
Microexon ID | Zm_1:84229758-84229772:- |
Species | Zea mays | Coordinates | 1:84229758..84229772 |
Microexon Cluster ID | MEP44 |
Size | 15 |
Phase | 1 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,15,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATTTTGGACAGCAAG |
Microexon Amino Acid seq | DFGQQG |
Microexon-tag DNA Seq | ATTTATGGGCTTTGCGACATTGATTTGAAAGATTTCAGCTTGCAAGATTTTGGACAGCAAGGCTGTCTACTTCGGAGCTTACCTACAGATATTGTGTTTGACAACGCT |
Microexon-tag Amino Acid Seq | IYGLCDIDLKDFSLQDFGQQGCLLRSLPTDIVFDNA |
Microexon-tag spanning region | 84229627-84229917 |
Microexon-tag prediction score | 0.9729 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d029726_T001x |
Reference Transcript ID | Zm00001d029726_T001 |
Gene ID | Zm00001d029726 |
Gene Name | NA |
Transcript ID | Zm00001d029726_T001 |
Protein ID | Zm00001d029726_P001 |
Gene ID | Zm00001d029726 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d029726_P001 MDRSSSGSCGQGTVHHWLVLIVVWLCGSQHVVSQKSTLEPKDKFLLSDPPIGLFDPIEISPSVLPHNTNPVEPLSPMYPN YTSYDPVLTGKCHVNFSALSYIMEKTAYDCSIPLAPLVADVICCPQVNSLMNIFQAAYGSGNGTLVLNQASANACFSDIM NILASKGANTNIPELCTLRPSNLTDVSCPVKDISSFEKIVNISKLQDACSNVDPLKECCRPVCQPAIAEAAIHISSGGAN MFGSSSMPGSAVGIDVVSDCKGVVHSWLSMKLSSEEANSAFRVLSGCKVNKVCPLEFDEPSSVVKACGKASSSTLSCCAA LHSYIGTRQKQIFVTNLQAINCATMFGSMLQKAGVVDDIYGLCDIDLKDFSLQDFGQQGCLLRSLPTDIVFDNATGISFT CDLSDNIAAPWPSSSSVQSLSLCAPEMSLPALPVSPKSESSGPSRTGIGVLLLLVFLTTITI* |
CDS seq | >Zm00001d029726_T001 ATGGACAGATCCAGTTCTGGTTCTTGTGGTCAGGGTACAGTGCATCACTGGCTTGTGCTGATTGTGGTTTGGCTTTGTGG AAGCCAGCATGTTGTGTCTCAGAAATCGACACTTGAACCAAAAGATAAATTCCTTCTGTCTGATCCACCAATTGGCCTCT TTGATCCAATAGAGATTTCACCTTCTGTTCTTCCACACAATACTAACCCTGTTGAGCCACTGTCACCTATGTATCCAAAT TACACATCCTATGATCCAGTCTTGACTGGAAAATGCCATGTAAATTTTTCTGCACTCTCTTATATCATGGAGAAGACAGC GTATGATTGCTCCATTCCGTTAGCACCACTAGTTGCTGATGTTATATGTTGCCCCCAAGTTAATAGCTTGATGAATATTT TCCAAGCTGCATATGGCAGTGGAAATGGTACCCTAGTTCTCAACCAGGCTTCAGCAAATGCTTGTTTCTCTGACATTATG AACATCCTTGCAAGCAAAGGGGCAAACACCAACATCCCTGAGTTATGTACTCTGAGGCCATCAAATCTTACTGATGTTTC TTGTCCTGTGAAGGATATTAGCTCTTTTGAGAAAATAGTCAACATCAGTAAACTCCAAGATGCATGCAGCAATGTTGACC CACTGAAAGAGTGTTGTAGGCCAGTTTGCCAACCTGCTATAGCAGAAGCAGCTATTCACATATCCTCTGGTGGGGCTAAC ATGTTCGGAAGTTCTAGCATGCCAGGGAGTGCTGTTGGGATTGATGTTGTTAGCGACTGTAAAGGGGTAGTTCATTCCTG GTTATCTATGAAGCTTTCATCAGAGGAAGCTAATAGTGCTTTCAGAGTATTATCTGGTTGCAAGGTGAACAAAGTTTGTC CACTGGAGTTTGATGAACCTTCTTCAGTCGTTAAGGCGTGTGGCAAGGCATCATCTTCAACGTTATCATGCTGCGCAGCA TTGCACTCTTACATTGGAACTAGGCAAAAACAGATATTTGTCACAAACCTGCAAGCAATTAATTGTGCAACAATGTTTGG ATCAATGTTACAGAAAGCTGGTGTGGTGGATGACATTTATGGGCTTTGCGACATTGATTTGAAAGATTTCAGCTTGCAAG ATTTTGGACAGCAAGGCTGTCTACTTCGGAGCTTACCTACAGATATTGTGTTTGACAACGCTACAGGCATTAGCTTTACA TGCGATTTGAGTGACAATATTGCAGCACCATGGCCATCCTCATCTTCTGTCCAATCATTGTCACTTTGTGCTCCAGAAAT GTCGCTGCCTGCTTTGCCTGTCTCGCCGAAATCAGAAAGCTCAGGTCCCTCCAGAACTGGGATCGGCGTTTTGTTGCTGC TTGTATTCCTCACTACCATCACTATCTGA |
Microexon DNA seq | ATTTTGGACAGCAAG |
Microexon Amino Acid seq | DFGQQG |
Microexon-tag DNA Seq | ATTTATGGGCTTTGCGACATTGATTTGAAAGATTTCAGCTTGCAAGATTTTGGACAGCAAGGCTGTCTACTTCGGAGCTTACCTACAGATATTGTGTTTGACAACGCT |
Microexon-tag Amino Acid seq | IYGLCDIDLKDFSLQDFGQQGCLLRSLPTDIVFDNA |
Transcript ID | Zm00001d029726_T001 |
Gene ID | Zm.1911 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d029726_T001 MDRSSSGSCGQGTVHHWLVLIVVWLCGSQHVVSQKSTLEPKDKFLLSDPPIGLFDPIEISPSVLPHNTNPVEPLSPMYPN YTSYDPVLTGKCHVNFSALSYIMEKTAYDCSIPLAPLVADVICCPQVNSLMNIFQAAYGSGNGTLVLNQASANACFSDIM NILASKGANTNIPELCTLRPSNLTDVSCPVKDISSFEKIVNISKLQDACSNVDPLKECCRPVCQPAIAEAAIHISSGGAN MFGSSSMPGSAVGIDVVSDCKGVVHSWLSMKLSSEEANSAFRVLSGCKVNKVCPLEFDEPSSVVKACGKASSSTLSCCAA LHSYIGTRQKQIFVTNLQAINCATMFGSMLQKAGVVDDIYGLCDIDLKDFSLQDFGQQGCLLRSLPTDIVFDNATGISFT CDLSDNIAAPWPSSSSVQSLSLCAPEMSLPALPVSPKSESSGPSRTGIGVLLLLVFLTTITI* |
CDS seq | >Zm00001d029726_T001 ATGGACAGATCCAGTTCTGGTTCTTGTGGTCAGGGTACAGTGCATCACTGGCTTGTGCTGATTGTGGTTTGGCTTTGTGG AAGCCAGCATGTTGTGTCTCAGAAATCGACACTTGAACCAAAAGATAAATTCCTTCTGTCTGATCCACCAATTGGCCTCT TTGATCCAATAGAGATTTCACCTTCTGTTCTTCCACACAATACTAACCCTGTTGAGCCACTGTCACCTATGTATCCAAAT TACACATCCTATGATCCAGTCTTGACTGGAAAATGCCATGTAAATTTTTCTGCACTCTCTTATATCATGGAGAAGACAGC GTATGATTGCTCCATTCCGTTAGCACCACTAGTTGCTGATGTTATATGTTGCCCCCAAGTTAATAGCTTGATGAATATTT TCCAAGCTGCATATGGCAGTGGAAATGGTACCCTAGTTCTCAACCAGGCTTCAGCAAATGCTTGTTTCTCTGACATTATG AACATCCTTGCAAGCAAAGGGGCAAACACCAACATCCCTGAGTTATGTACTCTGAGGCCATCAAATCTTACTGATGTTTC TTGTCCTGTGAAGGATATTAGCTCTTTTGAGAAAATAGTCAACATCAGTAAACTCCAAGATGCATGCAGCAATGTTGACC CACTGAAAGAGTGTTGTAGGCCAGTTTGCCAACCTGCTATAGCAGAAGCAGCTATTCACATATCCTCTGGTGGGGCTAAC ATGTTCGGAAGTTCTAGCATGCCAGGGAGTGCTGTTGGGATTGATGTTGTTAGCGACTGTAAAGGGGTAGTTCATTCCTG GTTATCTATGAAGCTTTCATCAGAGGAAGCTAATAGTGCTTTCAGAGTATTATCTGGTTGCAAGGTGAACAAAGTTTGTC CACTGGAGTTTGATGAACCTTCTTCAGTCGTTAAGGCGTGTGGCAAGGCATCATCTTCAACGTTATCATGCTGCGCAGCA TTGCACTCTTACATTGGAACTAGGCAAAAACAGATATTTGTCACAAACCTGCAAGCAATTAATTGTGCAACAATGTTTGG ATCAATGTTACAGAAAGCTGGTGTGGTGGATGACATTTATGGGCTTTGCGACATTGATTTGAAAGATTTCAGCTTGCAAG ATTTTGGACAGCAAGGCTGTCTACTTCGGAGCTTACCTACAGATATTGTGTTTGACAACGCTACAGGCATTAGCTTTACA TGCGATTTGAGTGACAATATTGCAGCACCATGGCCATCCTCATCTTCTGTCCAATCATTGTCACTTTGTGCTCCAGAAAT GTCGCTGCCTGCTTTGCCTGTCTCGCCGAAATCAGAAAGCTCAGGTCCCTCCAGAACTGGGATCGGCGTTTTGTTGCTGC TTGTATTCCTCACTACCATCACTATCTGA |