
| Protein ID | |
| Gene ID | Solyc01g087260.3 |
| Gene Name | |
| Pfam domain motif | RPE65 |
| Motif E-value | 2.80E-35 |
| Motif start | 56 |
| Motif end | 195 |
| Protein seq | >Solyc01g087260.3.1 MGMNEEDGVARIEGVVVVDPKPQNGVAAKAIDWVEWAIIKLMNDSTKPLPFLQGNFAPTDETPPLKNLPVIGHLPECLNG EFVRVGPNPKFAPVAGYHWFDGDGMIHGLQIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLFSVYIYMLR EKLKVLDTSYGNGTANTAMIYHHGKLLALHEGDKPCS* |
| CDS seq | >Solyc01g087260.3.1 ATGGGGATGAATGAAGAAGATGGAGTGGCGAGAATTGAAGGAGTAGTGGTGGTTGATCCAAAACCACAAAATGGAGTCGC TGCAAAGGCGATAGACTGGGTAGAATGGGCGATTATCAAATTGATGAATGATTCTACCAAGCCACTCCCCTTTCTTCAGG GCAATTTTGCACCTACCGATGAAACTCCTCCACTTAAAAACCTTCCCGTTATAGGCCATCTGCCGGAGTGCCTGAATGGT GAGTTTGTTAGGGTTGGTCCAAATCCTAAATTTGCTCCAGTTGCTGGATACCATTGGTTTGATGGAGATGGCATGATTCA TGGCTTGCAAATTAAGGATGGAAAAGCAACATATGTCTCACGTTTTGTGAGGACATCACGTCTTAAGCAAGAAGAGTTCT TTGGAGGAGCTAAGTTTATGAAGATTGGAGATCTTAAAGGGCTGTTCGGGTTGTTCTCAGTATATATATACATGCTCAGG GAAAAGCTGAAAGTTTTGGACACTTCCTATGGAAATGGCACAGCTAATACAGCTATGATATATCACCATGGGAAGCTTTT GGCTCTTCATGAGGGTGATAAACCATGTAGTTAA |
Sl_1:82081821-82081835:- does not have available information here.