| Microexon ID | Bn_scaffoldA04:17457-17471:- |
| Species | Brassica Napus | Coordinates | scaffoldA04:17457..17471 |
| Microexon Cluster ID | MEP45 |
| Size | 15 |
| Phase | 2 |
| Pfam Domain Motif | RPE65 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,15,46 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | AGRGTTGGKCCTAAYCCMAAGTTTGYYCCWGTKGCTGGATAYCAYTGGTTTGATGGAGATGGMATGATTCATGSYWTGCGYATYAAAGATGGAAAAGCWACWTATGTY |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GTTTGATGGAGATGG |
| Microexon Amino Acid seq | WFDGDG |
| Microexon-tag DNA Seq | AGGGTTGGTCCAAATCCCAAGTTTGATCCCGTCGCTGGATATCACTGGTTTGATGGAGATGGGATGATACATGCTGTACGCATCAAAGATGGGAAAGCAACTTATGTT |
| Microexon-tag Amino Acid Seq | RVGPNPKFDPVAGYHWFDGDGMIHAVRIKDGKATYV |
| Microexon-tag spanning region | 17292-17613 |
| Microexon-tag prediction score | 0.9754 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA04T0000400ZSx |
| Reference Transcript ID | BnaA04T0000400ZS |
| Gene ID | BnaA04G0000400ZS |
| Gene Name | NA |
| Transcript ID | BnaA04T0000400ZS |
| Protein ID | |
| Gene ID | BnaA04G0000400ZS |
| Gene Name | |
| Pfam domain motif | RPE65 |
| Motif E-value | 9.20E-145 |
| Motif start | 47 |
| Motif end | 523 |
| Protein seq | >BnaA04T0000400ZS MAENCIVSVNPKPSKGLSSKLLDLVERVVVKLMHDASLPLHYLSGNFAPVRDETPPVKDLPVVHGFLPECLNGEFVRVGP NPKFDPVAGYHWFDGDGMIHAVRIKDGKATYVSRYVKTSRLKQEEFFGAPKFMKIGDLKGLLGLLMVYLQQLRTKLKVLD VSYGHGTANTALVYHHGKLLALSEADKPYVVKVLEDGDLQTLGMMDYDKRLTHSFTAHPKVDPTTGEMFTFGYSQTPPYL TYRVISEDGFMHDPVPITISEPIMMHDFAITETYAIFMDLPMHFRPKEMVKEKKMVYSFDPTKKARFGVLPRYAKDELMI RWFELPNCFIFHNANAWEEEDEVVLITCRLENPDLDMVGGDAKEKLENFSNELYEMRFNMKTGSASQKKLSPSAVDFPRI NECYTGKKQRYVYGTILDSIAKVTGIIKFDLHAEAETGKEILEVGGNIKGIYELGQGRYGSEAIYVPREAGEEDDGYLIF FVHDENTGKSCVNVIDAKTMSAEPVAVVELPHRVPYGFHAFFVTEEQLQEQTLT* |
| CDS seq | >BnaA04T0000400ZS ATGGCGGAGAACTGCATAGTTTCGGTCAACCCTAAACCCTCAAAGGGATTATCCTCTAAGCTTCTCGATCTTGTGGAGAG AGTTGTTGTGAAGCTCATGCACGATGCTTCTCTGCCTCTCCACTACCTCTCCGGCAACTTCGCTCCCGTGCGGGATGAAA CTCCTCCGGTGAAGGATCTCCCCGTCGTCCATGGATTTCTTCCAGAGTGCTTGAATGGTGAATTTGTGAGGGTTGGTCCA AATCCCAAGTTTGATCCCGTCGCTGGATATCACTGGTTTGATGGAGATGGGATGATACATGCTGTACGCATCAAAGATGG GAAAGCAACTTATGTTTCTCGTTATGTTAAGACATCACGCCTCAAGCAGGAAGAGTTTTTCGGAGCTCCCAAATTCATGA AGATTGGGGACCTTAAGGGTCTTTTGGGATTGCTTATGGTCTATCTCCAACAGCTCAGAACCAAACTGAAAGTTTTGGAC GTCTCTTATGGACATGGAACTGCTAATACAGCCCTCGTCTATCACCATGGAAAACTTCTAGCTCTCTCGGAGGCAGATAA GCCATATGTCGTCAAAGTCTTGGAAGATGGAGACCTTCAAACTCTTGGCATGATGGATTATGACAAGAGATTGACCCACT CCTTCACTGCACACCCTAAAGTTGACCCAACTACCGGTGAAATGTTTACATTTGGCTATTCGCAAACGCCACCTTATCTC ACCTACAGAGTGATCTCGGAAGACGGCTTTATGCATGACCCTGTCCCAATTACTATATCTGAGCCAATCATGATGCACGA TTTTGCTATTACTGAGACTTACGCAATCTTCATGGATCTTCCTATGCACTTCAGGCCAAAGGAAATGGTGAAAGAGAAGA AAATGGTATACTCATTTGATCCAACAAAAAAGGCTCGTTTTGGTGTTCTTCCACGCTATGCCAAGGATGAACTCATGATT AGATGGTTTGAGCTTCCCAACTGCTTTATATTCCATAACGCCAATGCTTGGGAAGAAGAGGATGAAGTCGTCCTCATCAC TTGTCGCCTTGAGAATCCAGATCTTGACATGGTCGGCGGGGATGCGAAAGAAAAACTTGAGAACTTTAGCAACGAACTGT ACGAAATGAGATTTAACATGAAAACGGGCTCAGCTTCTCAGAAAAAACTATCGCCATCTGCAGTTGATTTCCCCAGAATC AACGAGTGCTACACTGGAAAGAAACAGCGATATGTATATGGAACAATCCTGGACAGTATCGCCAAGGTTACAGGAATTAT CAAGTTTGATCTGCATGCGGAAGCTGAGACAGGGAAAGAAATACTGGAAGTAGGAGGCAATATCAAAGGAATCTATGAGC TGGGTCAAGGCAGATACGGTTCAGAGGCTATATATGTCCCTCGTGAGGCAGGGGAAGAAGATGATGGTTACTTGATATTC TTTGTTCATGATGAAAACACAGGGAAATCATGTGTGAATGTGATTGACGCAAAAACAATGTCTGCTGAGCCAGTGGCAGT GGTGGAGCTGCCGCATAGGGTTCCATATGGCTTCCATGCCTTCTTTGTTACAGAGGAACAACTCCAGGAACAAACTCTTA CATAA |
Bn_scaffoldA04:17457-17471:- does not have available information here.