
Microexon ID | Ta_1A:333921346-333921360:+ |
Species | Triticum Aestivum | Coordinates | 1A:333921346..333921360 |
Microexon Cluster ID | MEP44 |
Size | 15 |
Phase | 1 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,15,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CTTTTGGGCAGCAAG |
Microexon Amino Acid seq | AFGQQG |
Microexon-tag DNA Seq | ATTTATGGGCTGTGTGATATTGACCTGAAAGATTTTAGCCTGCAAGCTTTTGGGCAGCAAGGTTGTCTACTTCGGAGCTTACCTACGGACATTGTATTCGACAACGTT |
Microexon-tag Amino Acid Seq | IYGLCDIDLKDFSLQAFGQQGCLLRSLPTDIVFDNV |
Microexon-tag spanning region | 333921105-333921494 |
Microexon-tag prediction score | 0.9777 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1A02G184100.1x |
Reference Transcript ID | TraesCS1A02G184100.1 |
Gene ID | TraesCS1A02G184100 |
Gene Name | NA |
Transcript ID | TraesCS1A02G184100.1 |
Protein ID | |
Gene ID | TraesCS1A02G184100 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >TraesCS1A02G184100.1 MERGSGSCFHGIVCHWLVLVLIWLCGCQHVLSQQTTLKPKDKFLLSDPPIGLFDPIEISPSVLPHNTNPVEPLSPMYPNY TSYDPVLTGKCHVNFSDLSFIMDKTASDCSVPLAPLVADVICCPQVSSLMDIFQAAYGGGNNTLVLNQASANACFSDIMS ILASKGANTNIPELCTLRPSNLTDASCPVKDISSFERMVNVSKLLDACSSVDPLKECCRPVCQPAIVEAAVHISSGGASM FGSTTIPGSAAGINTVSDCKGVVHSYLSMKLSSEVANTAFRVLSGCKVNKVCPLEFDDPSSVVKACGKASSRPSCCTALQ SYIATRQKQIFVTNLQAINCATMFGSMLQKAGVGNDIYGLCDIDLKDFSLQAFGQQGCLLRSLPTDIVFDNVTGISFTCD LSDNIVAPWPSSSSLQSLSLCAPEMSLPALPVSPLSGSSAGISRTGIGILLPVVLLTTTISL* |
CDS seq | >TraesCS1A02G184100.1 ATGGAGAGGGGCTCTGGTTCTTGTTTTCATGGTATAGTGTGTCATTGGCTTGTATTGGTATTGATATGGCTTTGTGGCTG TCAACATGTTCTGTCTCAGCAAACGACACTTAAACCAAAAGATAAATTTCTTCTGTCTGACCCACCTATTGGTCTCTTTG ATCCGATAGAGATTTCGCCATCTGTTCTCCCACACAATACCAACCCAGTCGAGCCACTGTCACCAATGTATCCAAACTAC ACATCCTATGATCCGGTTTTGACTGGAAAATGCCATGTGAACTTTTCTGATCTCTCTTTTATTATGGACAAGACGGCGTC TGATTGTTCTGTACCTTTAGCACCACTAGTTGCCGATGTTATATGTTGTCCCCAAGTTAGTAGCTTGATGGATATATTCC AAGCTGCATATGGTGGTGGAAACAATACGCTTGTTCTCAATCAAGCTTCAGCAAATGCTTGTTTCTCTGACATCATGAGC ATACTTGCAAGTAAAGGGGCAAACACCAACATCCCTGAGTTGTGTACTCTGAGGCCATCAAATCTTACTGATGCTTCTTG TCCCGTGAAGGATATTAGCTCGTTTGAGAGAATGGTTAATGTAAGCAAACTCCTGGATGCATGCAGCAGTGTTGATCCAC TGAAAGAGTGTTGTAGGCCAGTTTGCCAACCTGCAATAGTGGAGGCAGCGGTTCATATATCCTCAGGAGGGGCAAGCATG TTCGGAAGTACTACCATACCTGGAAGTGCGGCTGGAATTAATACTGTCAGTGACTGTAAAGGGGTGGTTCACTCCTACTT ATCTATGAAACTTTCATCAGAAGTGGCGAACACTGCTTTCAGAGTATTATCTGGCTGCAAGGTGAACAAAGTCTGTCCAC TGGAGTTCGATGATCCTTCTTCAGTCGTTAAGGCATGTGGCAAGGCATCTTCAAGGCCTTCATGCTGCACAGCGTTGCAA TCTTATATCGCAACTAGACAGAAACAAATATTTGTCACAAACTTGCAAGCAATTAACTGTGCAACAATGTTCGGATCAAT GCTACAGAAAGCTGGTGTGGGGAATGATATTTATGGGCTGTGTGATATTGACCTGAAAGATTTTAGCCTGCAAGCTTTTG GGCAGCAAGGTTGTCTACTTCGGAGCTTACCTACGGACATTGTATTCGACAACGTTACGGGCATTAGCTTTACGTGTGAT TTGAGTGACAATATTGTAGCACCATGGCCATCGTCATCGTCTCTCCAGTCTTTGTCGCTGTGTGCTCCAGAAATGTCATT GCCTGCATTACCGGTCTCGCCATTATCAGGAAGCTCAGCAGGTATCTCCAGAACTGGAATTGGGATTCTGCTGCCTGTTG TGCTCCTCACCACGACCATCTCCCTCTGA |
Ta_1A:333921346-333921360:+ does not have available information here.