Microexon ID Zm_1:84229758-84229772:-
Species Zea mays
Coordinates 1:84229758..84229772
Microexon Cluster ID MEP44
Size 15
Phase 1
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,15,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATTTTGGACAGCAAG
Microexon Amino Acid seq DFGQQG
Microexon-tag DNA Seq ATTTATGGGCTTTGCGACATTGATTTGAAAGATTTCAGCTTGCAAGATTTTGGACAGCAAGGCTGTCTACTTCGGAGCTTACCTACAGATATTGTGTTTGACAACGCT
Microexon-tag Amino Acid Seq IYGLCDIDLKDFSLQDFGQQGCLLRSLPTDIVFDNA
Microexon-tag spanning region84229627-84229917
Microexon-tag prediction score0.9729
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d029726_T001x
Reference Transcript ID Zm00001d029726_T001
Gene ID Zm00001d029726
Gene Name NA
Transcript ID Zm00001d029726_T001
Protein ID Zm00001d029726_P001
Gene ID Zm00001d029726
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Zm00001d029726_P001
MDRSSSGSCGQGTVHHWLVLIVVWLCGSQHVVSQKSTLEPKDKFLLSDPPIGLFDPIEISPSVLPHNTNPVEPLSPMYPN
YTSYDPVLTGKCHVNFSALSYIMEKTAYDCSIPLAPLVADVICCPQVNSLMNIFQAAYGSGNGTLVLNQASANACFSDIM
NILASKGANTNIPELCTLRPSNLTDVSCPVKDISSFEKIVNISKLQDACSNVDPLKECCRPVCQPAIAEAAIHISSGGAN
MFGSSSMPGSAVGIDVVSDCKGVVHSWLSMKLSSEEANSAFRVLSGCKVNKVCPLEFDEPSSVVKACGKASSSTLSCCAA
LHSYIGTRQKQIFVTNLQAINCATMFGSMLQKAGVVDDIYGLCDIDLKDFSLQDFGQQGCLLRSLPTDIVFDNATGISFT
CDLSDNIAAPWPSSSSVQSLSLCAPEMSLPALPVSPKSESSGPSRTGIGVLLLLVFLTTITI*
CDS seq >Zm00001d029726_T001
ATGGACAGATCCAGTTCTGGTTCTTGTGGTCAGGGTACAGTGCATCACTGGCTTGTGCTGATTGTGGTTTGGCTTTGTGG
AAGCCAGCATGTTGTGTCTCAGAAATCGACACTTGAACCAAAAGATAAATTCCTTCTGTCTGATCCACCAATTGGCCTCT
TTGATCCAATAGAGATTTCACCTTCTGTTCTTCCACACAATACTAACCCTGTTGAGCCACTGTCACCTATGTATCCAAAT
TACACATCCTATGATCCAGTCTTGACTGGAAAATGCCATGTAAATTTTTCTGCACTCTCTTATATCATGGAGAAGACAGC
GTATGATTGCTCCATTCCGTTAGCACCACTAGTTGCTGATGTTATATGTTGCCCCCAAGTTAATAGCTTGATGAATATTT
TCCAAGCTGCATATGGCAGTGGAAATGGTACCCTAGTTCTCAACCAGGCTTCAGCAAATGCTTGTTTCTCTGACATTATG
AACATCCTTGCAAGCAAAGGGGCAAACACCAACATCCCTGAGTTATGTACTCTGAGGCCATCAAATCTTACTGATGTTTC
TTGTCCTGTGAAGGATATTAGCTCTTTTGAGAAAATAGTCAACATCAGTAAACTCCAAGATGCATGCAGCAATGTTGACC
CACTGAAAGAGTGTTGTAGGCCAGTTTGCCAACCTGCTATAGCAGAAGCAGCTATTCACATATCCTCTGGTGGGGCTAAC
ATGTTCGGAAGTTCTAGCATGCCAGGGAGTGCTGTTGGGATTGATGTTGTTAGCGACTGTAAAGGGGTAGTTCATTCCTG
GTTATCTATGAAGCTTTCATCAGAGGAAGCTAATAGTGCTTTCAGAGTATTATCTGGTTGCAAGGTGAACAAAGTTTGTC
CACTGGAGTTTGATGAACCTTCTTCAGTCGTTAAGGCGTGTGGCAAGGCATCATCTTCAACGTTATCATGCTGCGCAGCA
TTGCACTCTTACATTGGAACTAGGCAAAAACAGATATTTGTCACAAACCTGCAAGCAATTAATTGTGCAACAATGTTTGG
ATCAATGTTACAGAAAGCTGGTGTGGTGGATGACATTTATGGGCTTTGCGACATTGATTTGAAAGATTTCAGCTTGCAAG
ATTTTGGACAGCAAGGCTGTCTACTTCGGAGCTTACCTACAGATATTGTGTTTGACAACGCTACAGGCATTAGCTTTACA
TGCGATTTGAGTGACAATATTGCAGCACCATGGCCATCCTCATCTTCTGTCCAATCATTGTCACTTTGTGCTCCAGAAAT
GTCGCTGCCTGCTTTGCCTGTCTCGCCGAAATCAGAAAGCTCAGGTCCCTCCAGAACTGGGATCGGCGTTTTGTTGCTGC
TTGTATTCCTCACTACCATCACTATCTGA
Microexon DNA seq ATTTTGGACAGCAAG
Microexon Amino Acid seq DFGQQG
Microexon-tag DNA Seq ATTTATGGGCTTTGCGACATTGATTTGAAAGATTTCAGCTTGCAAGATTTTGGACAGCAAGGCTGTCTACTTCGGAGCTTACCTACAGATATTGTGTTTGACAACGCT
Microexon-tag Amino Acid seq IYGLCDIDLKDFSLQDFGQQGCLLRSLPTDIVFDNA
Transcript ID Zm00001d029726_T001
Gene ID Zm.1911
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Zm00001d029726_T001
MDRSSSGSCGQGTVHHWLVLIVVWLCGSQHVVSQKSTLEPKDKFLLSDPPIGLFDPIEISPSVLPHNTNPVEPLSPMYPN
YTSYDPVLTGKCHVNFSALSYIMEKTAYDCSIPLAPLVADVICCPQVNSLMNIFQAAYGSGNGTLVLNQASANACFSDIM
NILASKGANTNIPELCTLRPSNLTDVSCPVKDISSFEKIVNISKLQDACSNVDPLKECCRPVCQPAIAEAAIHISSGGAN
MFGSSSMPGSAVGIDVVSDCKGVVHSWLSMKLSSEEANSAFRVLSGCKVNKVCPLEFDEPSSVVKACGKASSSTLSCCAA
LHSYIGTRQKQIFVTNLQAINCATMFGSMLQKAGVVDDIYGLCDIDLKDFSLQDFGQQGCLLRSLPTDIVFDNATGISFT
CDLSDNIAAPWPSSSSVQSLSLCAPEMSLPALPVSPKSESSGPSRTGIGVLLLLVFLTTITI*
CDS seq >Zm00001d029726_T001
ATGGACAGATCCAGTTCTGGTTCTTGTGGTCAGGGTACAGTGCATCACTGGCTTGTGCTGATTGTGGTTTGGCTTTGTGG
AAGCCAGCATGTTGTGTCTCAGAAATCGACACTTGAACCAAAAGATAAATTCCTTCTGTCTGATCCACCAATTGGCCTCT
TTGATCCAATAGAGATTTCACCTTCTGTTCTTCCACACAATACTAACCCTGTTGAGCCACTGTCACCTATGTATCCAAAT
TACACATCCTATGATCCAGTCTTGACTGGAAAATGCCATGTAAATTTTTCTGCACTCTCTTATATCATGGAGAAGACAGC
GTATGATTGCTCCATTCCGTTAGCACCACTAGTTGCTGATGTTATATGTTGCCCCCAAGTTAATAGCTTGATGAATATTT
TCCAAGCTGCATATGGCAGTGGAAATGGTACCCTAGTTCTCAACCAGGCTTCAGCAAATGCTTGTTTCTCTGACATTATG
AACATCCTTGCAAGCAAAGGGGCAAACACCAACATCCCTGAGTTATGTACTCTGAGGCCATCAAATCTTACTGATGTTTC
TTGTCCTGTGAAGGATATTAGCTCTTTTGAGAAAATAGTCAACATCAGTAAACTCCAAGATGCATGCAGCAATGTTGACC
CACTGAAAGAGTGTTGTAGGCCAGTTTGCCAACCTGCTATAGCAGAAGCAGCTATTCACATATCCTCTGGTGGGGCTAAC
ATGTTCGGAAGTTCTAGCATGCCAGGGAGTGCTGTTGGGATTGATGTTGTTAGCGACTGTAAAGGGGTAGTTCATTCCTG
GTTATCTATGAAGCTTTCATCAGAGGAAGCTAATAGTGCTTTCAGAGTATTATCTGGTTGCAAGGTGAACAAAGTTTGTC
CACTGGAGTTTGATGAACCTTCTTCAGTCGTTAAGGCGTGTGGCAAGGCATCATCTTCAACGTTATCATGCTGCGCAGCA
TTGCACTCTTACATTGGAACTAGGCAAAAACAGATATTTGTCACAAACCTGCAAGCAATTAATTGTGCAACAATGTTTGG
ATCAATGTTACAGAAAGCTGGTGTGGTGGATGACATTTATGGGCTTTGCGACATTGATTTGAAAGATTTCAGCTTGCAAG
ATTTTGGACAGCAAGGCTGTCTACTTCGGAGCTTACCTACAGATATTGTGTTTGACAACGCTACAGGCATTAGCTTTACA
TGCGATTTGAGTGACAATATTGCAGCACCATGGCCATCCTCATCTTCTGTCCAATCATTGTCACTTTGTGCTCCAGAAAT
GTCGCTGCCTGCTTTGCCTGTCTCGCCGAAATCAGAAAGCTCAGGTCCCTCCAGAACTGGGATCGGCGTTTTGTTGCTGC
TTGTATTCCTCACTACCATCACTATCTGA