Microexon ID Ps_NW_020627707.1:6006078-6006092:-
Species Papaver somniferum
Coordinates NW_020627707.1:6006078..6006092
Microexon Cluster ID MEP45
Size 15
Phase 2
Pfam Domain Motif RPE65
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 47,15,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTACGATGGAGACGG
Microexon Amino Acid seq WYDGDG
Microexon-tag DNA Seq ATGGTCGGTCCAAATCCCAAGTTTAAGCCTGTCGCTGGATATCACTGGTACGATGGAGACGGAATGGTTCATGGTTTGCGAATTAAAGATGGAAAGGCAACATATGTT
Microexon-tag Amino Acid Seq MVGPNPKFKPVAGYHWYDGDGMVHGLRIKDGKATYV
Microexon-tag spanning region6005814-6006313
Microexon-tag prediction score0.9536
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026583548.1x
Reference Transcript ID XM_026583548.1
Gene ID NA
Gene Name NA
Transcript ID XM_026583548.1
Protein ID XP_026439333.1
Gene ID LOC113338023
Gene Name NA
Pfam domain motif RPE65
Motif E-value 8.2e-16
Motif start 2
Motif end 60
Protein seq >XP_026439333.1
MVGPNPKFKPVAGYHWYDGDGMVHGLRIKDGKATYVSRYVRTSRLKQEEYFGEAKFIKIGDLEGLFGLLMGRMFHMDGDR
VGFPLTIFYLLVFSFYKEEVCILKKDNYSGQIRPLRLYQNRIDI*
CDS seq >XM_026583548.1
ATGGTCGGTCCAAATCCCAAGTTTAAGCCTGTCGCTGGATATCACTGGTACGATGGAGACGGAATGGTTCATGGTTTGCG
AATTAAAGATGGAAAGGCAACATATGTTTCACGCTACGTAAGGACATCTCGTCTTAAGCAGGAAGAATATTTTGGTGAAG
CGAAATTTATCAAGATTGGAGATCTTGAAGGACTATTTGGATTGTTAATGGGTAGAATGTTTCATATGGATGGGGACAGA
GTAGGTTTTCCATTGACAATTTTCTATTTACTAGTATTTTCCTTTTATAAAGAAGAAGTTTGTATTCTTAAAAAAGACAA
TTACTCCGGACAAATCCGTCCATTGAGGTTATACCAAAACCGCATAGACATATGA
Microexon DNA seq GTACGATGGAGACGG
Microexon Amino Acid seq WYDGDG
Microexon-tag DNA Seq ATGGTCGGTCCAAATCCCAAGTTTAAGCCTGTCGCTGGATATCACTGGTACGATGGAGACGGAATGGTTCATGGTTTGCGAATTAAAGATGGAAAGGCAACATATGTT
Microexon-tag Amino Acid seq MVGPNPKFKPVAGYHWYDGDGMVHGLRIKDGKATYV
Transcript ID XM_026583549.1
Gene ID Ps.77730
Gene Name NA
Pfam domain motif RPE65
Motif E-value 8.4e-16
Motif start 2
Motif end 60
Protein seq >XM_026583549.1
MVGPNPKFKPVAGYHWYDGDGMVHGLRIKDGKATYVSRYVRTSRLKQEEYFGEAKFIKIGDLEGLFGLLMGRMFHMDGDR
VGFPLTIFYLLVFSFYKEEVCILKKDNYSGQIRPLRLYQNRIDI*
CDS seq >XM_026583549.1
ATGGTCGGTCCAAATCCCAAGTTTAAGCCTGTCGCTGGATATCACTGGTACGATGGAGACGGAATGGTTCATGGTTTGCG
AATTAAAGATGGAAAGGCAACATATGTTTCACGCTACGTAAGGACATCTCGTCTTAAGCAGGAAGAATATTTTGGTGAAG
CGAAATTTATCAAGATTGGAGATCTTGAAGGACTATTTGGATTGTTAATGGGTAGAATGTTTCATATGGATGGGGACAGA
GTAGGTTTTCCATTGACAATTTTCTATTTACTAGTATTTTCCTTTTATAAAGAAGAAGTTTGTATTCTTAAAAAAGACAA
TTACTCCGGACAAATCCGTCCATTGAGGTTATACCAAAACCGCATAGACATATGA