Microexon ID Sb_1:60377766-60377780:+
Species Sorghum   Bicolor
Coordinates 1:60377766..60377780
Microexon Cluster ID MEP44
Size 15
Phase 1
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,15,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq CTTTTGGACAGCAAG
Microexon Amino Acid seq AFGQQG
Microexon-tag DNA Seq ATTTATGGGCTTTGTGACATTGACTTGAAAGATTTCAGCTTGCAAGCTTTTGGACAGCAAGGCTGTCTACTTCGGAGCTTACCTACAGATATTGTGTTTGACAACACT
Microexon-tag Amino Acid Seq IYGLCDIDLKDFSLQAFGQQGCLLRSLPTDIVFDNT
Microexon-tag spanning region60377622-60377921
Microexon-tag prediction score0.9849
Overlapped with the annotated transcript (%) 100
New Transcript ID EER92023x
Reference Transcript ID EER92023
Gene ID SORBI_3001G315400
Gene Name NA
Transcript ID EER92023
Protein ID
Gene ID SORBI_3001G315400
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >EER92023
MESSSSGSCGQGTLYHWLVLFAVWLCGTQHVLSQKTTLEPKDKFLLSDPPIGLFDPIEISPSVLPHNPNPVEPLSPMYPN
YTSYDPVLTGKCHVNFSALSYVMEKTAYDCSIPLAPLVADVICCPQVNSLMNIFQAAYGSGNNTLVLNQASANACFSDIV
NILASKGANTNIPELCTLRPSNLTDASCPVKDVSSFEKIVNTSKLLDACSSVDPLKECCRPVCQPAIAEAAIHISSGGAN
TFGSSSMPGSAVGIDVVSDCKGVVHSWLSMKLSSEEANSAFRVLSGCKVNKVCPLEFDEPSSVVKACGKASSSTPSCCAA
LHSYIGTRQKQIFVTNLQAINCATKFGSMLQKAGVVDDIYGLCDIDLKDFSLQAFGQQGCLLRSLPTDIVFDNTTGISFT
CDLSDNIAAPWPSSSSVQSLSLCAPEMSLPALPVSPKSESSGPSRTGIGVLLPLVFLTTTITI*
CDS seq >EER92023
ATGGAGAGTTCCAGTTCTGGTTCTTGTGGCCAGGGTACATTGTATCACTGGCTTGTGCTGTTTGCAGTTTGGCTTTGTGG
CACCCAGCATGTTCTGTCTCAGAAAACAACACTTGAACCAAAAGATAAATTCCTTCTGTCTGATCCACCTATTGGCCTCT
TTGATCCCATAGAGATTTCACCATCTGTTCTTCCACACAATCCTAACCCTGTTGAGCCACTGTCACCTATGTATCCAAAT
TACACATCCTATGATCCAGTCTTGACTGGAAAATGCCATGTAAATTTTTCTGCACTCTCTTATGTCATGGAGAAGACAGC
ATATGATTGCTCCATTCCTTTAGCACCACTAGTTGCTGATGTTATATGTTGCCCCCAAGTTAATAGCTTGATGAATATTT
TCCAAGCTGCATATGGCAGTGGAAACAATACCCTAGTTCTCAACCAGGCTTCAGCAAATGCTTGTTTCTCTGACATTGTG
AACATCCTTGCAAGCAAAGGGGCAAACACCAACATCCCTGAGTTATGTACTCTGAGGCCATCAAATCTTACTGATGCTTC
TTGTCCTGTGAAGGATGTTAGCTCCTTTGAGAAAATAGTCAACACCAGTAAACTCCTAGATGCATGCAGCAGTGTTGACC
CACTGAAAGAGTGTTGTAGGCCAGTTTGCCAACCTGCTATAGCAGAAGCAGCTATTCACATATCTTCAGGTGGAGCTAAC
ACGTTTGGAAGTTCTAGCATGCCAGGGAGCGCTGTTGGGATTGATGTTGTTAGTGACTGTAAAGGGGTAGTTCACTCCTG
GTTATCTATGAAGCTTTCATCAGAGGAAGCTAATAGTGCTTTCAGAGTATTATCTGGTTGTAAGGTGAACAAAGTTTGTC
CATTGGAGTTTGATGAACCTTCCTCAGTCGTTAAGGCATGTGGCAAGGCATCATCTTCAACGCCTTCATGCTGCGCAGCA
TTGCACTCTTACATCGGAACTAGGCAGAAACAGATATTTGTCACAAACCTGCAAGCAATTAATTGCGCAACAAAGTTTGG
ATCAATGCTACAGAAAGCTGGTGTGGTGGATGATATTTATGGGCTTTGTGACATTGACTTGAAAGATTTCAGCTTGCAAG
CTTTTGGACAGCAAGGCTGTCTACTTCGGAGCTTACCTACAGATATTGTGTTTGACAACACTACTGGCATTAGCTTTACA
TGCGATTTGAGTGACAATATTGCAGCACCATGGCCCTCCTCATCTTCTGTCCAATCATTGTCACTTTGTGCTCCAGAAAT
GTCGCTGCCTGCTTTGCCTGTCTCACCGAAATCAGAAAGCTCAGGGCCCTCCAGAACTGGGATTGGTGTTTTGTTGCCGC
TTGTATTCCTCACGACGACCATCACTATCTGA
Sb_1:60377766-60377780:+ does not have available information here.