
Microexon ID | Ps_NC_039365.1:9355850-9355864:- |
Species | Papaver somniferum | Coordinates | NC_039365.1:9355850..9355864 |
Microexon Cluster ID | MEP45 |
Size | 15 |
Phase | 2 |
Pfam Domain Motif | RPE65 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTACGACGGAGACGG |
Microexon Amino Acid seq | WYDGDG |
Microexon-tag DNA Seq | ATGATTGGTCCAAATCCTAAGTTTATGCCTGTGGCTGGCTATCACTGGTACGACGGAGACGGAATGGTTCATGGGCTGCGCATTAAAGATGGAAAAGCAACATATGTT |
Microexon-tag Amino Acid Seq | MIGPNPKFMPVAGYHWYDGDGMVHGLRIKDGKATYV |
Microexon-tag spanning region | 9355250-9356468 |
Microexon-tag prediction score | 0.9492 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026554154.1x |
Reference Transcript ID | XM_026554154.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026554154.1 |
Protein ID | XP_026409939.1 |
Gene ID | LOC113305042 |
Gene Name | NA |
Pfam domain motif | RPE65 |
Motif E-value | 4.7e-114 |
Motif start | 15 |
Motif end | 487 |
Protein seq | >XP_026409939.1 MHDSAQPSQYLSGLFEPLSEETPPQTNLIVKGYLPEGLNGELLMIGPNPKFMPVAGYHWYDGDGMVHGLRIKDGKATYVS RYVRTSRLKQEEYFGEAKFLKIGDLEGPFGLFTGSMHFLRSIFKVLDVSYGWGTSNTNLTYHHGELLALGENDKPYVLSI LEDGDLQTVGMLDYGRRLEHPFSAHPKIDSFTGEMFTFGCQLTPPYCTYRVISKDGFMHDSVSITLSEPTMMHDFAITKN FAIFMDLPLKFRPKNLVTREQFLAFDATKKARFGILPRYSTDENNMRWFELPNCFIFHTANAWEDGDQVVLITCRLENTN SMSIAYLIANPFDYKSELYEMRFNMKNGLASQKKLSVSSVEFPRVNDIYIGRKQRFVYTTMIGKRGGIIKFDMHAEPLLE RQNFEVGGNIEGIFNLEPGKFCGDTVFVSREPGVTSEEDDGYLIFFVYDENTGKSVVNLIDAKTMSSDPVAVVELPHVPF GFHSFFATEEQLQAQSFEPEILQG* |
CDS seq | >XM_026554154.1 ATGCATGATTCAGCACAGCCTAGCCAATACTTGTCTGGGCTTTTTGAACCGTTGAGTGAAGAAACCCCGCCTCAAACAAA TCTCATTGTTAAAGGATACCTTCCGGAAGGATTGAACGGAGAGTTGCTAATGATTGGTCCAAATCCTAAGTTTATGCCTG TGGCTGGCTATCACTGGTACGACGGAGACGGAATGGTTCATGGGCTGCGCATTAAAGATGGAAAAGCAACATATGTTTCA CGCTATGTAAGGACATCTCGTCTTAAACAGGAAGAATACTTTGGTGAAGCGAAATTTCTTAAGATTGGAGATCTTGAGGG ACCATTTGGATTGTTCACGGGTAGCATGCATTTTCTTCGATCCATATTTAAAGTATTGGATGTTTCATATGGATGGGGAA CAAGTAATACTAATCTCACATATCACCATGGAGAGCTTTTGGCTCTCGGAGAAAATGATAAGCCTTATGTTCTAAGTATT TTGGAAGACGGAGATTTGCAGACGGTTGGAATGCTAGATTATGGCAGACGATTAGAACATCCCTTTAGTGCACATCCAAA GATTGATTCGTTTACTGGCGAGATGTTTACCTTTGGGTGTCAACTCACACCACCTTATTGTACATATCGGGTCATTTCTA AAGATGGTTTCATGCATGATTCTGTGTCAATTACATTATCAGAGCCTACCATGATGCATGACTTTGCCATTACGAAAAAC TTCGCGATTTTCATGGATTTACCTCTGAAATTTCGACCAAAGAATTTGGTGACACGAGAGCAATTTCTCGCATTCGATGC AACTAAGAAAGCTCGCTTTGGTATTCTTCCTCGATATTCTACCGATGAAAATAATATGAGATGGTTCGAACTTCCTAACT GTTTTATATTCCATACCGCCAATGCATGGGAGGACGGTGACCAAGTAGTTCTGATTACTTGTCGCCTTGAGAATACAAAT TCGATGAGCATCGCCTACTTAATTGCAAACCCGTTCGACTACAAAAGCGAATTGTATGAGATGAGATTCAACATGAAAAA TGGTTTAGCTTCACAGAAAAAACTGTCAGTATCTTCTGTAGAATTTCCCCGGGTTAATGACATTTACATTGGCAGGAAAC AAAGGTTTGTGTATACTACTATGATTGGTAAACGGGGAGGGATCATTAAGTTTGATATGCATGCTGAACCATTATTGGAA AGGCAAAATTTTGAGGTAGGGGGAAATATTGAAGGTATCTTTAACTTGGAACCTGGAAAGTTTTGTGGCGACACCGTATT TGTTTCTCGTGAGCCAGGAGTAACATCTGAAGAAGATGATGGATATTTAATATTCTTCGTATATGATGAGAACACTGGAA AATCTGTAGTGAATCTAATTGATGCCAAAACAATGTCATCCGATCCGGTTGCAGTTGTAGAGCTACCCCACGTTCCCTTC GGATTTCATTCATTCTTTGCAACAGAGGAGCAACTCCAGGCACAAAGTTTTGAACCTGAAATACTCCAGGGATAA |
Ps_NC_039365.1:9355850-9355864:- does not have available information here.