| Microexon ID | Pt_9:6260765-6260779:+ |
| Species | Populus Trichocarpa | Coordinates | 9:6260765..6260779 |
| Microexon Cluster ID | MEP45 |
| Size | 15 |
| Phase | 2 |
| Pfam Domain Motif | RPE65 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GTTTGATGGAGATGG |
| Microexon Amino Acid seq | WFDGDG |
| Microexon-tag DNA Seq | AGGGTGGGTCCAAACCCGAAGCTTGTACCAGTGGCTGGATACCATTGGTTTGATGGAGATGGAATGATTCATGGTATGCGCATTAAAGATGGAAAAGCAGCATATGTC |
| Microexon-tag Amino Acid Seq | RVGPNPKLVPVAGYHWFDGDGMIHGMRIKDGKAAYV |
| Microexon-tag spanning region | 6260600-6261898 |
| Microexon-tag prediction score | 0.9751 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.009G060500.2.v4.1x |
| Reference Transcript ID | Potri.009G060500.2.v4.1 |
| Gene ID | Potri.009G060500.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.009G060500.10.v4.1 |
| Protein ID | |
| Gene ID | Potri.009G060500.v4.1 |
| Gene Name | |
| Pfam domain motif | RPE65 |
| Motif E-value | 6.90E-133 |
| Motif start | 62 |
| Motif end | 557 |
| Protein seq | >Potri.009G060500.10.v4.1 MAEKSQVEKKQEIGVGAGSTVVEVNPKPQKGLTSKLIDYLEKLIVKLMYDTSQSHHYLSGNFAPVPDETPPVKDLPVKGY LPDCLNGEFVRVGPNPKLVPVAGYHWFDGDGVDVYRMSSFNEVTHRKMIHGMRIKDGKAAYVRRFVRTSRLKQEEFFGGA KFMKVGDLKGLFGLLMVNMQMLRAKTKVLDMSYGNGTGNTNLIYHHGKLLALQEADKPYVVKVMEDGDLQTIGLLDYEKR LKHSFTAHPKVDPFTGEMFTFGYSHEPPYVTYRVISKDGVMHDPVPITISEPIMMHDFAITENYAIFMDLPLYFRPKEMV KEKKLIFTFDATKKARFGVLPRYAKDDLLIKWFELPNCFIFHNANAWEEEDEIVLITCRVQNPDLDMVSGDVKEKLENFS NELYEMRFNMKSGVASQKKLSESAVDFPRVNESYTGRKQRYVYGTILDSIAKVTGVVKFDLHAEPEPGKGKIEVGGNVKG IFDLGPGRFGSEAVFVPSKPGTTSEEDDGYLIFFAHDESTGKSSVNVIDAKTMSADPVAVVELPHRVPYGFHAFFVSEEQ LQEQAKL* |
| CDS seq | >Potri.009G060500.10.v4.1 ATGGCGGAGAAATCACAAGTTGAGAAAAAGCAAGAGATCGGCGTCGGAGCAGGAAGCACGGTAGTGGAAGTGAATCCAAA GCCACAAAAAGGACTTACTTCAAAACTTATTGACTACTTGGAAAAGCTGATTGTTAAATTAATGTATGATACCTCTCAAT CTCACCATTACCTCTCCGGCAACTTCGCTCCCGTTCCTGATGAAACTCCTCCTGTTAAAGACCTTCCCGTTAAAGGCTAC CTACCTGATTGCCTGAATGGGGAATTTGTGAGGGTGGGTCCAAACCCGAAGCTTGTACCAGTGGCTGGATACCATTGGTT TGATGGAGATGGAGTCGATGTTTATAGAATGTCAAGTTTTAATGAAGTCACCCACCGAAAAATGATTCATGGTATGCGCA TTAAAGATGGAAAAGCAGCATATGTCCGTCGTTTTGTGAGGACATCAAGACTTAAACAAGAAGAGTTTTTTGGAGGTGCC AAATTTATGAAGGTTGGAGACCTCAAAGGGCTTTTTGGATTACTTATGGTTAACATGCAAATGCTTCGAGCAAAAACAAA AGTATTGGACATGTCATATGGAAATGGGACTGGTAATACAAATCTCATTTATCACCATGGAAAACTTTTGGCACTTCAAG AGGCTGATAAACCCTATGTGGTTAAAGTTATGGAAGATGGAGATCTGCAAACTATTGGCCTGTTGGATTATGAAAAAAGA CTAAAACATTCTTTCACTGCTCATCCAAAGGTGGATCCATTCACTGGAGAGATGTTTACCTTTGGCTATTCACATGAACC ACCATATGTGACATACAGAGTCATTTCAAAGGATGGTGTCATGCATGACCCTGTACCAATAACTATATCAGAACCCATAA TGATGCATGACTTTGCAATTACAGAGAACTATGCAATTTTTATGGATCTTCCTTTGTACTTCCGACCGAAGGAAATGGTG AAAGAAAAGAAGCTCATATTCACATTTGATGCAACAAAAAAAGCTCGTTTTGGTGTCCTTCCACGATATGCAAAGGATGA CCTCCTAATCAAATGGTTTGAGCTTCCAAATTGCTTCATATTCCACAATGCCAATGCCTGGGAGGAGGAGGATGAAATTG TTTTAATCACTTGCCGCGTTCAAAATCCAGATTTGGACATGGTCAGTGGGGATGTCAAAGAAAAGCTTGAGAATTTTTCA AATGAGCTGTATGAGATGAGATTCAATATGAAAAGTGGTGTAGCTTCACAAAAGAAACTATCAGAATCTGCAGTTGATTT TCCCAGGGTGAATGAGAGTTACACTGGGAGGAAACAAAGATATGTGTACGGGACAATTCTAGACAGCATTGCAAAGGTTA CAGGGGTTGTTAAATTTGATCTACATGCAGAGCCTGAACCAGGAAAAGGAAAGATTGAGGTTGGAGGAAATGTCAAAGGC ATCTTTGACCTTGGTCCTGGTAGATTTGGTTCAGAGGCTGTATTTGTCCCTAGTAAGCCAGGCACCACTTCCGAGGAAGA TGATGGCTACCTGATATTCTTCGCACATGATGAAAGTACCGGAAAATCATCAGTGAATGTGATTGATGCAAAAACCATGT CAGCTGATCCTGTTGCAGTTGTTGAGTTACCCCACAGAGTTCCATATGGGTTCCATGCCTTCTTTGTGTCAGAGGAACAA CTTCAAGAACAGGCAAAACTGTAA |
Pt_9:6260765-6260779:+ does not have available information here.