
Microexon ID | Sm_GL377579:907715-907729:+ |
Species | Selaginella moellendorffii | Coordinates | GL377579:907715..907729 |
Microexon Cluster ID | MEP44 |
Size | 15 |
Phase | 1 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,15,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Sm_GL377579:907715-907729:+ does not have available information here.
Sm_GL377579:907715-907729:+ does not have available information here.
Microexon DNA seq | GTGCTGGAGATCAAG |
Microexon Amino Acid seq | GAGDQG |
Microexon-tag DNA Seq | ATTTACGATCTATGCGGCATCTATCTCAAAGATTTCAGCCTTCAAGGTGCTGGAGATCAAGGGTGCTTGCTAAATAGCTTGCCGTCTGATGTGATGATCACGAGTAGC |
Microexon-tag Amino Acid seq | IYDLCGIYLKDFSLQGAGDQGCLLNSLPSDVMITSS |
Transcript ID | Sm.9507.1 |
Gene ID | Sm.9507 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Sm.9507.1 MAARILAIVLLWLVGFGDLKAEEALPAFDGNLSIPAVVGAQPPFFLPVSPSAPGAIPIVSPSPMIPVLPNPSSPKLSGHC KLNFSALTPAIDRTAQDCLAPLALYVGEVICCPQLQTLFRLAQGHHINTSGRLTFNRTEASYCFSDISSLLVSKGANTTV SEICSMEPKSLTGGQCPVYETKELYRLVNTSRLLPACKGVDPLKECCKPVCQPALEEAALQLASNGSFGFVKQSGLVPAS ADDQVLEDCKDVVLAWVAGQLNLTESNTALRNLFSCKVNKACPLVFSDVSAVVDDCHGLSPSNVTCCSSLHRYISEMQQQ KLITNLQALECVSLLGSMLQKRGVTSNIYDLCGIYLKDFSLQGAGDQGCLLNSLPSDVMITSSSGITFTCDLNDNIAAPW MPMSSSSLCSGGRPNISFPKIPQSAAPLTSGTNFARASSITAFVAPLLILVILSTSI* |
CDS seq | >Sm.9507.1 ATGGCGGCACGGATCCTTGCCATCGTCTTGCTCTGGCTTGTAGGTTTTGGAGATCTCAAGGCCGAGGAGGCGCTACCAGC ATTCGATGGGAATCTGTCGATTCCCGCGGTTGTAGGCGCGCAGCCGCCCTTCTTCCTGCCTGTGTCGCCGAGCGCGCCTG GAGCGATCCCCATTGTCTCGCCATCGCCTATGATTCCAGTTCTGCCCAATCCATCCTCGCCAAAGCTATCAGGACACTGT AAGCTCAACTTCTCGGCTCTAACTCCAGCAATCGATCGAACAGCACAAGATTGTCTCGCTCCCTTGGCATTGTACGTGGG CGAGGTTATCTGCTGCCCACAGTTGCAGACACTCTTTCGTCTAGCTCAAGGGCATCACATTAACACGTCCGGTCGGCTCA CTTTCAATCGTACTGAAGCAAGCTACTGTTTCTCCGACATTAGCAGCCTGCTGGTGAGCAAAGGAGCCAACACCACCGTA TCGGAGATATGTTCCATGGAGCCGAAAAGCTTGACAGGAGGGCAGTGTCCGGTGTACGAGACAAAGGAGCTCTACAGGCT TGTCAACACTTCTAGGCTTCTCCCGGCCTGCAAAGGAGTGGACCCCCTGAAAGAATGCTGCAAGCCGGTTTGCCAGCCAG CGCTCGAAGAGGCCGCGTTACAGCTCGCCTCGAATGGCTCATTTGGATTCGTGAAACAGAGCGGACTTGTTCCAGCCTCG GCGGATGATCAAGTGTTGGAAGACTGCAAGGACGTTGTTCTTGCTTGGGTCGCTGGTCAGCTCAATCTAACCGAGTCTAA CACGGCACTCCGGAATCTATTCAGCTGTAAGGTTAACAAAGCGTGTCCTTTGGTTTTTAGCGACGTATCTGCAGTAGTCG ATGATTGCCATGGACTCTCGCCATCCAACGTTACCTGTTGCAGCTCGCTGCACAGATACATCTCCGAAATGCAGCAGCAG AAGCTGATCACGAACTTGCAAGCGCTAGAGTGTGTGAGTTTACTCGGCTCGATGCTGCAAAAGCGGGGTGTTACAAGCAA TATTTACGATCTATGCGGCATCTATCTCAAAGATTTCAGCCTTCAAGGTGCTGGAGATCAAGGGTGCTTGCTAAATAGCT TGCCGTCTGATGTGATGATCACGAGTAGCTCCGGCATCACCTTCACTTGCGACTTGAATGACAACATCGCTGCTCCATGG ATGCCAATGTCTTCGAGTTCCCTGTGCTCTGGAGGAAGGCCAAACATTTCCTTCCCAAAAATCCCACAATCCGCGGCTCC CCTCACGTCTGGAACTAACTTCGCAAGAGCCAGCTCGATCACTGCGTTTGTAGCTCCGCTCCTGATCCTGGTGATACTAT CAACTTCGATTTGA |