
Microexon ID | Ps_NC_039365.1:9250729-9250743:- |
Species | Papaver somniferum | Coordinates | NC_039365.1:9250729..9250743 |
Microexon Cluster ID | MEP45 |
Size | 15 |
Phase | 2 |
Pfam Domain Motif | RPE65 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTACGATGGAGACGG |
Microexon Amino Acid seq | WYDGDG |
Microexon-tag DNA Seq | ATGATTGGTCCAAACCCTAAGTTTATGCCCGTAGCTGGCTATCACTGGTACGATGGAGACGGAATGGTTCACGGGCTGCGCGTTAAAGATGGAAAGGCAACATATGTT |
Microexon-tag Amino Acid Seq | MIGPNPKFMPVAGYHWYDGDGMVHGLRVKDGKATYV |
Microexon-tag spanning region | 9249285-9257233 |
Microexon-tag prediction score | 0.9321 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026553383.1x |
Reference Transcript ID | XM_026553383.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026553383.1 |
Protein ID | XP_026409168.1 |
Gene ID | LOC113304308 |
Gene Name | NA |
Pfam domain motif | RPE65 |
Motif E-value | 4.6e-115 |
Motif start | 126 |
Motif end | 598 |
Protein seq | >XP_026409168.1 MSAIDSGFFPGRTSVSNSEKSMFVQTIHQRLHLVFPCNNDRTHKSTKLKMVRCGSSSPARSSQPENHNQQSATAISTDRS REGRILSVDPKPKKGNASKFFDVLEKLIVKLMRDSEQPNQYLSGLFEPLREETPPQPNLFVKGYLPEGLNGELLMIGPNP KFMPVAGYHWYDGDGMVHGLRVKDGKATYVSRYVRTSRLKQEEYFGGAKFLKIGDLDGLFGLFTGSMHFLRSIFKVLDVS YGWGTSNTNLTYHHGELLALGENDKPYVLRILEDGDLQTVGILDYGKRLEHPFTAHPKIDPFTGEMFTFGSQLTPPYCTY RVISKDGFMHDPVPVTLSEPTMMHDFAITENFAIFMDLSMKFRPKNLVTKEQFLAFDATKKARFGVLPRYSTDEHNMRWF ELPNCFIFHNANAWEDGDEVVLITCRLENTDSMSIAYLIANPFDYKSELYEMRFNMKNGLASQKKLSVSSVEFPRVNYNY VGRKQRFVYTTIIGKRGGIVKFDMHAEPSLERKNLEVGGNIKAIFNLEPGKYCGDTVFVSREPGVTSEEDDGYLIFFVYD ENTGKSMVNVIDTKTMSSDPVAVVELPHVPFGFHSFFVTEEQLQAQTKV* |
CDS seq | >XM_026553383.1 ATGTCAGCTATTGATTCAGGGTTCTTCCCTGGACGAACCAGTGTTTCCAACTCAGAAAAATCAATGTTTGTCCAAACGAT CCATCAGCGATTGCATTTAGTATTTCCTTGTAATAATGATCGGACACACAAGAGTACCAAACTGAAAATGGTCCGATGCG GAAGCTCCTCACCTGCTAGATCGTCCCAGCCGGAAAACCATAATCAACAAAGTGCAACTGCAATTAGTACTGACAGGTCA AGAGAAGGAAGAATTTTGTCAGTGGATCCTAAACCTAAGAAAGGAAATGCTTCTAAATTCTTTGATGTTTTAGAGAAGTT GATAGTCAAGCTCATGCGAGATTCAGAACAGCCTAACCAGTACTTGTCTGGCCTTTTTGAACCGTTGCGCGAAGAAACTC CGCCTCAACCAAATCTCTTTGTCAAAGGATACCTTCCGGAAGGATTGAATGGAGAGTTGCTAATGATTGGTCCAAACCCT AAGTTTATGCCCGTAGCTGGCTATCACTGGTACGATGGAGACGGAATGGTTCACGGGCTGCGCGTTAAAGATGGAAAGGC AACATATGTTTCACGTTATGTAAGGACATCTCGTCTAAAGCAGGAAGAATACTTTGGTGGAGCAAAATTCCTTAAGATTG GAGATCTTGATGGATTATTTGGATTGTTCACCGGTAGCATGCATTTTCTTCGATCCATATTTAAAGTATTGGATGTTTCA TATGGATGGGGAACAAGTAATACTAATCTCACATATCACCATGGAGAACTTTTGGCTCTTGGAGAAAATGATAAGCCTTA TGTTCTAAGAATTTTGGAAGATGGAGATCTGCAAACTGTTGGAATACTAGATTATGGCAAACGATTAGAGCATCCTTTTA CTGCACATCCAAAGATCGATCCATTTACTGGTGAGATGTTTACTTTTGGGAGTCAGCTAACACCCCCTTATTGTACATAT CGGGTCATTTCTAAAGATGGTTTCATGCATGATCCCGTGCCAGTCACATTATCAGAACCTACCATGATGCATGACTTTGC TATTACAGAAAACTTTGCGATTTTCATGGATTTGTCTATGAAATTTCGACCGAAGAATTTGGTGACAAAAGAGCAATTTC TTGCATTTGATGCAACAAAGAAAGCTCGTTTTGGTGTTCTTCCTCGATATTCAACGGATGAGCATAATATGAGATGGTTC GAACTTCCAAACTGTTTTATATTTCACAACGCCAATGCATGGGAGGATGGTGACGAAGTAGTTTTGATAACTTGTCGCCT TGAGAATACTGATTCGATGAGCATTGCCTACTTAATTGCAAACCCGTTCGACTACAAAAGTGAACTGTACGAGATGAGAT TCAACATGAAAAATGGTTTAGCATCACAGAAAAAACTGTCAGTATCTTCTGTAGAATTTCCACGGGTTAATTACAATTAT GTCGGCAGGAAACAAAGGTTTGTGTATACTACTATTATTGGTAAACGGGGAGGAATTGTTAAATTTGATATGCATGCGGA ACCATCGTTGGAAAGGAAAAATCTTGAGGTAGGAGGAAATATTAAAGCTATCTTTAACTTGGAACCTGGAAAGTATTGCG GCGACACTGTTTTTGTTTCCCGTGAGCCAGGAGTAACATCTGAAGAAGATGATGGATACTTAATATTCTTCGTATATGAT GAGAACACTGGAAAATCTATGGTGAATGTAATTGATACCAAAACAATGTCATCTGATCCGGTTGCAGTTGTTGAGCTACC CCACGTTCCCTTTGGATTTCATTCTTTCTTTGTGACAGAGGAGCAACTCCAAGCACAAACAAAGGTCTGA |
Microexon DNA seq | GTACGATGGAGACGG |
Microexon Amino Acid seq | WYDGDG |
Microexon-tag DNA Seq | ATGATTGGTCCAAACCCTAAGTTTATGCCCGTAGCTGGCTATCACTGGTACGATGGAGACGGAATGGTTCACGGGCTGCGCGTTAAAGATGGAAAGGCAACATATGTT |
Microexon-tag Amino Acid seq | MIGPNPKFMPVAGYHWYDGDGMVHGLRVKDGKATYV |
Transcript ID | XM_026553383.1 |
Gene ID | Ps.47894 |
Gene Name | NA |
Pfam domain motif | RPE65 |
Motif E-value | 4.6e-115 |
Motif start | 126 |
Motif end | 598 |
Protein seq | >XM_026553383.1 MSAIDSGFFPGRTSVSNSEKSMFVQTIHQRLHLVFPCNNDRTHKSTKLKMVRCGSSSPARSSQPENHNQQSATAISTDRS REGRILSVDPKPKKGNASKFFDVLEKLIVKLMRDSEQPNQYLSGLFEPLREETPPQPNLFVKGYLPEGLNGELLMIGPNP KFMPVAGYHWYDGDGMVHGLRVKDGKATYVSRYVRTSRLKQEEYFGGAKFLKIGDLDGLFGLFTGSMHFLRSIFKVLDVS YGWGTSNTNLTYHHGELLALGENDKPYVLRILEDGDLQTVGILDYGKRLEHPFTAHPKIDPFTGEMFTFGSQLTPPYCTY RVISKDGFMHDPVPVTLSEPTMMHDFAITENFAIFMDLSMKFRPKNLVTKEQFLAFDATKKARFGVLPRYSTDEHNMRWF ELPNCFIFHNANAWEDGDEVVLITCRLENTDSMSIAYLIANPFDYKSELYEMRFNMKNGLASQKKLSVSSVEFPRVNYNY VGRKQRFVYTTIIGKRGGIVKFDMHAEPSLERKNLEVGGNIKAIFNLEPGKYCGDTVFVSREPGVTSEEDDGYLIFFVYD ENTGKSMVNVIDTKTMSSDPVAVVELPHVPFGFHSFFVTEEQLQAQTKV* |
CDS seq | >XM_026553383.1 ATGTCAGCTATTGATTCAGGGTTCTTCCCTGGACGAACCAGTGTTTCCAACTCAGAAAAATCAATGTTTGTCCAAACGAT CCATCAGCGATTGCATTTAGTATTTCCTTGTAATAATGATCGGACACACAAGAGTACCAAACTGAAAATGGTCCGATGCG GAAGCTCCTCACCTGCTAGATCGTCCCAGCCGGAAAACCATAATCAACAAAGTGCAACTGCAATTAGTACTGACAGGTCA AGAGAAGGAAGAATTTTGTCAGTGGATCCTAAACCTAAGAAAGGAAATGCTTCTAAATTCTTTGATGTTTTAGAGAAGTT GATAGTCAAGCTCATGCGAGATTCAGAACAGCCTAACCAGTACTTGTCTGGCCTTTTTGAACCGTTGCGCGAAGAAACTC CGCCTCAACCAAATCTCTTTGTCAAAGGATACCTTCCGGAAGGATTGAATGGAGAGTTGCTAATGATTGGTCCAAACCCT AAGTTTATGCCCGTAGCTGGCTATCACTGGTACGATGGAGACGGAATGGTTCACGGGCTGCGCGTTAAAGATGGAAAGGC AACATATGTTTCACGTTATGTAAGGACATCTCGTCTAAAGCAGGAAGAATACTTTGGTGGAGCAAAATTCCTTAAGATTG GAGATCTTGATGGATTATTTGGATTGTTCACCGGTAGCATGCATTTTCTTCGATCCATATTTAAAGTATTGGATGTTTCA TATGGATGGGGAACAAGTAATACTAATCTCACATATCACCATGGAGAACTTTTGGCTCTTGGAGAAAATGATAAGCCTTA TGTTCTAAGAATTTTGGAAGATGGAGATCTGCAAACTGTTGGAATACTAGATTATGGCAAACGATTAGAGCATCCTTTTA CTGCACATCCAAAGATCGATCCATTTACTGGTGAGATGTTTACTTTTGGGAGTCAGCTAACACCCCCTTATTGTACATAT CGGGTCATTTCTAAAGATGGTTTCATGCATGATCCCGTGCCAGTCACATTATCAGAACCTACCATGATGCATGACTTTGC TATTACAGAAAACTTTGCGATTTTCATGGATTTGTCTATGAAATTTCGACCGAAGAATTTGGTGACAAAAGAGCAATTTC TTGCATTTGATGCAACAAAGAAAGCTCGTTTTGGTGTTCTTCCTCGATATTCAACGGATGAGCATAATATGAGATGGTTC GAACTTCCAAACTGTTTTATATTTCACAACGCCAATGCATGGGAGGATGGTGACGAAGTAGTTTTGATAACTTGTCGCCT TGAGAATACTGATTCGATGAGCATTGCCTACTTAATTGCAAACCCGTTCGACTACAAAAGTGAACTGTACGAGATGAGAT TCAACATGAAAAATGGTTTAGCATCACAGAAAAAACTGTCAGTATCTTCTGTAGAATTTCCACGGGTTAATTACAATTAT GTCGGCAGGAAACAAAGGTTTGTGTATACTACTATTATTGGTAAACGGGGAGGAATTGTTAAATTTGATATGCATGCGGA ACCATCGTTGGAAAGGAAAAATCTTGAGGTAGGAGGAAATATTAAAGCTATCTTTAACTTGGAACCTGGAAAGTATTGCG GCGACACTGTTTTTGTTTCCCGTGAGCCAGGAGTAACATCTGAAGAAGATGATGGATACTTAATATTCTTCGTATATGAT GAGAACACTGGAAAATCTATGGTGAATGTAATTGATACCAAAACAATGTCATCTGATCCGGTTGCAGTTGTTGAGCTACC CCACGTTCCCTTTGGATTTCATTCTTTCTTTGTGACAGAGGAGCAACTCCAAGCACAAACAAAGGTCTGA |