Microexon ID Vv_5:23450148-23450162:-
Species Vistis vinifera
Coordinates 5:23450148..23450162
Microexon Cluster ID MEP44
Size 15
Phase 1
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,15,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq CATATGGACAACAAG
Microexon Amino Acid seq AYGQQG
Microexon-tag DNA Seq ATTTATGAGCTTTGTGATGTTGATCTGAAAGATTTTAGTCTTCAAGCATATGGACAACAAGGATGTCTACTTCGAAGCTTGCCTGCAGATGTGGACTTTGACAATTCA
Microexon-tag Amino Acid Seq IYELCDVDLKDFSLQAYGQQGCLLRSLPADVDFDNS
Microexon-tag spanning region23449739-23450345
Microexon-tag prediction score0.9796
Overlapped with the annotated transcript (%) 100
New Transcript ID VIT_05s0094g00050.t01x
Reference Transcript ID VIT_05s0094g00050.t01
Gene ID VIT_05s0094g00050
Gene Name NA
Transcript ID VIT_05s0094g00050.t01
Protein ID VIT_05s0094g00050.t01
Gene ID VIT_05s0094g00050
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >VIT_05s0094g00050.t01
MQTLKKWSYLVAGSLCGQFFLFTIWLSSFQDVVGLLTLVEYSHVSSTTELAKPPNTDLFEPIEISPAVFPHLPSPTESFP
PMYPSFPATYEPVLTGKCPVNFSAISSILNKTASDCSLPLASLVGNVICCPQFSSLLHIFQGYYSTNSDKLVLQDGMAND
CFSDIISILASRGANSTIPTICSVKSSNLTGGSCPIKDVSTFEKTVNTSKLLEACSTVDPLKECCRPVCRPAIMDAAVQI
SVRHSVMSDNKNILGETSHVDVLNDCKGVVSSWLSRKLSSDAANTTFRILSACKVNKVCPLNFSQPTDVIKACRNIAAPS
PSCCSSLNTYIAGIQKQMLITNRQAIMCATMFGSMLQKGGVMTNIYELCDVDLKDFSLQAYGQQGCLLRSLPADVDFDNS
TGFSFTCDLSDNIAAPWPSSTSISSLSLCAPEMSLPALPTSQTSGNSGCDGGRLKFLVSIFLFFVLSTLLC*
CDS seq >VIT_05s0094g00050.t01
ATGCAAACACTGAAGAAATGGTCATATCTGGTTGCAGGTTCTTTGTGCGGCCAGTTCTTTTTATTCACCATCTGGTTATC
CAGTTTCCAAGATGTAGTGGGACTGCTGACACTTGTTGAGTATAGTCATGTATCTTCCACGACTGAGCTAGCAAAACCAC
CTAATACTGATCTCTTTGAACCCATAGAAATATCACCTGCTGTTTTTCCACATCTTCCATCTCCTACAGAATCTTTTCCA
CCAATGTATCCATCCTTTCCGGCTACATATGAGCCAGTCTTGACAGGGAAATGCCCTGTAAATTTCTCTGCTATTTCAAG
TATCTTGAACAAAACAGCATCTGATTGTTCTCTACCTTTGGCATCTCTTGTCGGAAATGTAATATGTTGTCCACAGTTTA
GTAGTTTACTCCACATCTTTCAGGGTTACTACAGCACCAATTCTGATAAATTAGTTTTGCAAGATGGAATGGCTAATGAT
TGTTTTTCAGATATTATTAGTATATTAGCCAGCAGAGGAGCAAACAGTACAATACCTACAATTTGCTCTGTGAAGTCATC
AAACCTTACGGGTGGGTCTTGTCCTATAAAGGATGTAAGTACCTTTGAAAAAACAGTAAATACAAGCAAATTATTGGAGG
CCTGCAGCACTGTTGATCCTCTTAAAGAGTGCTGTAGGCCAGTTTGCCGGCCCGCAATTATGGATGCTGCAGTTCAGATC
TCAGTAAGACATTCAGTGATGAGTGACAATAAAAATATATTAGGGGAAACTAGTCATGTTGACGTTCTTAATGATTGTAA
GGGAGTGGTATCTTCATGGCTTTCTAGAAAACTCTCATCAGATGCTGCAAATACTACATTTCGAATATTGTCTGCCTGCA
AAGTTAACAAAGTTTGCCCTCTGAATTTTAGCCAGCCTACGGATGTGATTAAAGCATGCCGTAACATTGCTGCACCAAGT
CCTTCCTGCTGTAGCTCATTAAATACATACATTGCGGGGATACAGAAACAAATGTTAATCACAAATAGACAAGCAATAAT
GTGCGCAACAATGTTTGGCTCCATGTTGCAAAAAGGTGGGGTCATGACAAATATTTATGAGCTTTGTGATGTTGATCTGA
AAGATTTTAGTCTTCAAGCATATGGACAACAAGGATGTCTACTTCGAAGCTTGCCTGCAGATGTGGACTTTGACAATTCA
ACAGGCTTCAGCTTTACGTGTGACTTGAGTGATAATATTGCAGCTCCATGGCCTTCATCGACCTCAATTTCGTCCTTGTC
TCTTTGTGCTCCGGAGATGTCACTGCCTGCTCTACCAACATCGCAGACTTCAGGAAATTCTGGCTGTGATGGTGGTCGGC
TGAAATTCCTTGTATCCATTTTTTTGTTTTTTGTTCTCAGTACACTGTTGTGCTGA
Microexon DNA seq CATATGGACAACAAG
Microexon Amino Acid seq AYGQQG
Microexon-tag DNA Seq ATTTATGAGCTTTGTGATGTTGATCTGAAAGATTTTAGTCTTCAAGCATATGGACAACAAGGATGTCTACTTCGAAGCTTGCCTGCAGATGTGGACTTTGACAATTCA
Microexon-tag Amino Acid seq IYELCDVDLKDFSLQAYGQQGCLLRSLPADVDFDNS
Transcript ID Vv.26071.1
Gene ID Vv.26071
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Vv.26071.1
MDCLQIITRHKGSLCGQFFLFTIWLSSFQDVVGLLTLVEYSHVSSTTELAKPPNTDLFEPIEISPAVFPHLPSPTESFPP
MYPSFPATYEPVLTGKCPVNFSAISSILNKTASDCSLPLASLVGNVICCPQFSSLLHIFQGYYSTNSDKLVLQDGMANDC
FSDIISILASRGANSTIPTICSVKSSNLTGGSCPIKDVSTFEKTVNTSKLLEACSTVDPLKECCRPVCRPAIMDAAVQIS
VRHSVMSDNKNILGETSHVDVLNDCKGVVSSWLSRKLSSDAANTTFRILSACKVNKVCPLNFSQPTDVIKACRNIAAPSP
SCCSSLNTYIAGIQKQMLITNRQAIMCATMFGSMLQKGGVMTNIYELCDVDLKDFSLQAYGQQGCLLRSLPADVDFDNST
GFSFTCDLSDNIAAPWPSSTSISSLSLCAPEMSLPALPTSQTSGNSGCDGGRLKFLVSIFLFFVLSTLLC*
CDS seq >Vv.26071.1
ATGGACTGTCTACAGATCATTACTCGTCATAAGGGTTCTTTGTGCGGCCAGTTCTTTTTATTCACCATCTGGTTATCCAG
TTTCCAAGATGTAGTGGGACTGCTGACACTTGTTGAGTATAGTCATGTATCTTCCACGACTGAGCTAGCAAAACCACCTA
ATACTGATCTCTTTGAACCCATAGAAATATCACCTGCTGTTTTTCCACATCTTCCATCTCCTACAGAATCTTTTCCACCA
ATGTATCCATCCTTTCCGGCTACATATGAGCCAGTCTTGACAGGGAAATGCCCTGTAAATTTCTCTGCTATTTCAAGTAT
CTTGAACAAAACAGCATCTGATTGTTCTCTACCTTTGGCATCTCTTGTCGGAAATGTAATATGTTGTCCACAGTTTAGTA
GTTTACTCCACATCTTTCAGGGTTACTACAGCACCAATTCTGATAAATTAGTTTTGCAAGATGGAATGGCTAATGATTGT
TTTTCAGATATTATTAGTATATTAGCCAGCAGAGGAGCAAACAGTACAATACCTACAATTTGCTCTGTGAAGTCATCAAA
CCTTACGGGTGGGTCTTGTCCTATAAAGGATGTAAGTACCTTTGAAAAAACAGTAAATACAAGCAAATTATTGGAGGCCT
GCAGCACTGTTGATCCTCTTAAAGAGTGCTGTAGGCCAGTTTGCCGGCCCGCAATTATGGATGCTGCAGTTCAGATCTCA
GTAAGACATTCAGTGATGAGTGACAATAAAAATATATTAGGGGAAACTAGTCATGTTGACGTTCTTAATGATTGTAAGGG
AGTGGTATCTTCATGGCTTTCTAGAAAACTCTCATCAGATGCTGCAAATACTACATTTCGAATATTGTCTGCCTGCAAAG
TTAACAAAGTTTGCCCTCTGAATTTTAGCCAGCCTACGGATGTGATTAAAGCATGCCGTAACATTGCTGCACCAAGTCCT
TCCTGCTGTAGCTCATTAAATACATACATTGCGGGGATACAGAAACAAATGTTAATCACAAATAGACAAGCAATAATGTG
CGCAACAATGTTTGGCTCCATGTTGCAAAAAGGTGGGGTCATGACAAATATTTATGAGCTTTGTGATGTTGATCTGAAAG
ATTTTAGTCTTCAAGCATATGGACAACAAGGATGTCTACTTCGAAGCTTGCCTGCAGATGTGGACTTTGACAATTCAACA
GGCTTCAGCTTTACGTGTGACTTGAGTGATAATATTGCAGCTCCATGGCCTTCATCGACCTCAATTTCGTCCTTGTCTCT
TTGTGCTCCGGAGATGTCACTGCCTGCTCTACCAACATCGCAGACTTCAGGAAATTCTGGCTGTGATGGTGGTCGGCTGA
AATTCCTTGTATCCATTTTTTTGTTTTTTGTTCTCAGTACACTGTTGTGCTGA