
Microexon ID | Pt_7:14668140-14668154:- |
Species | Populus Trichocarpa | Coordinates | 7:14668140..14668154 |
Microexon Cluster ID | MEP44 |
Size | 15 |
Phase | 1 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,15,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CATACAGACAACAAG |
Microexon Amino Acid seq | AYRQQG |
Microexon-tag DNA Seq | GTGTATGAGCTTTGTGACATTGACTTAAAAGATTTTAGCATCCAAGCATACAGACAACAAGGGTGTCTACTTCGTAGCTTGCCTCCCGATGTTATATTGGACAATTCA |
Microexon-tag Amino Acid Seq | VYELCDIDLKDFSIQAYRQQGCLLRSLPPDVILDNS |
Microexon-tag spanning region | 14667590-14668326 |
Microexon-tag prediction score | 0.9432 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Potri.007G133800.3.v4.1x |
Reference Transcript ID | Potri.007G133800.3.v4.1 |
Gene ID | Potri.007G133800.v4.1 |
Gene Name | NA |
Transcript ID | Potri.007G133800.3.v4.1 |
Protein ID | |
Gene ID | Potri.007G133800.v4.1 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Potri.007G133800.3.v4.1 MDCFQTICCLKGSLGHQFLLFIVWLSSFQVAVALQTLLEPSHVSSTSELATPPNFGIFGPIEISPAILPRNPYPDESLAP MYPTFPTTYKPNLTGKCPVNFTALSNIIDKTASDCSQPLAALVGNVICCPQLGSLLHIFQGYYSVNSDKLVLQNAVADDC FSDIISILASRGANKTIPTLCSVKSLNLTGGLCPVKDVVNFEKIVNTSKLLEACSTVDPLKECCRPICQSAITEAALEMS RTQLTTNDNEELVSEHNRNDPLSDCKGVVYSYLSRKLSADAANAAFRTVSACKVNKVCPLNFTRPLEVIKACRNVAAPSP SCCSSLNTYMAGIQNQMLITNKQAIICATVLGSKLRQGGVMTNVYELCDIDLKDFSIQAYRQQGCLLRSLPPDVILDNST GFSFTCDLNDNIAAPWPSSSSISTLSLCAPEMSLPALPTSQIKNPGNRGGELELLVPIFSFFIFSALLY* |
CDS seq | >Potri.007G133800.3.v4.1 ATGGACTGTTTCCAGACTATTTGTTGTCTAAAGGGCTCACTAGGCCATCAGTTCTTGTTATTTATCGTTTGGTTATCCAG TTTCCAAGTTGCTGTGGCATTGCAGACCCTTCTGGAGCCCAGTCATGTTTCTTCTACATCTGAGCTAGCAACTCCACCAA ATTTTGGAATTTTTGGTCCTATTGAAATATCACCTGCCATTCTCCCACGTAACCCTTATCCTGATGAATCTTTGGCTCCT ATGTACCCAACTTTTCCCACCACGTACAAGCCAAATTTAACTGGCAAATGCCCTGTAAATTTCACCGCTTTGTCAAATAT CATAGACAAAACAGCATCTGATTGCTCTCAACCCTTGGCAGCTCTTGTAGGAAATGTAATATGCTGTCCGCAGCTTGGCA GTTTGCTCCACATCTTCCAGGGTTATTACAGTGTCAACTCTGATAAGTTGGTTTTGCAGAATGCAGTTGCTGATGATTGT TTTTCAGATATCATTAGTATACTAGCCAGCAGAGGGGCCAATAAAACTATACCTACACTATGCTCTGTTAAATCATTAAA TCTTACTGGTGGGTTGTGTCCAGTAAAGGATGTTGTCAACTTTGAGAAAATAGTAAATACAAGCAAATTACTGGAAGCCT GCAGTACCGTCGATCCTCTGAAAGAGTGCTGTAGACCAATTTGCCAATCTGCAATCACTGAAGCTGCTCTTGAGATGTCT AGGACACAATTGACAACCAATGATAATGAAGAGTTAGTGAGCGAGCATAATCGTAATGATCCTCTTAGTGATTGTAAAGG GGTGGTGTATTCATATCTCTCTAGGAAACTATCAGCAGATGCTGCAAATGCTGCATTCCGGACAGTATCTGCCTGCAAAG TTAACAAGGTTTGCCCTTTGAATTTCACACGGCCTCTAGAAGTTATCAAAGCATGTCGAAATGTAGCTGCTCCCAGTCCC TCCTGCTGTAGCTCATTAAATACATACATGGCTGGGATACAAAATCAAATGTTAATTACAAACAAACAGGCCATAATTTG TGCAACAGTTTTGGGGTCCAAGCTACGACAAGGTGGGGTCATGACAAATGTGTATGAGCTTTGTGACATTGACTTAAAAG ATTTTAGCATCCAAGCATACAGACAACAAGGGTGTCTACTTCGTAGCTTGCCTCCCGATGTTATATTGGACAATTCAACA GGGTTCAGCTTTACATGCGACTTGAATGACAACATTGCAGCTCCATGGCCTTCATCATCCTCCATTTCAACCTTGTCTCT TTGTGCCCCAGAGATGTCCTTGCCTGCCTTGCCAACATCACAGATCAAAAACCCTGGCAATCGTGGTGGTGAGTTGGAGT TGCTGGTGCCCATTTTTTCATTTTTTATTTTCAGTGCATTGTTGTACTGA |
Pt_7:14668140-14668154:- does not have available information here.