
Microexon ID | Ps_NC_039358.1:180412151-180412165:- |
Species | Papaver somniferum | Coordinates | NC_039358.1:180412151..180412165 |
Microexon Cluster ID | MEP45 |
Size | 15 |
Phase | 2 |
Pfam Domain Motif | RPE65 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTGATGGAGATGG |
Microexon Amino Acid seq | WFDGDG |
Microexon-tag DNA Seq | AGGGTCGGTCCTAATCCTAAGTTTATGCCTGTCGCTGGATATCACTGGTTTGATGGAGATGGAATGGTTCATGGTATGCGTATTAAAGATGGAAAAGCAACATACGTT |
Microexon-tag Amino Acid Seq | RVGPNPKFMPVAGYHWFDGDGMVHGMRIKDGKATYV |
Microexon-tag spanning region | 180411866-180412318 |
Microexon-tag prediction score | 0.9756 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026557523.1x |
Reference Transcript ID | XM_026557523.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026557523.1 |
Protein ID | XP_026413308.1 |
Gene ID | LOC113309092 |
Gene Name | NA |
Pfam domain motif | RPE65 |
Motif E-value | 1.1e-127 |
Motif start | 59 |
Motif end | 537 |
Protein seq | >XP_026413308.1 MAETKEQLSTRRSIDGGILLVDPKPNKGIASKFVDVVEKLIVKLMYDSKQTHHYLTGNFAPVLEETPPCQNLPVKGYLPE CLNGEFVRVGPNPKFMPVAGYHWFDGDGMVHGMRIKDGKATYVSRYVRTSRLKQEEHFKGAKFMKIGDLKGLFGLFMVNM QLLRAKFKVLDVSYGTGTGNTALIYHHGKLLALSEADKPYVLKVLEDGDLQTLGMLDYDKRLAHSFTAHPKVDPFTGEMF TFGYSHAPPYCTYRVISKDGFMHDPVPITIADPVMMHDFAITENYAVFMDLPLYFRPKDMVKEKKLIFTFDATKKARFGV LPRYATNELHIRWFELPNCFIFHNANAWEEGDEVVLITCRLQNPDLDMVSGTVKEKLENFTNELYEMRFNMESGLASQKK LSVSAVDFPRVNESYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDLGKKELEVGGNIKGIFDLGPGRFGSEAIFVPRE PGVTSEEDDGYLIFFAHDETTGKSAVNVIDAKTMSADPVAVVDLPNRVPYGFHAFFVTEEQLREQANI* |
CDS seq | >XM_026557523.1 ATGGCAGAGACGAAAGAGCAGTTGAGTACAAGAAGAAGTATTGATGGAGGAATTTTATTGGTGGATCCTAAGCCAAACAA AGGGATTGCTTCTAAATTCGTCGATGTTGTCGAGAAGTTGATAGTGAAGCTCATGTACGATTCTAAACAGACTCATCACT ACTTAACTGGGAATTTCGCTCCAGTACTTGAAGAGACTCCTCCTTGTCAGAATCTCCCTGTCAAAGGATACCTCCCTGAA TGCTTGAATGGAGAATTTGTTAGGGTCGGTCCTAATCCTAAGTTTATGCCTGTCGCTGGATATCACTGGTTTGATGGAGA TGGAATGGTTCATGGTATGCGTATTAAAGATGGAAAAGCAACATACGTTTCACGCTATGTAAGGACTTCTCGTCTAAAAC AGGAAGAGCATTTTAAAGGAGCAAAATTCATGAAGATTGGAGACCTTAAAGGACTGTTTGGTTTATTTATGGTTAACATG CAATTACTTCGAGCAAAATTCAAAGTATTGGATGTTTCATATGGAACTGGAACAGGTAATACTGCTCTAATATATCACCA CGGAAAACTATTGGCCCTCTCAGAAGCAGATAAACCCTATGTGCTTAAAGTTTTGGAAGACGGAGATCTGCAGACGCTTG GGATGCTCGATTACGACAAGAGATTGGCACATTCCTTTACCGCTCACCCAAAGGTCGACCCATTTACTGGCGAGATGTTT ACCTTTGGGTACTCACACGCACCACCTTATTGTACATACCGAGTCATATCTAAGGATGGTTTCATGCATGATCCTGTACC AATCACCATAGCAGATCCTGTCATGATGCATGACTTTGCCATCACAGAAAATTATGCAGTTTTTATGGATCTGCCTTTGT ACTTCCGGCCAAAGGACATGGTGAAGGAAAAGAAGCTAATTTTCACATTTGACGCAACAAAGAAAGCTCGGTTTGGTGTT CTTCCTCGATATGCAACGAATGAGCTTCATATCAGATGGTTCGAACTTCCAAACTGTTTCATATTCCACAATGCCAATGC TTGGGAGGAAGGTGATGAAGTAGTTTTGATCACTTGCCGCCTTCAGAATCCAGATTTGGATATGGTCAGTGGAACTGTGA AAGAGAAGCTTGAAAATTTCACTAATGAGCTGTACGAGATGAGATTCAACATGGAAAGTGGTTTAGCTTCCCAGAAGAAA CTGTCAGTATCTGCTGTAGATTTTCCACGGGTTAATGAGAGTTACACTGGCAGGAAACAAAGATACGTTTATGGAACTAT ACTGGACAGCATTGCTAAAGTGACAGGAATTATCAAATTTGATCTCCATGCTGAACCAGATCTTGGGAAAAAAGAACTTG AGGTTGGAGGAAATATCAAAGGGATCTTTGACTTGGGACCTGGAAGATTTGGTTCAGAGGCTATTTTTGTCCCCCGTGAG CCTGGTGTAACTTCTGAAGAAGATGATGGATACTTAATATTCTTTGCACATGATGAGACTACTGGAAAATCTGCAGTGAA TGTAATTGATGCGAAAACCATGTCAGCTGATCCTGTAGCAGTTGTTGACCTACCTAATCGTGTTCCATATGGATTCCATG CTTTCTTTGTAACAGAGGAGCAACTCCGTGAACAAGCAAACATTTGA |
Microexon DNA seq | GTTTGATGGAGATGG |
Microexon Amino Acid seq | WFDGDG |
Microexon-tag DNA Seq | AGGGTCGGTCCTAATCCTAAGTTTATGCCTGTCGCTGGATATCACTGGTTTGATGGAGATGGAATGGTTCATGGTATGCGTATTAAAGATGGAAAAGCAACATACGTT |
Microexon-tag Amino Acid seq | RVGPNPKFMPVAGYHWFDGDGMVHGMRIKDGKATYV |
Transcript ID | XM_026557523.1 |
Gene ID | Ps.5423 |
Gene Name | NA |
Pfam domain motif | RPE65 |
Motif E-value | 1.1e-127 |
Motif start | 59 |
Motif end | 537 |
Protein seq | >XM_026557523.1 MAETKEQLSTRRSIDGGILLVDPKPNKGIASKFVDVVEKLIVKLMYDSKQTHHYLTGNFAPVLEETPPCQNLPVKGYLPE CLNGEFVRVGPNPKFMPVAGYHWFDGDGMVHGMRIKDGKATYVSRYVRTSRLKQEEHFKGAKFMKIGDLKGLFGLFMVNM QLLRAKFKVLDVSYGTGTGNTALIYHHGKLLALSEADKPYVLKVLEDGDLQTLGMLDYDKRLAHSFTAHPKVDPFTGEMF TFGYSHAPPYCTYRVISKDGFMHDPVPITIADPVMMHDFAITENYAVFMDLPLYFRPKDMVKEKKLIFTFDATKKARFGV LPRYATNELHIRWFELPNCFIFHNANAWEEGDEVVLITCRLQNPDLDMVSGTVKEKLENFTNELYEMRFNMESGLASQKK LSVSAVDFPRVNESYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDLGKKELEVGGNIKGIFDLGPGRFGSEAIFVPRE PGVTSEEDDGYLIFFAHDETTGKSAVNVIDAKTMSADPVAVVDLPNRVPYGFHAFFVTEEQLREQANI* |
CDS seq | >XM_026557523.1 ATGGCAGAGACGAAAGAGCAGTTGAGTACAAGAAGAAGTATTGATGGAGGAATTTTATTGGTGGATCCTAAGCCAAACAA AGGGATTGCTTCTAAATTCGTCGATGTTGTCGAGAAGTTGATAGTGAAGCTCATGTACGATTCTAAACAGACTCATCACT ACTTAACTGGGAATTTCGCTCCAGTACTTGAAGAGACTCCTCCTTGTCAGAATCTCCCTGTCAAAGGATACCTCCCTGAA TGCTTGAATGGAGAATTTGTTAGGGTCGGTCCTAATCCTAAGTTTATGCCTGTCGCTGGATATCACTGGTTTGATGGAGA TGGAATGGTTCATGGTATGCGTATTAAAGATGGAAAAGCAACATACGTTTCACGCTATGTAAGGACTTCTCGTCTAAAAC AGGAAGAGCATTTTAAAGGAGCAAAATTCATGAAGATTGGAGACCTTAAAGGACTGTTTGGTTTATTTATGGTTAACATG CAATTACTTCGAGCAAAATTCAAAGTATTGGATGTTTCATATGGAACTGGAACAGGTAATACTGCTCTAATATATCACCA CGGAAAACTATTGGCCCTCTCAGAAGCAGATAAACCCTATGTGCTTAAAGTTTTGGAAGACGGAGATCTGCAGACGCTTG GGATGCTCGATTACGACAAGAGATTGGCACATTCCTTTACCGCTCACCCAAAGGTCGACCCATTTACTGGCGAGATGTTT ACCTTTGGGTACTCACACGCACCACCTTATTGTACATACCGAGTCATATCTAAGGATGGTTTCATGCATGATCCTGTACC AATCACCATAGCAGATCCTGTCATGATGCATGACTTTGCCATCACAGAAAATTATGCAGTTTTTATGGATCTGCCTTTGT ACTTCCGGCCAAAGGACATGGTGAAGGAAAAGAAGCTAATTTTCACATTTGACGCAACAAAGAAAGCTCGGTTTGGTGTT CTTCCTCGATATGCAACGAATGAGCTTCATATCAGATGGTTCGAACTTCCAAACTGTTTCATATTCCACAATGCCAATGC TTGGGAGGAAGGTGATGAAGTAGTTTTGATCACTTGCCGCCTTCAGAATCCAGATTTGGATATGGTCAGTGGAACTGTGA AAGAGAAGCTTGAAAATTTCACTAATGAGCTGTACGAGATGAGATTCAACATGGAAAGTGGTTTAGCTTCCCAGAAGAAA CTGTCAGTATCTGCTGTAGATTTTCCACGGGTTAATGAGAGTTACACTGGCAGGAAACAAAGATACGTTTATGGAACTAT ACTGGACAGCATTGCTAAAGTGACAGGAATTATCAAATTTGATCTCCATGCTGAACCAGATCTTGGGAAAAAAGAACTTG AGGTTGGAGGAAATATCAAAGGGATCTTTGACTTGGGACCTGGAAGATTTGGTTCAGAGGCTATTTTTGTCCCCCGTGAG CCTGGTGTAACTTCTGAAGAAGATGATGGATACTTAATATTCTTTGCACATGATGAGACTACTGGAAAATCTGCAGTGAA TGTAATTGATGCGAAAACCATGTCAGCTGATCCTGTAGCAGTTGTTGACCTACCTAATCGTGTTCCATATGGATTCCATG CTTTCTTTGTAACAGAGGAGCAACTCCGTGAACAAGCAAACATTTGA |