
Microexon ID | Pt_7:14654556-14654570:- |
Species | Populus Trichocarpa | Coordinates | 7:14654556..14654570 |
Microexon Cluster ID | MEP44 |
Size | 15 |
Phase | 1 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,15,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CATACAGACAACAAG |
Microexon Amino Acid seq | AYRQQG |
Microexon-tag DNA Seq | GTGTATGAGCTTTGTGACATTGACTTAAAAGATTTTAGCATCCAAGCATACAGACAACAAGGGTGTCTACTTCGTAGCTTGCCTCCCGATGTTATATTGGACAATTCA |
Microexon-tag Amino Acid Seq | VYELCDIDLKDFSIQAYRQQGCLLRSLPPDVILDNS |
Microexon-tag spanning region | 14654007-14654742 |
Microexon-tag prediction score | 0.9432 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Potri.007G133733.1.v4.1x |
Reference Transcript ID | Potri.007G133733.1.v4.1 |
Gene ID | Potri.007G133733.v4.1 |
Gene Name | NA |
Transcript ID | Potri.007G133733.1.v4.1 |
Protein ID | |
Gene ID | Potri.007G133733.v4.1 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Potri.007G133733.1.v4.1 MSRTQLTTNDNEELVSEHNRNDPLSDCKGVVYSYLSRKLSADAANAAFRTVSACKVNKVCPLNFTRPLEVIKACRNVAAP SPSCCSSLNTYMAGIQNQMLITNKQAIICATVLGSKLRQGGVMTNVYELCDIDLKDFSIQAYRQQGCLLRSLPPDVILDN STGFSFTCDLNDNIAAPWPSSSSISTLSLCAPEMSLPALPTSQIKNPGNRGGELELLVPIFSFFIFSALLY* |
CDS seq | >Potri.007G133733.1.v4.1 ATGTCTAGGACACAATTGACAACCAATGATAATGAAGAGTTAGTGAGCGAGCATAATCGTAATGATCCTCTTAGTGATTG TAAAGGGGTGGTGTATTCATATCTCTCTAGGAAACTATCAGCAGATGCTGCAAATGCTGCATTCCGGACAGTATCTGCCT GCAAAGTTAACAAGGTTTGCCCTTTGAATTTCACACGGCCTCTAGAAGTTATCAAAGCATGTCGAAATGTAGCTGCTCCC AGTCCCTCCTGCTGTAGCTCATTAAATACATACATGGCTGGGATACAAAATCAAATGTTAATTACAAACAAACAGGCCAT AATTTGTGCAACAGTTTTGGGGTCCAAGCTACGACAAGGTGGGGTCATGACAAATGTGTATGAGCTTTGTGACATTGACT TAAAAGATTTTAGCATCCAAGCATACAGACAACAAGGGTGTCTACTTCGTAGCTTGCCTCCCGATGTTATATTGGACAAT TCAACAGGGTTCAGCTTTACATGCGACTTGAATGACAACATTGCAGCTCCATGGCCTTCATCATCCTCCATTTCAACCTT GTCTCTTTGTGCCCCAGAGATGTCCTTGCCTGCCTTGCCAACATCACAGATCAAAAACCCTGGCAATCGTGGTGGTGAGT TGGAGTTGCTGGTGCCCATTTTTTCATTTTTTATTTTCAGTGCATTGTTGTACTGA |
Pt_7:14654556-14654570:- does not have available information here.