Microexon ID Pp_13:633025-633039:+
Species Physcomitrium patens
Coordinates 13:633025..633039
Microexon Cluster ID MEP44
Size 15
Phase 1
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,15,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RTTTATGRGCTTTGTGATRTTGACTTGAAAGATTTYAGYMTBCAAGCWTWTGGRCARCAAGGBTGTYTACTTCGRAGCTTRCCTRCAGATRTKGTRTTTGACAAYWCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAGTTGGTGGACAAG
Microexon Amino Acid seq GVGGQG
Microexon-tag DNA Seq ATTTACTCCCTGTGTGGAATCGACCTTAAGGATTTCTCTCTTCAAGGAGTTGGTGGACAAGGTTGTTTACTTTCAAGTTTACCTTCCGACATTATGAGCAACGTTACA
Microexon-tag Amino Acid Seq IYSLCGIDLKDFSLQGVGGQGCLLSSLPSDIMSNVT
Microexon-tag spanning region632526-633325
Microexon-tag prediction score0.8414
Overlapped with the annotated transcript (%) 100
New Transcript ID Pp3c13_1140V3.1x
Reference Transcript ID Pp3c13_1140V3.1
Gene ID Pp3c13_1140
Gene Name NA
Transcript ID Pp3c13_1140V3.1
Protein ID Pp3c13_1140V3.1
Gene ID Pp3c13_1140
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Pp3c13_1140V3.1
MKGMKGWRSGLRRPQMSTLLLLYVGLLCQLRGTFSIGHQHGNPIEVGQQLIQDSSPTPSKLPTPSPPTFDTPTPFPTASP
PVQASSGIFPFMAPPPLEIPVITNPSTPELSGFCPFDFSTLEGTLIRTAGDCPAPLALYVGSVICCPQLESLFQVSLGQY
SLDSGNLGLNVTEAEYCFSDTQNLMASLGANTSLGDLCAAQPANLTSGLCPVTKVSQLEEMINTTKLLDACHSVDPLKEC
TEEPTCQSQVMDVATQMAGQLVGDPGQLNGSAVPPGEQQVVVDCKNMVLAWLASKLGPDAANTMLRNLISCRVNKECPLE
FRDPMPVAKACGCSSTPSIATCCRAIDGYLLEVQQQMLITNLQALRCVTFLASMLQNMSVFADIYSLCGIDLKDFSLQGV
GGQGCLLSSLPSDIMSNVTGIDFTCDLNDNIAAPWVQTLKTDAAYSVCGRPPVALPAIPESSTASWSIDFRRRNFLIMAL
CVVFIISKL*
CDS seq >Pp3c13_1140V3.1
ATGAAGGGGATGAAGGGTTGGCGATCTGGGCTTAGGAGGCCTCAGATGTCCACTCTGCTTCTTCTCTACGTGGGGCTACT
ATGTCAGTTGCGAGGCACATTCTCTATAGGTCATCAACATGGCAACCCAATCGAGGTCGGCCAGCAACTCATTCAGGATT
CGTCTCCCACTCCCTCAAAGTTGCCTACTCCCTCTCCTCCAACTTTCGACACTCCAACACCTTTTCCAACTGCGTCACCT
CCCGTACAAGCTTCGTCAGGAATTTTTCCATTCATGGCTCCCCCTCCACTGGAGATTCCAGTCATTACCAATCCATCTAC
GCCTGAACTATCAGGTTTCTGTCCTTTTGATTTTTCAACGTTAGAAGGGACTCTTATTCGAACTGCTGGAGATTGTCCAG
CCCCTCTAGCACTCTACGTTGGAAGTGTCATCTGTTGCCCACAACTTGAGAGCCTTTTTCAAGTCTCTTTGGGTCAATAC
AGCCTAGACTCGGGCAATCTTGGGCTGAACGTTACAGAAGCTGAATACTGCTTTTCGGACACCCAAAATCTTATGGCTAG
TTTGGGAGCCAACACATCCTTAGGGGATCTTTGTGCTGCTCAACCTGCCAATCTTACCAGTGGTTTATGTCCAGTTACCA
AGGTTAGCCAACTGGAAGAGATGATAAATACTACTAAGTTATTGGATGCATGCCATTCGGTGGACCCTTTAAAGGAGTGC
ACCGAAGAACCTACTTGTCAATCTCAGGTCATGGACGTAGCCACTCAAATGGCTGGGCAGCTTGTGGGTGATCCAGGTCA
ATTGAATGGCAGTGCTGTACCACCAGGTGAACAGCAGGTGGTGGTTGATTGCAAAAACATGGTCCTTGCATGGTTGGCAA
GTAAGCTGGGTCCAGATGCAGCGAACACCATGCTGCGTAACCTCATCAGCTGCCGTGTCAACAAAGAGTGTCCTCTGGAA
TTTAGAGATCCAATGCCTGTTGCCAAAGCATGTGGCTGCTCAAGTACGCCGTCCATTGCGACTTGTTGCAGAGCCATAGA
CGGATACTTGTTGGAGGTTCAGCAGCAGATGTTGATTACTAATTTGCAAGCGCTCCGCTGTGTGACATTCTTGGCTTCCA
TGCTTCAAAATATGTCTGTCTTTGCAGATATTTACTCCCTGTGTGGAATCGACCTTAAGGATTTCTCTCTTCAAGGAGTT
GGTGGACAAGGTTGTTTACTTTCAAGTTTACCTTCCGACATTATGAGCAACGTTACAGGCATCGACTTTACCTGCGATTT
AAACGATAATATAGCGGCTCCCTGGGTTCAAACTCTCAAGACTGATGCAGCATATTCTGTGTGTGGTCGACCTCCGGTTG
CTCTGCCAGCCATTCCAGAATCTTCAACGGCCTCTTGGTCAATCGATTTTCGAAGAAGGAACTTTCTCATTATGGCGTTG
TGTGTCGTATTTATCATATCCAAGCTGTAG
Microexon DNA seq GAGTTGGTGGACAAG
Microexon Amino Acid seq GVGGQG
Microexon-tag DNA Seq ATTTACTCCCTGTGTGGAATCGACCTTAAGGATTTCTCTCTTCAAGGAGTTGGTGGACAAGGTTGTTTACTTTCAAGTTTACCTTCCGACATTATGAGCAACGTTACA
Microexon-tag Amino Acid seq IYSLCGIDLKDFSLQGVGGQGCLLSSLPSDIMSNVT
Transcript ID Pp.4494.1
Gene ID Pp.4494
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Pp.4494.1
MKGMKGWRSGLRRPQMSTLLLLYVGLLCQLRGTFSIGHQHGNPIEVGQQLIQDSSPTPSKLPTPSPPTFDTPTPFPTASP
PVQASSGIFPFMAPPPLEIPVITNPSTPELSGFCPFDFSTLEGTLIRTAGDCPAPLALYVGSVICCPQLESLFQVSLGQY
SLDSGNLGLNVTEAEYCFSDTQNLMASLGANTSLGDLCAAQPANLTSGLCPVTKVSQLEEMINTTKLLDACHSVDPLKEC
TEEPTCQSQVMDVATQMAGQLVGDPGQLNGSAVPPGEQQVVVDCKNMVLAWLASKLGPDAANTMLRNLISCRVNKECPLE
FRDPMPVAKACGCSSTPSIATCCRAIDGYLLEVQQQMLITNLQALRCVTFLASMLQNMSVFADIYSLCGIDLKDFSLQGV
GGQGCLLSSLPSDIMSNVTGIDFTCDLNDNIAAPWVQTLKTDAAYSVCGRPPVALPAIPESSTASWSIDFRRRNFLIMAL
CVVFIISKL*
CDS seq >Pp.4494.1
ATGAAGGGGATGAAGGGTTGGCGATCTGGGCTTAGGAGGCCTCAGATGTCCACTCTGCTTCTTCTCTACGTGGGGCTACT
ATGTCAGTTGCGAGGCACATTCTCTATAGGTCATCAACATGGCAACCCAATCGAGGTCGGCCAGCAACTCATTCAGGATT
CGTCTCCCACTCCCTCAAAGTTGCCTACTCCCTCTCCTCCAACTTTCGACACTCCAACACCTTTTCCAACTGCGTCACCT
CCCGTACAAGCTTCGTCAGGAATTTTTCCATTCATGGCTCCCCCTCCACTGGAGATTCCAGTCATTACCAATCCATCTAC
GCCTGAACTATCAGGTTTCTGTCCTTTTGATTTTTCAACGTTAGAAGGGACTCTTATTCGAACTGCTGGAGATTGTCCAG
CCCCTCTAGCACTCTACGTTGGAAGTGTCATCTGTTGCCCACAACTTGAGAGCCTTTTTCAAGTCTCTTTGGGTCAATAC
AGCCTAGACTCGGGCAATCTTGGGCTGAACGTTACAGAAGCTGAATACTGCTTTTCGGACACCCAAAATCTTATGGCTAG
TTTGGGAGCCAACACATCCTTAGGGGATCTTTGTGCTGCTCAACCTGCCAATCTTACCAGTGGTTTATGTCCAGTTACCA
AGGTTAGCCAACTGGAAGAGATGATAAATACTACTAAGTTATTGGATGCATGCCATTCGGTGGACCCTTTAAAGGAGTGC
ACCGAAGAACCTACTTGTCAATCTCAGGTCATGGACGTAGCCACTCAAATGGCTGGGCAGCTTGTGGGTGATCCAGGTCA
ATTGAATGGCAGTGCTGTACCACCAGGTGAACAGCAGGTGGTGGTTGATTGCAAAAACATGGTCCTTGCATGGTTGGCAA
GTAAGCTGGGTCCAGATGCAGCGAACACCATGCTGCGTAACCTCATCAGCTGCCGTGTCAACAAAGAGTGTCCTCTGGAA
TTTAGAGATCCAATGCCTGTTGCCAAAGCATGTGGCTGCTCAAGTACGCCGTCCATTGCGACTTGTTGCAGAGCCATAGA
CGGATACTTGTTGGAGGTTCAGCAGCAGATGTTGATTACTAATTTGCAAGCGCTCCGCTGTGTGACATTCTTGGCTTCCA
TGCTTCAAAATATGTCTGTCTTTGCAGATATTTACTCCCTGTGTGGAATCGACCTTAAGGATTTCTCTCTTCAAGGAGTT
GGTGGACAAGGTTGTTTACTTTCAAGTTTACCTTCCGACATTATGAGCAACGTTACAGGCATCGACTTTACCTGCGATTT
AAACGATAATATAGCGGCTCCCTGGGTTCAAACTCTCAAGACTGATGCAGCATATTCTGTGTGTGGTCGACCTCCGGTTG
CTCTGCCAGCCATTCCAGAATCTTCAACGGCCTCTTGGTCAATCGATTTTCGAAGAAGGAACTTTCTCATTATGGCGTTG
TGTGTCGTATTTATCATATCCAAGCTGTAG