
Microexon ID | Sb_1:60377766-60377780:+ |
Species | Sorghum Bicolor | Coordinates | 1:60377766..60377780 |
Microexon Cluster ID | MEP44 |
Size | 15 |
Phase | 1 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,15,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CTTTTGGACAGCAAG |
Microexon Amino Acid seq | AFGQQG |
Microexon-tag DNA Seq | ATTTATGGGCTTTGTGACATTGACTTGAAAGATTTCAGCTTGCAAGCTTTTGGACAGCAAGGCTGTCTACTTCGGAGCTTACCTACAGATATTGTGTTTGACAACACT |
Microexon-tag Amino Acid Seq | IYGLCDIDLKDFSLQAFGQQGCLLRSLPTDIVFDNT |
Microexon-tag spanning region | 60377622-60377921 |
Microexon-tag prediction score | 0.9849 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EER92023x |
Reference Transcript ID | EER92023 |
Gene ID | SORBI_3001G315400 |
Gene Name | NA |
Transcript ID | EER92023 |
Protein ID | |
Gene ID | SORBI_3001G315400 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >EER92023 MESSSSGSCGQGTLYHWLVLFAVWLCGTQHVLSQKTTLEPKDKFLLSDPPIGLFDPIEISPSVLPHNPNPVEPLSPMYPN YTSYDPVLTGKCHVNFSALSYVMEKTAYDCSIPLAPLVADVICCPQVNSLMNIFQAAYGSGNNTLVLNQASANACFSDIV NILASKGANTNIPELCTLRPSNLTDASCPVKDVSSFEKIVNTSKLLDACSSVDPLKECCRPVCQPAIAEAAIHISSGGAN TFGSSSMPGSAVGIDVVSDCKGVVHSWLSMKLSSEEANSAFRVLSGCKVNKVCPLEFDEPSSVVKACGKASSSTPSCCAA LHSYIGTRQKQIFVTNLQAINCATKFGSMLQKAGVVDDIYGLCDIDLKDFSLQAFGQQGCLLRSLPTDIVFDNTTGISFT CDLSDNIAAPWPSSSSVQSLSLCAPEMSLPALPVSPKSESSGPSRTGIGVLLPLVFLTTTITI* |
CDS seq | >EER92023 ATGGAGAGTTCCAGTTCTGGTTCTTGTGGCCAGGGTACATTGTATCACTGGCTTGTGCTGTTTGCAGTTTGGCTTTGTGG CACCCAGCATGTTCTGTCTCAGAAAACAACACTTGAACCAAAAGATAAATTCCTTCTGTCTGATCCACCTATTGGCCTCT TTGATCCCATAGAGATTTCACCATCTGTTCTTCCACACAATCCTAACCCTGTTGAGCCACTGTCACCTATGTATCCAAAT TACACATCCTATGATCCAGTCTTGACTGGAAAATGCCATGTAAATTTTTCTGCACTCTCTTATGTCATGGAGAAGACAGC ATATGATTGCTCCATTCCTTTAGCACCACTAGTTGCTGATGTTATATGTTGCCCCCAAGTTAATAGCTTGATGAATATTT TCCAAGCTGCATATGGCAGTGGAAACAATACCCTAGTTCTCAACCAGGCTTCAGCAAATGCTTGTTTCTCTGACATTGTG AACATCCTTGCAAGCAAAGGGGCAAACACCAACATCCCTGAGTTATGTACTCTGAGGCCATCAAATCTTACTGATGCTTC TTGTCCTGTGAAGGATGTTAGCTCCTTTGAGAAAATAGTCAACACCAGTAAACTCCTAGATGCATGCAGCAGTGTTGACC CACTGAAAGAGTGTTGTAGGCCAGTTTGCCAACCTGCTATAGCAGAAGCAGCTATTCACATATCTTCAGGTGGAGCTAAC ACGTTTGGAAGTTCTAGCATGCCAGGGAGCGCTGTTGGGATTGATGTTGTTAGTGACTGTAAAGGGGTAGTTCACTCCTG GTTATCTATGAAGCTTTCATCAGAGGAAGCTAATAGTGCTTTCAGAGTATTATCTGGTTGTAAGGTGAACAAAGTTTGTC CATTGGAGTTTGATGAACCTTCCTCAGTCGTTAAGGCATGTGGCAAGGCATCATCTTCAACGCCTTCATGCTGCGCAGCA TTGCACTCTTACATCGGAACTAGGCAGAAACAGATATTTGTCACAAACCTGCAAGCAATTAATTGCGCAACAAAGTTTGG ATCAATGCTACAGAAAGCTGGTGTGGTGGATGATATTTATGGGCTTTGTGACATTGACTTGAAAGATTTCAGCTTGCAAG CTTTTGGACAGCAAGGCTGTCTACTTCGGAGCTTACCTACAGATATTGTGTTTGACAACACTACTGGCATTAGCTTTACA TGCGATTTGAGTGACAATATTGCAGCACCATGGCCCTCCTCATCTTCTGTCCAATCATTGTCACTTTGTGCTCCAGAAAT GTCGCTGCCTGCTTTGCCTGTCTCACCGAAATCAGAAAGCTCAGGGCCCTCCAGAACTGGGATTGGTGTTTTGTTGCCGC TTGTATTCCTCACGACGACCATCACTATCTGA |
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