| Microexon ID | Pt_1:28079083-28079097:+ |
| Species | Populus Trichocarpa | Coordinates | 1:28079083..28079097 |
| Microexon Cluster ID | MEP45 |
| Size | 15 |
| Phase | 2 |
| Pfam Domain Motif | RPE65 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GTTTGATGGAGACGG |
| Microexon Amino Acid seq | WFDGDG |
| Microexon-tag DNA Seq | AGGGTGGGTCCTAACCCGAAGTTTGCACCTGTGGCTGGATACAATTGGTTTGATGGAGACGGAATGATTCATGGTATGCGCATCAAGGATGGAAAGGCAGCATATGTC |
| Microexon-tag Amino Acid Seq | RVGPNPKFAPVAGYNWFDGDGMIHGMRIKDGKAAYV |
| Microexon-tag spanning region | 28078944-28080152 |
| Microexon-tag prediction score | 0.9722 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.001G265900.3.v4.1x |
| Reference Transcript ID | Potri.001G265900.3.v4.1 |
| Gene ID | Potri.001G265900.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.001G265900.3.v4.1 |
| Protein ID | |
| Gene ID | Potri.001G265900.v4.1 |
| Gene Name | |
| Pfam domain motif | RPE65 |
| Motif E-value | 2.00E-140 |
| Motif start | 57 |
| Motif end | 535 |
| Protein seq | >Potri.001G265900.3.v4.1 MAEKKQEDGVGAGCPIVEVNPKPQKGLTSKLVDCLEKLIMKLMHDTSQSHPYLSGNFAPVEETAPVKDLPVEGHLPECMN GEFVRVGPNPKFAPVAGYNWFDGDGMIHGMRIKDGKAAYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNIQIL RLKTKVLDRSYGIGTGNTNLIYHNGKLLALQEADKPYVVKVMEDGDLQTLGLLDYDKRLKHPFTAHPKVDPFTGEMFTFG YSHEPPYVTYRVISKDGAMHDPVPITISDPIMMHDFAITENYAVFLDLPLYFRPKEMVKDKKFIFTFDATKKARFGVLPR YAKDDLLIKWFELPNCFIFHNANAWEEEDEIVLITCRLQDPGLDVANGAVKEKQENFVDELYEMRFNMKTGVASQKKLSE SAVDFPRVNESYTGRKQRYVYGTLLDSIAKVTGIVKFDLHSEPEPGKGKIEVGGNVKGIFDLGPGRFGSEAIFIPREPGT TSEEDDGYLIFFAHDENTGKSSVNVIDAKTMSANPVAVVELPHRVPYGFHAFFVSEEQLQEQEKL* |
| CDS seq | >Potri.001G265900.3.v4.1 ATGGCGGAGAAAAAGCAAGAGGACGGCGTCGGAGCTGGATGCCCAATAGTGGAGGTGAATCCAAAGCCGCAAAAAGGACT GACTTCAAAACTCGTCGACTGCTTGGAAAAGCTGATTATGAAATTGATGCATGATACCTCTCAATCACATCCTTATCTCT CCGGTAACTTCGCTCCGGTTGAAGAAACTGCTCCCGTTAAGGACCTTCCTGTCGAAGGTCACCTCCCTGAATGCATGAAT GGGGAGTTTGTGAGGGTGGGTCCTAACCCGAAGTTTGCACCTGTGGCTGGATACAATTGGTTTGATGGAGACGGAATGAT TCATGGTATGCGCATCAAGGATGGAAAGGCAGCATATGTCAGTCGATTTGTCAGGACATCACGACTTAAACAAGAAGAGT TTTTTGGAGGTGCCAAGTTTATGAAGATTGGAGACCTCAAGGGGCTGTTTGGATTGCTTATGGTTAACATACAAATACTT CGACTGAAAACAAAAGTATTGGACAGGTCATATGGAATTGGGACCGGCAATACAAATCTCATTTATCACAATGGAAAACT TTTAGCACTTCAAGAGGCTGATAAACCCTACGTGGTTAAAGTTATGGAAGATGGAGATCTGCAAACTCTTGGCCTGTTGG ATTACGACAAAAGACTAAAACATCCTTTCACTGCTCATCCAAAGGTGGATCCATTCACTGGAGAGATGTTTACCTTTGGG TATTCACATGAACCACCATATGTGACATACAGAGTCATTTCAAAGGATGGTGCCATGCATGACCCTGTACCAATAACAAT ATCAGACCCCATCATGATGCATGACTTTGCAATTACAGAGAACTATGCAGTTTTTTTGGATCTTCCTTTGTACTTCCGAC CAAAGGAAATGGTGAAAGATAAGAAGTTCATATTCACATTTGATGCAACAAAAAAAGCTCGTTTTGGTGTCCTTCCACGA TATGCTAAGGATGACCTCCTAATCAAATGGTTTGAGCTTCCAAATTGCTTCATATTCCACAATGCCAATGCCTGGGAGGA GGAGGATGAGATTGTTTTAATCACTTGCCGCCTTCAAGATCCAGGGTTGGATGTGGCCAATGGGGCTGTCAAAGAAAAGC AAGAGAATTTTGTAGATGAACTGTATGAGATGAGATTCAATATGAAAACTGGTGTAGCTTCACAAAAGAAACTATCAGAA TCTGCTGTTGATTTTCCCAGGGTGAATGAGAGTTACACTGGCAGGAAACAAAGATATGTATACGGAACCCTTCTGGACAG CATTGCAAAGGTCACAGGGATTGTCAAATTTGATCTACATTCAGAGCCTGAGCCAGGAAAAGGAAAGATTGAAGTTGGAG GAAACGTCAAAGGCATCTTTGACCTTGGTCCTGGTAGATTTGGTTCAGAGGCTATCTTTATCCCTCGTGAGCCAGGCACC ACTTCCGAGGAAGATGATGGCTACCTGATATTCTTTGCACATGATGAAAATACTGGAAAATCATCAGTGAATGTAATTGA TGCAAAAACAATGTCAGCCAATCCTGTTGCAGTTGTTGAGTTACCACACAGAGTTCCATATGGGTTCCATGCCTTCTTTG TTTCAGAGGAACAACTTCAAGAACAGGAAAAACTGTAA |
Pt_1:28079083-28079097:+ does not have available information here.