
Microexon ID | Ta_1D:268929965-268929979:- |
Species | Triticum Aestivum | Coordinates | 1D:268929965..268929979 |
Microexon Cluster ID | MEP44 |
Size | 15 |
Phase | 1 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,15,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CTTTTGGGCAGCAAG |
Microexon Amino Acid seq | AFGQQG |
Microexon-tag DNA Seq | ATTTATGGGCTGTGTGATATTGACTTGAAAGATTTTAGCCTGCAAGCTTTTGGGCAGCAAGGTTGTCTACTTCGGAGCTTACCTACGGACATTGTATTCGACAACGTT |
Microexon-tag Amino Acid Seq | IYGLCDIDLKDFSLQAFGQQGCLLRSLPTDIVFDNV |
Microexon-tag spanning region | 268929748-268930125 |
Microexon-tag prediction score | 0.98 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1D02G192500.1x |
Reference Transcript ID | TraesCS1D02G192500.1 |
Gene ID | TraesCS1D02G192500 |
Gene Name | NA |
Transcript ID | TraesCS1D02G192500.1 |
Protein ID | |
Gene ID | TraesCS1D02G192500 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >TraesCS1D02G192500.1 MERASGSCFHVCHWLVLVLIWLCGCQHVLSQQTTLQPKDKFLLSDPPIGLFDPIEISPSVLPHNTNPVEPLSPMYPNYTS YDPVLTGKCHVNFSDLSFIMDKTASDCSVPLAPLVADVICCPQVSSLMNIFQAAYGGGNNTLVLNQASANACFSDIMSIL ASKGANTNIPELCTLRPSNLTDASCPVKDISSFERMVNVSKLLDACSSVDPLKECCRPVCQPAIVEAAVHISSGGASMFG STTIPGSAVGINTVSDCKGVVHSYLSVKLSSEVANSAFRVLSGCKVNKVCPLEFDDPSSVVKACGKASSRPSCCTALQSY IATRQKQIFVTNLQAINCATMFGSMLQKAGVGNDIYGLCDIDLKDFSLQAFGQQGCLLRSLPTDIVFDNVTGISFTCDLS DNIAAPWPSSSSLQSLSLCAPEMSLPALPVSPLSGSSARISRTGIGILLPVVLFTTTISI* |
CDS seq | >TraesCS1D02G192500.1 ATGGAGAGGGCCTCTGGTTCTTGTTTTCATGTGTGTCATTGGCTTGTATTGGTATTGATATGGCTTTGTGGCTGTCAGCA TGTTCTGTCTCAGCAAACGACACTTCAACCAAAAGATAAATTTCTTCTGTCTGACCCACCTATTGGTCTCTTTGATCCGA TAGAGATTTCGCCATCTGTTCTCCCACACAATACCAACCCAGTTGAGCCACTGTCACCAATGTATCCAAACTACACATCC TATGATCCGGTTTTGACTGGAAAATGCCATGTGAACTTTTCTGATCTCTCTTTTATTATGGACAAGACAGCGTCTGATTG TTCTGTACCTTTAGCACCACTGGTTGCCGATGTTATATGTTGTCCCCAAGTTAGTAGCTTGATGAATATATTCCAAGCTG CATATGGTGGTGGAAACAATACGCTTGTTCTCAATCAAGCTTCAGCAAATGCTTGTTTCTCTGACATCATGAGCATACTT GCAAGTAAAGGGGCAAACACCAACATCCCTGAGTTGTGTACTCTGAGGCCGTCAAATCTTACTGATGCTTCTTGTCCCGT GAAGGATATTAGTTCGTTTGAGAGAATGGTTAACGTAAGCAAACTCCTGGATGCATGCAGCAGTGTTGATCCACTGAAAG AGTGTTGTAGGCCAGTTTGCCAACCTGCAATAGTGGAGGCAGCGGTTCATATATCCTCAGGAGGGGCAAGCATGTTCGGA AGTACTACCATACCTGGGAGTGCGGTTGGAATTAATACTGTCAGTGACTGTAAAGGGGTGGTTCACTCCTACTTATCTGT GAAACTTTCATCAGAAGTGGCGAACAGTGCTTTCAGAGTATTATCTGGCTGCAAGGTGAACAAAGTCTGTCCACTGGAGT TCGATGATCCTTCTTCAGTCGTTAAGGCATGTGGCAAGGCATCTTCAAGGCCTTCATGCTGCACAGCGTTGCAATCTTAT ATCGCAACTAGACAGAAACAAATATTTGTCACAAACTTGCAAGCAATTAACTGTGCAACAATGTTCGGATCAATGCTACA GAAAGCTGGTGTGGGGAATGATATTTATGGGCTGTGTGATATTGACTTGAAAGATTTTAGCCTGCAAGCTTTTGGGCAGC AAGGTTGTCTACTTCGGAGCTTACCTACGGACATTGTATTCGACAACGTTACGGGCATTAGCTTTACGTGTGATTTGAGT GACAATATTGCAGCACCATGGCCATCGTCATCGTCTCTCCAGTCTTTGTCGCTGTGTGCTCCAGAAATGTCATTGCCTGC ATTACCGGTCTCGCCGTTATCAGGAAGCTCAGCACGTATCTCCAGAACTGGAATTGGGATTCTGCTGCCTGTTGTGCTCT TCACCACGACCATCTCCATCTGA |
Ta_1D:268929965-268929979:- does not have available information here.