
Microexon ID | Ps_NW_020627707.1:6006078-6006092:- |
Species | Papaver somniferum | Coordinates | NW_020627707.1:6006078..6006092 |
Microexon Cluster ID | MEP45 |
Size | 15 |
Phase | 2 |
Pfam Domain Motif | RPE65 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTACGATGGAGACGG |
Microexon Amino Acid seq | WYDGDG |
Microexon-tag DNA Seq | ATGGTCGGTCCAAATCCCAAGTTTAAGCCTGTCGCTGGATATCACTGGTACGATGGAGACGGAATGGTTCATGGTTTGCGAATTAAAGATGGAAAGGCAACATATGTT |
Microexon-tag Amino Acid Seq | MVGPNPKFKPVAGYHWYDGDGMVHGLRIKDGKATYV |
Microexon-tag spanning region | 6005814-6006313 |
Microexon-tag prediction score | 0.9536 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026583548.1x |
Reference Transcript ID | XM_026583548.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026583548.1 |
Protein ID | XP_026439333.1 |
Gene ID | LOC113338023 |
Gene Name | NA |
Pfam domain motif | RPE65 |
Motif E-value | 8.2e-16 |
Motif start | 2 |
Motif end | 60 |
Protein seq | >XP_026439333.1 MVGPNPKFKPVAGYHWYDGDGMVHGLRIKDGKATYVSRYVRTSRLKQEEYFGEAKFIKIGDLEGLFGLLMGRMFHMDGDR VGFPLTIFYLLVFSFYKEEVCILKKDNYSGQIRPLRLYQNRIDI* |
CDS seq | >XM_026583548.1 ATGGTCGGTCCAAATCCCAAGTTTAAGCCTGTCGCTGGATATCACTGGTACGATGGAGACGGAATGGTTCATGGTTTGCG AATTAAAGATGGAAAGGCAACATATGTTTCACGCTACGTAAGGACATCTCGTCTTAAGCAGGAAGAATATTTTGGTGAAG CGAAATTTATCAAGATTGGAGATCTTGAAGGACTATTTGGATTGTTAATGGGTAGAATGTTTCATATGGATGGGGACAGA GTAGGTTTTCCATTGACAATTTTCTATTTACTAGTATTTTCCTTTTATAAAGAAGAAGTTTGTATTCTTAAAAAAGACAA TTACTCCGGACAAATCCGTCCATTGAGGTTATACCAAAACCGCATAGACATATGA |
Microexon DNA seq | GTACGATGGAGACGG |
Microexon Amino Acid seq | WYDGDG |
Microexon-tag DNA Seq | ATGGTCGGTCCAAATCCCAAGTTTAAGCCTGTCGCTGGATATCACTGGTACGATGGAGACGGAATGGTTCATGGTTTGCGAATTAAAGATGGAAAGGCAACATATGTT |
Microexon-tag Amino Acid seq | MVGPNPKFKPVAGYHWYDGDGMVHGLRIKDGKATYV |
Transcript ID | XM_026583549.1 |
Gene ID | Ps.77730 |
Gene Name | NA |
Pfam domain motif | RPE65 |
Motif E-value | 8.4e-16 |
Motif start | 2 |
Motif end | 60 |
Protein seq | >XM_026583549.1 MVGPNPKFKPVAGYHWYDGDGMVHGLRIKDGKATYVSRYVRTSRLKQEEYFGEAKFIKIGDLEGLFGLLMGRMFHMDGDR VGFPLTIFYLLVFSFYKEEVCILKKDNYSGQIRPLRLYQNRIDI* |
CDS seq | >XM_026583549.1 ATGGTCGGTCCAAATCCCAAGTTTAAGCCTGTCGCTGGATATCACTGGTACGATGGAGACGGAATGGTTCATGGTTTGCG AATTAAAGATGGAAAGGCAACATATGTTTCACGCTACGTAAGGACATCTCGTCTTAAGCAGGAAGAATATTTTGGTGAAG CGAAATTTATCAAGATTGGAGATCTTGAAGGACTATTTGGATTGTTAATGGGTAGAATGTTTCATATGGATGGGGACAGA GTAGGTTTTCCATTGACAATTTTCTATTTACTAGTATTTTCCTTTTATAAAGAAGAAGTTTGTATTCTTAAAAAAGACAA TTACTCCGGACAAATCCGTCCATTGAGGTTATACCAAAACCGCATAGACATATGA |