
Microexon ID | Ps_NC_039365.1:171913810-171913824:+ |
Species | Papaver somniferum | Coordinates | NC_039365.1:171913810..171913824 |
Microexon Cluster ID | MEP45 |
Size | 15 |
Phase | 2 |
Pfam Domain Motif | RPE65 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTCGATGGAGATGG |
Microexon Amino Acid seq | WFDGDG |
Microexon-tag DNA Seq | ATGGTTGGTCCAAATCCTAATTTTATGCCTGTTGCTGGATATCACTGGTTCGATGGAGATGGAATGGTTCATGGTTTGCATATTAAAGATGGAAAAGCAACATATGTT |
Microexon-tag Amino Acid Seq | MVGPNPNFMPVAGYHWFDGDGMVHGLHIKDGKATYV |
Microexon-tag spanning region | 171912360-171914272 |
Microexon-tag prediction score | 0.9547 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026553072.1x |
Reference Transcript ID | XM_026553072.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026553072.1 |
Protein ID | XP_026408857.1 |
Gene ID | LOC113303982 |
Gene Name | NA |
Pfam domain motif | RPE65 |
Motif E-value | 7.4e-25 |
Motif start | 118 |
Motif end | 205 |
Protein seq | >XP_026408857.1 MYLAINSGIFSGILSAANSENSMTHQRLAVLLFPCNNRTGKSTKLKMVRCGRSSPARSSHSANHNQQSTGGSRDGRVLLV DPKPMKGVASQFFDVVEKLVVKHLHGSKQPNQYLSGLFAPVDEETPPQPNLPVKGYLPEGLNGELLMVGPNPNFMPVAGY HWFDGDGMVHGLHIKDGKATYVSRYVRTSRLKQEEHFGGAKFVKIGHLHGLFGLCMASIHFLRSIFKVLDFYYG* |
CDS seq | >XM_026553072.1 ATGTATTTAGCGATTAATTCAGGGATCTTCTCTGGAATACTGAGTGCCGCGAACTCAGAAAATTCAATGACCCATCAGCG GTTGGCGGTTTTATTGTTTCCTTGTAATAACCGGACAGGCAAGAGTACCAAACTGAAAATGGTCCGATGCGGAAGATCCT CACCTGCTAGATCATCCCATTCGGCAAACCACAATCAACAAAGTACTGGCGGGTCAAGAGATGGAAGAGTTTTGTTGGTG GATCCCAAGCCTATGAAAGGAGTTGCTTCTCAATTCTTTGATGTCGTTGAGAAGTTGGTAGTTAAGCACTTGCATGGTTC AAAACAGCCTAACCAGTATTTGTCTGGACTTTTCGCACCGGTGGACGAAGAAACTCCCCCTCAACCAAATCTCCCTGTCA AAGGGTACCTTCCGGAAGGATTGAATGGAGAGTTGCTAATGGTTGGTCCAAATCCTAATTTTATGCCTGTTGCTGGATAT CACTGGTTCGATGGAGATGGAATGGTTCATGGTTTGCATATTAAAGATGGAAAAGCAACATATGTTTCCCGCTATGTAAG GACATCTCGTCTTAAACAGGAAGAACATTTTGGTGGAGCTAAATTTGTCAAGATCGGACATCTTCATGGACTATTTGGAT TGTGCATGGCCAGCATTCATTTTCTTCGATCGATATTTAAAGTATTGGATTTTTACTATGGATGA |
Microexon DNA seq | GTTCGATGGAGATGG |
Microexon Amino Acid seq | WFDGDG |
Microexon-tag DNA Seq | ATGGTTGGTCCAAATCCTAATTTTATGCCTGTTGCTGGATATCACTGGTTCGATGGAGATGGAATGGTTCATGGTTTGCATATTAAAGATGGAAAAGCAACATATGTT |
Microexon-tag Amino Acid seq | MVGPNPNFMPVAGYHWFDGDGMVHGLHIKDGKATYV |
Transcript ID | Ps.52775.1 |
Gene ID | Ps.52775 |
Gene Name | NA |
Pfam domain motif | RPE65 |
Motif E-value | 7.5e-25 |
Motif start | 118 |
Motif end | 205 |
Protein seq | >Ps.52775.1 MYLAINSGIFSGILSAANSENSMTHQRLAVLLFPCNNRTGKSTKLKMVRCGRSSPARSSHSANHNQQSTGGSRDGRVLLV DPKPMKGVASQFFDVVEKLVVKHLHGSKQPNQYLSGLFAPVDEETPPQPNLPVKGYLPEGLNGELLMVGPNPNFMPVAGY HWFDGDGMVHGLHIKDGKATYVSRYVRTSRLKQEEHFGGAKFVKIGHLHGLFGLCMASIHFLRSIFKVLDFYYG* |
CDS seq | >Ps.52775.1 ATGTATTTAGCGATTAATTCAGGGATCTTCTCTGGAATACTGAGTGCCGCGAACTCAGAAAATTCAATGACCCATCAGCG GTTGGCGGTTTTATTGTTTCCTTGTAATAACCGGACAGGCAAGAGTACCAAACTGAAAATGGTCCGATGCGGAAGATCCT CACCTGCTAGATCATCCCATTCGGCAAACCACAATCAACAAAGTACTGGCGGGTCAAGAGATGGAAGAGTTTTGTTGGTG GATCCCAAGCCTATGAAAGGAGTTGCTTCTCAATTCTTTGATGTCGTTGAGAAGTTGGTAGTTAAGCACTTGCATGGTTC AAAACAGCCTAACCAGTATTTGTCTGGACTTTTCGCACCGGTGGACGAAGAAACTCCCCCTCAACCAAATCTCCCTGTCA AAGGGTACCTTCCGGAAGGATTGAATGGAGAGTTGCTAATGGTTGGTCCAAATCCTAATTTTATGCCTGTTGCTGGATAT CACTGGTTCGATGGAGATGGAATGGTTCATGGTTTGCATATTAAAGATGGAAAAGCAACATATGTTTCCCGCTATGTAAG GACATCTCGTCTTAAACAGGAAGAACATTTTGGTGGAGCTAAATTTGTCAAGATCGGACATCTTCATGGACTATTTGGAT TGTGCATGGCCAGCATTCATTTTCTTCGATCGATATTTAAAGTATTGGATTTTTACTATGGATGA |