Microexon ID Pt_7:14654556-14654570:-
Species Populus   Trichocarpa
Coordinates 7:14654556..14654570
Microexon Cluster ID MEP44
Size 15
Phase 1
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,15,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq CATACAGACAACAAG
Microexon Amino Acid seq AYRQQG
Microexon-tag DNA Seq GTGTATGAGCTTTGTGACATTGACTTAAAAGATTTTAGCATCCAAGCATACAGACAACAAGGGTGTCTACTTCGTAGCTTGCCTCCCGATGTTATATTGGACAATTCA
Microexon-tag Amino Acid Seq VYELCDIDLKDFSIQAYRQQGCLLRSLPPDVILDNS
Microexon-tag spanning region14654007-14654742
Microexon-tag prediction score0.9432
Overlapped with the annotated transcript (%) 100
New Transcript ID Potri.007G133733.1.v4.1x
Reference Transcript ID Potri.007G133733.1.v4.1
Gene ID Potri.007G133733.v4.1
Gene Name NA
Transcript ID Potri.007G133733.1.v4.1
Protein ID
Gene ID Potri.007G133733.v4.1
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Potri.007G133733.1.v4.1
MSRTQLTTNDNEELVSEHNRNDPLSDCKGVVYSYLSRKLSADAANAAFRTVSACKVNKVCPLNFTRPLEVIKACRNVAAP
SPSCCSSLNTYMAGIQNQMLITNKQAIICATVLGSKLRQGGVMTNVYELCDIDLKDFSIQAYRQQGCLLRSLPPDVILDN
STGFSFTCDLNDNIAAPWPSSSSISTLSLCAPEMSLPALPTSQIKNPGNRGGELELLVPIFSFFIFSALLY*
CDS seq >Potri.007G133733.1.v4.1
ATGTCTAGGACACAATTGACAACCAATGATAATGAAGAGTTAGTGAGCGAGCATAATCGTAATGATCCTCTTAGTGATTG
TAAAGGGGTGGTGTATTCATATCTCTCTAGGAAACTATCAGCAGATGCTGCAAATGCTGCATTCCGGACAGTATCTGCCT
GCAAAGTTAACAAGGTTTGCCCTTTGAATTTCACACGGCCTCTAGAAGTTATCAAAGCATGTCGAAATGTAGCTGCTCCC
AGTCCCTCCTGCTGTAGCTCATTAAATACATACATGGCTGGGATACAAAATCAAATGTTAATTACAAACAAACAGGCCAT
AATTTGTGCAACAGTTTTGGGGTCCAAGCTACGACAAGGTGGGGTCATGACAAATGTGTATGAGCTTTGTGACATTGACT
TAAAAGATTTTAGCATCCAAGCATACAGACAACAAGGGTGTCTACTTCGTAGCTTGCCTCCCGATGTTATATTGGACAAT
TCAACAGGGTTCAGCTTTACATGCGACTTGAATGACAACATTGCAGCTCCATGGCCTTCATCATCCTCCATTTCAACCTT
GTCTCTTTGTGCCCCAGAGATGTCCTTGCCTGCCTTGCCAACATCACAGATCAAAAACCCTGGCAATCGTGGTGGTGAGT
TGGAGTTGCTGGTGCCCATTTTTTCATTTTTTATTTTCAGTGCATTGTTGTACTGA
Pt_7:14654556-14654570:- does not have available information here.