| Microexon ID | Sl_1:82068402-82068416:- |
| Species | Solanum Lycopersicum | Coordinates | 1:82068402..82068416 |
| Microexon Cluster ID | MEP45 |
| Size | 15 |
| Phase | 2 |
| Pfam Domain Motif | RPE65 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GTTTGATGGGGATGG |
| Microexon Amino Acid seq | WFDGDG |
| Microexon-tag DNA Seq | AGAGTTGGTCCAAATCCAAAGTTTGCTCCGGTTGCTGGATATCACTGGTTTGATGGGGATGGCATGATTCATGGCTTGCGCATTAAAGATGGAAAAGCAACGTATGTC |
| Microexon-tag Amino Acid Seq | RVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYV |
| Microexon-tag spanning region | 82067825-82068586 |
| Microexon-tag prediction score | 0.985 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Solyc01g087250.3.1x |
| Reference Transcript ID | Solyc01g087250.3.1 |
| Gene ID | Solyc01g087250.3 |
| Gene Name | CCD1A |
| Transcript ID | Solyc01g087250.3.1 |
| Protein ID | |
| Gene ID | Solyc01g087250.3 |
| Gene Name | |
| Pfam domain motif | RPE65 |
| Motif E-value | 1.00E-143 |
| Motif start | 59 |
| Motif end | 534 |
| Protein seq | >Solyc01g087250.3.1 MGRKEDDGVERIEGGVVVVNPKPRRGITAKAIDLLEWGIVKLMHDSSKPLHYLQGNFAPTDETPPLNDLVVQGHLPECLN GEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRYVRTSRLKQEEFFGGAKFMKVGDLKGLFGLFTVYMQML RTKLKVLDISYGNSTANTALVYHHGKLLALSEADKPYALKVLEDGDLQTLGMLDYDKRLTHSFTAHPKVDAVTGEMFTFG YAHTPPYITYRVISKDGIMQDPVPITIPEPIMMHDFAITENYAIMMDLPLCFRPKEMVKKNKLAFTFDATKKARFGVLPR YANNEALIRWFELPNCFIFHNANAWEEGDEVVLITCRLVNPDLDMVNGAVKEKLENFCNELYEMRFNMKSGAASQKKLSE SAVDFPRINENYTGRKQRYVYGTTLNSIAKVTGVIKFDLHAEPETGKSQLEVGGNVQGIFDLGPGRFGSEAVFVPSRPGT EREEDDGYLIFFVHDENTGKSAVNVIDAKTMSAEPVAVVELPKRVPYGFHAFFVTEEQIQEQAKL* |
| CDS seq | >Solyc01g087250.3.1 ATGGGGAGAAAAGAAGATGATGGAGTAGAGAGAATTGAAGGAGGAGTAGTGGTGGTGAACCCAAAGCCACGGAGAGGAAT AACTGCGAAAGCCATAGACTTGTTGGAATGGGGAATCGTCAAATTAATGCACGATTCCTCTAAGCCACTTCACTATCTTC AAGGCAATTTTGCACCTACCGATGAAACTCCTCCTCTTAATGACCTTGTTGTACAAGGTCATCTTCCGGAGTGCCTTAAT GGTGAATTTGTTAGAGTTGGTCCAAATCCAAAGTTTGCTCCGGTTGCTGGATATCACTGGTTTGATGGGGATGGCATGAT TCATGGCTTGCGCATTAAAGATGGAAAAGCAACGTATGTCTCACGTTATGTGAGGACTTCACGTCTAAAGCAAGAAGAGT TCTTTGGTGGAGCTAAGTTTATGAAGGTTGGAGATCTTAAAGGGCTGTTTGGTCTGTTCACAGTTTATATGCAAATGCTC AGAACAAAGCTGAAAGTATTGGACATCTCCTATGGAAATAGCACAGCTAATACAGCTCTAGTATATCACCATGGGAAGCT GTTGGCACTTTCAGAGGCTGATAAACCTTATGCACTTAAAGTTCTAGAGGATGGAGATCTTCAAACACTTGGCATGCTGG ATTATGACAAACGATTGACGCATTCCTTCACTGCCCATCCAAAAGTTGATGCTGTAACTGGTGAGATGTTTACCTTTGGA TATGCTCACACCCCACCTTACATCACTTATAGGGTTATATCCAAGGATGGAATTATGCAGGACCCGGTCCCAATAACAAT ACCAGAGCCTATCATGATGCATGATTTTGCTATTACTGAAAATTATGCAATTATGATGGATCTTCCTTTGTGTTTTCGTC CGAAGGAAATGGTGAAAAAGAATAAGCTAGCTTTTACCTTTGATGCTACTAAAAAAGCTCGATTTGGAGTCCTTCCACGA TATGCCAACAATGAGGCTCTAATCAGGTGGTTCGAGCTTCCTAATTGCTTCATTTTTCACAATGCCAATGCTTGGGAGGA GGGAGATGAAGTCGTGTTGATTACCTGCCGCCTTGTGAACCCAGACCTAGACATGGTCAATGGAGCTGTTAAAGAAAAGC TTGAGAATTTCTGCAATGAGCTATATGAAATGAGATTTAACATGAAGAGTGGTGCAGCTTCACAGAAGAAATTATCGGAG TCTGCTGTTGATTTTCCAAGGATCAACGAGAACTACACAGGCAGGAAGCAGCGTTATGTGTATGGAACCACTTTGAACAG CATTGCTAAGGTAACTGGAGTCATCAAATTTGATTTGCATGCTGAACCAGAGACTGGAAAATCACAGCTTGAAGTTGGAG GGAATGTTCAAGGTATCTTTGATCTAGGACCTGGCAGATTTGGTTCGGAGGCTGTATTTGTTCCCAGTCGGCCTGGTACA GAACGTGAAGAGGATGATGGCTACTTGATATTCTTCGTTCATGACGAGAACACCGGAAAGTCAGCTGTGAATGTAATTGA TGCAAAAACAATGTCCGCGGAGCCTGTGGCAGTGGTTGAATTACCCAAAAGAGTTCCTTATGGGTTCCATGCTTTCTTTG TCACAGAGGAACAAATTCAAGAACAAGCCAAACTGTGA |
Sl_1:82068402-82068416:- does not have available information here.