Microexon ID Pt_7:14668140-14668154:-
Species Populus   Trichocarpa
Coordinates 7:14668140..14668154
Microexon Cluster ID MEP44
Size 15
Phase 1
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,15,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq CATACAGACAACAAG
Microexon Amino Acid seq AYRQQG
Microexon-tag DNA Seq GTGTATGAGCTTTGTGACATTGACTTAAAAGATTTTAGCATCCAAGCATACAGACAACAAGGGTGTCTACTTCGTAGCTTGCCTCCCGATGTTATATTGGACAATTCA
Microexon-tag Amino Acid Seq VYELCDIDLKDFSIQAYRQQGCLLRSLPPDVILDNS
Microexon-tag spanning region14667590-14668326
Microexon-tag prediction score0.9432
Overlapped with the annotated transcript (%) 100
New Transcript ID Potri.007G133800.3.v4.1x
Reference Transcript ID Potri.007G133800.3.v4.1
Gene ID Potri.007G133800.v4.1
Gene Name NA
Transcript ID Potri.007G133800.3.v4.1
Protein ID
Gene ID Potri.007G133800.v4.1
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Potri.007G133800.3.v4.1
MDCFQTICCLKGSLGHQFLLFIVWLSSFQVAVALQTLLEPSHVSSTSELATPPNFGIFGPIEISPAILPRNPYPDESLAP
MYPTFPTTYKPNLTGKCPVNFTALSNIIDKTASDCSQPLAALVGNVICCPQLGSLLHIFQGYYSVNSDKLVLQNAVADDC
FSDIISILASRGANKTIPTLCSVKSLNLTGGLCPVKDVVNFEKIVNTSKLLEACSTVDPLKECCRPICQSAITEAALEMS
RTQLTTNDNEELVSEHNRNDPLSDCKGVVYSYLSRKLSADAANAAFRTVSACKVNKVCPLNFTRPLEVIKACRNVAAPSP
SCCSSLNTYMAGIQNQMLITNKQAIICATVLGSKLRQGGVMTNVYELCDIDLKDFSIQAYRQQGCLLRSLPPDVILDNST
GFSFTCDLNDNIAAPWPSSSSISTLSLCAPEMSLPALPTSQIKNPGNRGGELELLVPIFSFFIFSALLY*
CDS seq >Potri.007G133800.3.v4.1
ATGGACTGTTTCCAGACTATTTGTTGTCTAAAGGGCTCACTAGGCCATCAGTTCTTGTTATTTATCGTTTGGTTATCCAG
TTTCCAAGTTGCTGTGGCATTGCAGACCCTTCTGGAGCCCAGTCATGTTTCTTCTACATCTGAGCTAGCAACTCCACCAA
ATTTTGGAATTTTTGGTCCTATTGAAATATCACCTGCCATTCTCCCACGTAACCCTTATCCTGATGAATCTTTGGCTCCT
ATGTACCCAACTTTTCCCACCACGTACAAGCCAAATTTAACTGGCAAATGCCCTGTAAATTTCACCGCTTTGTCAAATAT
CATAGACAAAACAGCATCTGATTGCTCTCAACCCTTGGCAGCTCTTGTAGGAAATGTAATATGCTGTCCGCAGCTTGGCA
GTTTGCTCCACATCTTCCAGGGTTATTACAGTGTCAACTCTGATAAGTTGGTTTTGCAGAATGCAGTTGCTGATGATTGT
TTTTCAGATATCATTAGTATACTAGCCAGCAGAGGGGCCAATAAAACTATACCTACACTATGCTCTGTTAAATCATTAAA
TCTTACTGGTGGGTTGTGTCCAGTAAAGGATGTTGTCAACTTTGAGAAAATAGTAAATACAAGCAAATTACTGGAAGCCT
GCAGTACCGTCGATCCTCTGAAAGAGTGCTGTAGACCAATTTGCCAATCTGCAATCACTGAAGCTGCTCTTGAGATGTCT
AGGACACAATTGACAACCAATGATAATGAAGAGTTAGTGAGCGAGCATAATCGTAATGATCCTCTTAGTGATTGTAAAGG
GGTGGTGTATTCATATCTCTCTAGGAAACTATCAGCAGATGCTGCAAATGCTGCATTCCGGACAGTATCTGCCTGCAAAG
TTAACAAGGTTTGCCCTTTGAATTTCACACGGCCTCTAGAAGTTATCAAAGCATGTCGAAATGTAGCTGCTCCCAGTCCC
TCCTGCTGTAGCTCATTAAATACATACATGGCTGGGATACAAAATCAAATGTTAATTACAAACAAACAGGCCATAATTTG
TGCAACAGTTTTGGGGTCCAAGCTACGACAAGGTGGGGTCATGACAAATGTGTATGAGCTTTGTGACATTGACTTAAAAG
ATTTTAGCATCCAAGCATACAGACAACAAGGGTGTCTACTTCGTAGCTTGCCTCCCGATGTTATATTGGACAATTCAACA
GGGTTCAGCTTTACATGCGACTTGAATGACAACATTGCAGCTCCATGGCCTTCATCATCCTCCATTTCAACCTTGTCTCT
TTGTGCCCCAGAGATGTCCTTGCCTGCCTTGCCAACATCACAGATCAAAAACCCTGGCAATCGTGGTGGTGAGTTGGAGT
TGCTGGTGCCCATTTTTTCATTTTTTATTTTCAGTGCATTGTTGTACTGA
Pt_7:14668140-14668154:- does not have available information here.