| Microexon ID | Pt_17:1320281-1320295:+ |
| Species | Populus Trichocarpa | Coordinates | 17:1320281..1320295 |
| Microexon Cluster ID | MEP44 |
| Size | 15 |
| Phase | 1 |
| Pfam Domain Motif | Unknown |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,15,47 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | CATATGGACAACAAG |
| Microexon Amino Acid seq | AYGQQG |
| Microexon-tag DNA Seq | GTTTATGAGCTTTGTGACATTGACTTGAAAGATTTTAGCATACAAGCATATGGACAACAAGGGTGTCTACTTCGAAGCTTGCCTGCCGATGTTATATTAGACAATTCG |
| Microexon-tag Amino Acid Seq | VYELCDIDLKDFSIQAYGQQGCLLRSLPADVILDNS |
| Microexon-tag spanning region | 1320117-1320775 |
| Microexon-tag prediction score | 0.9717 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.017G018000.2.v4.1x |
| Reference Transcript ID | Potri.017G018000.2.v4.1 |
| Gene ID | Potri.017G018000.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.017G018000.2.v4.1 |
| Protein ID | |
| Gene ID | Potri.017G018000.v4.1 |
| Gene Name | |
| Pfam domain motif | Unknown |
| Motif E-value | NA |
| Motif start | NA |
| Motif end | NA |
| Protein seq | >Potri.017G018000.2.v4.1 MEGFQTISCLKGSLGHQFLLFIVWLSSFQVAVALQTLLEPNHVSSTSELGTPPISGLFGPIEISPSVFPRYPYPGENLAP MYPTFPTTYEPNLTGKCPVNFTAMSNVIDRTASDCSQPLAALVGNVICCPQLGSLLHIFQGYFSGNSDKLVLQNAVADDC FSDIISILASRGANITIPTLCSVKSLNLTGGLCPVKDVANFEKIVNTSKLLEACSTVDPLKECCRPICQSAIIEAALEIS GTQLTINDNRDLVTVPHHNDPLSDCKGVVFSYISRKLSADAANSAFRILSACKVNKACPLNFTQPLEVIKACRNLAAPNP SCCSSLNTYIAGIQNQMLITNKQAIICATVLGSKLRQGGVMTNVYELCDIDLKDFSIQAYGQQGCLLRSLPADVILDNST GFSFTCDLTDNIAAPWPSSSSVSSVSLCAPEMSLPALPTSQIRNPGNRGGELELLVPIFSFFIFSALLY* |
| CDS seq | >Potri.017G018000.2.v4.1 ATGGAGGGTTTCCAGACTATCAGTTGTCTAAAGGGTTCACTAGGCCATCAGTTCTTGTTATTTATTGTTTGGTTATCCAG TTTCCAAGTAGCTGTGGCACTGCAGACCCTGCTTGAGCCTAATCATGTTTCGTCTACATCTGAGCTGGGCACTCCACCTA TTTCTGGACTTTTTGGACCCATTGAAATATCACCTTCTGTCTTCCCACGCTACCCTTATCCTGGTGAGAATTTAGCTCCT ATGTACCCAACTTTCCCCACCACATATGAGCCAAATTTAACCGGGAAATGCCCTGTAAATTTCACTGCTATGTCAAATGT CATAGACAGAACCGCATCTGATTGCTCTCAACCCTTGGCAGCTCTTGTAGGAAATGTAATATGCTGTCCACAGCTTGGTA GTTTGCTCCACATTTTCCAGGGCTATTTCAGTGGCAACTCTGATAAGTTGGTTTTGCAGAATGCAGTGGCTGATGATTGT TTTTCAGATATCATTAGTATACTAGCAAGCAGAGGGGCCAATATCACTATACCTACACTTTGCTCTGTTAAATCGTTAAA TCTTACTGGTGGGTTGTGTCCTGTGAAGGATGTTGCTAACTTTGAGAAAATAGTAAATACAAGCAAATTACTGGAAGCCT GCAGTACTGTCGATCCTCTTAAAGAGTGTTGTAGACCAATTTGCCAATCTGCAATCATAGAAGCTGCTCTTGAGATTTCT GGGACACAATTGACAATCAATGATAATAGAGATTTGGTGACCGTGCCTCATCATAATGATCCTCTTAGTGATTGCAAAGG GGTGGTATTTTCATATATCTCTAGGAAGCTATCAGCAGATGCTGCAAATAGTGCATTCCGGATATTATCTGCCTGCAAAG TTAACAAGGCTTGTCCTTTGAATTTCACACAGCCATTAGAAGTTATTAAAGCATGTCGAAATTTAGCTGCTCCCAATCCC TCCTGCTGTAGCTCATTAAATACATACATTGCTGGGATACAAAATCAAATGTTAATTACAAACAAACAGGCGATAATCTG TGCAACAGTTTTGGGGTCCAAGCTACGACAAGGCGGGGTCATGACAAATGTTTATGAGCTTTGTGACATTGACTTGAAAG ATTTTAGCATACAAGCATATGGACAACAAGGGTGTCTACTTCGAAGCTTGCCTGCCGATGTTATATTAGACAATTCGACA GGGTTCAGCTTTACATGTGACTTGACCGACAACATTGCAGCTCCATGGCCATCATCATCCTCCGTGTCATCCGTGTCTCT TTGTGCCCCAGAGATGTCCTTGCCTGCCTTGCCTACATCACAGATCAGAAACCCTGGCAATCGTGGTGGTGAGTTGGAGC TGCTGGTACCCATTTTTTCATTTTTTATTTTCAGTGCATTGTTGTACTGA |
Pt_17:1320281-1320295:+ does not have available information here.