Microexon ID Ps_NC_039365.1:9355850-9355864:-
Species Papaver somniferum
Coordinates NC_039365.1:9355850..9355864
Microexon Cluster ID MEP45
Size 15
Phase 2
Pfam Domain Motif RPE65
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 47,15,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTACGACGGAGACGG
Microexon Amino Acid seq WYDGDG
Microexon-tag DNA Seq ATGATTGGTCCAAATCCTAAGTTTATGCCTGTGGCTGGCTATCACTGGTACGACGGAGACGGAATGGTTCATGGGCTGCGCATTAAAGATGGAAAAGCAACATATGTT
Microexon-tag Amino Acid Seq MIGPNPKFMPVAGYHWYDGDGMVHGLRIKDGKATYV
Microexon-tag spanning region9355250-9356468
Microexon-tag prediction score0.9492
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026554154.1x
Reference Transcript ID XM_026554154.1
Gene ID NA
Gene Name NA
Transcript ID XM_026554154.1
Protein ID XP_026409939.1
Gene ID LOC113305042
Gene Name NA
Pfam domain motif RPE65
Motif E-value 4.7e-114
Motif start 15
Motif end 487
Protein seq >XP_026409939.1
MHDSAQPSQYLSGLFEPLSEETPPQTNLIVKGYLPEGLNGELLMIGPNPKFMPVAGYHWYDGDGMVHGLRIKDGKATYVS
RYVRTSRLKQEEYFGEAKFLKIGDLEGPFGLFTGSMHFLRSIFKVLDVSYGWGTSNTNLTYHHGELLALGENDKPYVLSI
LEDGDLQTVGMLDYGRRLEHPFSAHPKIDSFTGEMFTFGCQLTPPYCTYRVISKDGFMHDSVSITLSEPTMMHDFAITKN
FAIFMDLPLKFRPKNLVTREQFLAFDATKKARFGILPRYSTDENNMRWFELPNCFIFHTANAWEDGDQVVLITCRLENTN
SMSIAYLIANPFDYKSELYEMRFNMKNGLASQKKLSVSSVEFPRVNDIYIGRKQRFVYTTMIGKRGGIIKFDMHAEPLLE
RQNFEVGGNIEGIFNLEPGKFCGDTVFVSREPGVTSEEDDGYLIFFVYDENTGKSVVNLIDAKTMSSDPVAVVELPHVPF
GFHSFFATEEQLQAQSFEPEILQG*
CDS seq >XM_026554154.1
ATGCATGATTCAGCACAGCCTAGCCAATACTTGTCTGGGCTTTTTGAACCGTTGAGTGAAGAAACCCCGCCTCAAACAAA
TCTCATTGTTAAAGGATACCTTCCGGAAGGATTGAACGGAGAGTTGCTAATGATTGGTCCAAATCCTAAGTTTATGCCTG
TGGCTGGCTATCACTGGTACGACGGAGACGGAATGGTTCATGGGCTGCGCATTAAAGATGGAAAAGCAACATATGTTTCA
CGCTATGTAAGGACATCTCGTCTTAAACAGGAAGAATACTTTGGTGAAGCGAAATTTCTTAAGATTGGAGATCTTGAGGG
ACCATTTGGATTGTTCACGGGTAGCATGCATTTTCTTCGATCCATATTTAAAGTATTGGATGTTTCATATGGATGGGGAA
CAAGTAATACTAATCTCACATATCACCATGGAGAGCTTTTGGCTCTCGGAGAAAATGATAAGCCTTATGTTCTAAGTATT
TTGGAAGACGGAGATTTGCAGACGGTTGGAATGCTAGATTATGGCAGACGATTAGAACATCCCTTTAGTGCACATCCAAA
GATTGATTCGTTTACTGGCGAGATGTTTACCTTTGGGTGTCAACTCACACCACCTTATTGTACATATCGGGTCATTTCTA
AAGATGGTTTCATGCATGATTCTGTGTCAATTACATTATCAGAGCCTACCATGATGCATGACTTTGCCATTACGAAAAAC
TTCGCGATTTTCATGGATTTACCTCTGAAATTTCGACCAAAGAATTTGGTGACACGAGAGCAATTTCTCGCATTCGATGC
AACTAAGAAAGCTCGCTTTGGTATTCTTCCTCGATATTCTACCGATGAAAATAATATGAGATGGTTCGAACTTCCTAACT
GTTTTATATTCCATACCGCCAATGCATGGGAGGACGGTGACCAAGTAGTTCTGATTACTTGTCGCCTTGAGAATACAAAT
TCGATGAGCATCGCCTACTTAATTGCAAACCCGTTCGACTACAAAAGCGAATTGTATGAGATGAGATTCAACATGAAAAA
TGGTTTAGCTTCACAGAAAAAACTGTCAGTATCTTCTGTAGAATTTCCCCGGGTTAATGACATTTACATTGGCAGGAAAC
AAAGGTTTGTGTATACTACTATGATTGGTAAACGGGGAGGGATCATTAAGTTTGATATGCATGCTGAACCATTATTGGAA
AGGCAAAATTTTGAGGTAGGGGGAAATATTGAAGGTATCTTTAACTTGGAACCTGGAAAGTTTTGTGGCGACACCGTATT
TGTTTCTCGTGAGCCAGGAGTAACATCTGAAGAAGATGATGGATATTTAATATTCTTCGTATATGATGAGAACACTGGAA
AATCTGTAGTGAATCTAATTGATGCCAAAACAATGTCATCCGATCCGGTTGCAGTTGTAGAGCTACCCCACGTTCCCTTC
GGATTTCATTCATTCTTTGCAACAGAGGAGCAACTCCAGGCACAAAGTTTTGAACCTGAAATACTCCAGGGATAA
Ps_NC_039365.1:9355850-9355864:- does not have available information here.