Microexon ID Ta_1D:268929965-268929979:-
Species Triticum   Aestivum
Coordinates 1D:268929965..268929979
Microexon Cluster ID MEP44
Size 15
Phase 1
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,15,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq CTTTTGGGCAGCAAG
Microexon Amino Acid seq AFGQQG
Microexon-tag DNA Seq ATTTATGGGCTGTGTGATATTGACTTGAAAGATTTTAGCCTGCAAGCTTTTGGGCAGCAAGGTTGTCTACTTCGGAGCTTACCTACGGACATTGTATTCGACAACGTT
Microexon-tag Amino Acid Seq IYGLCDIDLKDFSLQAFGQQGCLLRSLPTDIVFDNV
Microexon-tag spanning region268929748-268930125
Microexon-tag prediction score0.98
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS1D02G192500.1x
Reference Transcript ID TraesCS1D02G192500.1
Gene ID TraesCS1D02G192500
Gene Name NA
Transcript ID TraesCS1D02G192500.1
Protein ID
Gene ID TraesCS1D02G192500
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >TraesCS1D02G192500.1
MERASGSCFHVCHWLVLVLIWLCGCQHVLSQQTTLQPKDKFLLSDPPIGLFDPIEISPSVLPHNTNPVEPLSPMYPNYTS
YDPVLTGKCHVNFSDLSFIMDKTASDCSVPLAPLVADVICCPQVSSLMNIFQAAYGGGNNTLVLNQASANACFSDIMSIL
ASKGANTNIPELCTLRPSNLTDASCPVKDISSFERMVNVSKLLDACSSVDPLKECCRPVCQPAIVEAAVHISSGGASMFG
STTIPGSAVGINTVSDCKGVVHSYLSVKLSSEVANSAFRVLSGCKVNKVCPLEFDDPSSVVKACGKASSRPSCCTALQSY
IATRQKQIFVTNLQAINCATMFGSMLQKAGVGNDIYGLCDIDLKDFSLQAFGQQGCLLRSLPTDIVFDNVTGISFTCDLS
DNIAAPWPSSSSLQSLSLCAPEMSLPALPVSPLSGSSARISRTGIGILLPVVLFTTTISI*
CDS seq >TraesCS1D02G192500.1
ATGGAGAGGGCCTCTGGTTCTTGTTTTCATGTGTGTCATTGGCTTGTATTGGTATTGATATGGCTTTGTGGCTGTCAGCA
TGTTCTGTCTCAGCAAACGACACTTCAACCAAAAGATAAATTTCTTCTGTCTGACCCACCTATTGGTCTCTTTGATCCGA
TAGAGATTTCGCCATCTGTTCTCCCACACAATACCAACCCAGTTGAGCCACTGTCACCAATGTATCCAAACTACACATCC
TATGATCCGGTTTTGACTGGAAAATGCCATGTGAACTTTTCTGATCTCTCTTTTATTATGGACAAGACAGCGTCTGATTG
TTCTGTACCTTTAGCACCACTGGTTGCCGATGTTATATGTTGTCCCCAAGTTAGTAGCTTGATGAATATATTCCAAGCTG
CATATGGTGGTGGAAACAATACGCTTGTTCTCAATCAAGCTTCAGCAAATGCTTGTTTCTCTGACATCATGAGCATACTT
GCAAGTAAAGGGGCAAACACCAACATCCCTGAGTTGTGTACTCTGAGGCCGTCAAATCTTACTGATGCTTCTTGTCCCGT
GAAGGATATTAGTTCGTTTGAGAGAATGGTTAACGTAAGCAAACTCCTGGATGCATGCAGCAGTGTTGATCCACTGAAAG
AGTGTTGTAGGCCAGTTTGCCAACCTGCAATAGTGGAGGCAGCGGTTCATATATCCTCAGGAGGGGCAAGCATGTTCGGA
AGTACTACCATACCTGGGAGTGCGGTTGGAATTAATACTGTCAGTGACTGTAAAGGGGTGGTTCACTCCTACTTATCTGT
GAAACTTTCATCAGAAGTGGCGAACAGTGCTTTCAGAGTATTATCTGGCTGCAAGGTGAACAAAGTCTGTCCACTGGAGT
TCGATGATCCTTCTTCAGTCGTTAAGGCATGTGGCAAGGCATCTTCAAGGCCTTCATGCTGCACAGCGTTGCAATCTTAT
ATCGCAACTAGACAGAAACAAATATTTGTCACAAACTTGCAAGCAATTAACTGTGCAACAATGTTCGGATCAATGCTACA
GAAAGCTGGTGTGGGGAATGATATTTATGGGCTGTGTGATATTGACTTGAAAGATTTTAGCCTGCAAGCTTTTGGGCAGC
AAGGTTGTCTACTTCGGAGCTTACCTACGGACATTGTATTCGACAACGTTACGGGCATTAGCTTTACGTGTGATTTGAGT
GACAATATTGCAGCACCATGGCCATCGTCATCGTCTCTCCAGTCTTTGTCGCTGTGTGCTCCAGAAATGTCATTGCCTGC
ATTACCGGTCTCGCCGTTATCAGGAAGCTCAGCACGTATCTCCAGAACTGGAATTGGGATTCTGCTGCCTGTTGTGCTCT
TCACCACGACCATCTCCATCTGA
Ta_1D:268929965-268929979:- does not have available information here.