
Microexon ID | Vv_11:1660184-1660198:- |
Species | Vistis vinifera | Coordinates | 11:1660184..1660198 |
Microexon Cluster ID | MEP43 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GARCTTCTYAGWCTAGCWTCAACMGAARTACARMGACARTTYTWTCAGGARGCRAGGATTAAGACTGCTGTWTTCATGGGGTGYAACARWGGWGAAATTGARMTYGGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAGCTAGGATTAAG |
Microexon Amino Acid seq | EARIK |
Microexon-tag DNA Seq | CAGATCGGTAGGATGGCAACAGCCCCAGCACAAATGAAATTCTACCAGGAAGCTAGGATTAAGACTGCGGTATTCATGGGGTGCAGGAGCGGAGAGATTGAATTGGGC |
Microexon-tag Amino Acid Seq | QIGRMATAPAQMKFYQEARIKTAVFMGCRSGEIELG |
Microexon-tag spanning region | 1660045-1660354 |
Microexon-tag prediction score | 0.911 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_11s0016g02070.t01x |
Reference Transcript ID | VIT_11s0016g02070.t01 |
Gene ID | VIT_11s0016g02070 |
Gene Name | NA |
Transcript ID | VIT_11s0016g02070.t01 |
Protein ID | VIT_11s0016g02070.t01 |
Gene ID | VIT_11s0016g02070 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >VIT_11s0016g02070.t01 MDSTFLLDEATRTSFLRYVMESFGCSYICLWSYQPHPSSCLRFLDGCYHEENSNQPCSSSGSLARRLFNEYCNSVFILEN DISRVPGEAFKNCVSYMELNESQIGRMATAPAQMKFYQEARIKTAVFMGCRSGEIELGMSNPTMKNLEMETKNWFLEDFS QQFSPQFPQPADQNRQSSSSSRSMSMDSPEYPQALLFNIPNTSYIPEPLKEVSMEPALGPPSTTISTPHEQAMQALNQIR SLNFPSLESEHAAMTRAILAVISSSPPSSSSSSHHPPQHNYVSAFRNYKKPSTAQLTASSGRQSMLKRSMAYFKNLHLRR RQELIQGSHPSVSQLHHMISERKRREKLNESFHALRTLLPPGSKKDKASVLSGTREYLSSLKAQILELTQRNQALEAQIN LKNEGNNEGGGDSSNERLSVQITNASEPTPEERNIDLQVTVRADCSILDLVIRILDFLKRVKNVSLMSMNAETRMAETSP INHVILRLKIEASEWDQSAFEEAIRRVVADLAV* |
CDS seq | >VIT_11s0016g02070.t01 ATGGACTCTACCTTCCTGCTCGATGAAGCAACAAGGACGAGCTTTCTTCGGTATGTGATGGAGTCTTTTGGCTGCTCTTA CATTTGCCTTTGGTCATATCAACCGCACCCATCCAGCTGCTTGCGCTTCCTGGATGGGTGCTACCATGAAGAGAACAGCA ACCAACCCTGCTCCTCATCTGGGAGTCTAGCTAGGAGGCTTTTCAACGAATACTGTAATTCAGTATTCATCCTCGAAAAC GACATCAGCCGAGTTCCAGGGGAGGCGTTCAAGAATTGCGTGTCGTATATGGAGTTGAATGAATCCCAGATCGGTAGGAT GGCAACAGCCCCAGCACAAATGAAATTCTACCAGGAAGCTAGGATTAAGACTGCGGTATTCATGGGGTGCAGGAGCGGAG AGATTGAATTGGGCATGTCCAATCCAACAATGAAAAACTTGGAAATGGAGACGAAAAACTGGTTCCTTGAGGACTTCTCT CAACAGTTCTCTCCACAGTTTCCTCAGCCTGCTGACCAGAACCGGCAGTCGTCCTCTTCGTCGAGATCAATGTCCATGGA CAGCCCAGAGTACCCTCAGGCTCTTCTATTCAATATTCCAAACACATCCTACATTCCAGAACCCCTCAAAGAGGTTTCAA TGGAGCCAGCGTTGGGGCCACCATCAACCACAATTAGTACTCCACATGAGCAAGCCATGCAGGCCTTGAACCAAATCAGA AGCCTCAATTTCCCAAGCTTAGAGAGTGAACATGCTGCAATGACCAGAGCCATCCTTGCAGTCATATCTTCTTCTCCTCC ATCTTCTTCTTCTTCTTCTCATCACCCACCCCAGCATAATTATGTCAGTGCTTTCAGGAATTATAAAAAGCCTTCAACAG CCCAATTGACAGCCAGTTCAGGCAGGCAAAGTATGCTCAAAAGATCCATGGCATACTTTAAAAACTTACATTTGAGGAGA AGACAGGAACTTATACAAGGAAGCCATCCTTCAGTTTCTCAATTACACCATATGATATCAGAGAGGAAAAGGCGAGAAAA GCTCAATGAAAGCTTCCATGCATTGAGAACACTGCTTCCTCCCGGATCCAAGAAAGACAAAGCATCAGTTCTTAGCGGTA CAAGGGAGTACTTGAGTTCTTTAAAAGCTCAGATTTTAGAGCTTACCCAAAGAAACCAGGCTTTAGAAGCTCAAATTAAC CTGAAAAATGAAGGTAATAATGAAGGGGGTGGTGATTCTTCGAATGAGAGACTGAGTGTTCAGATTACAAATGCCTCAGA ACCAACACCAGAAGAGAGAAACATCGACTTACAAGTGACCGTGAGAGCAGACTGTTCTATCCTGGATTTGGTCATCCGGA TATTGGACTTCCTGAAACGGGTTAAGAATGTAAGCTTGATGTCCATGAACGCTGAGACCCGGATGGCAGAAACAAGTCCC ATTAATCACGTAATCCTGAGATTGAAAATCGAGGCCAGTGAATGGGACCAGTCTGCCTTCGAGGAAGCCATAAGAAGAGT TGTTGCAGACCTGGCAGTATAA |
Microexon DNA seq | GAAGCTAGGATTAAG |
Microexon Amino Acid seq | EARIK |
Microexon-tag DNA Seq | CAGATCGGTAGGATGGCAACAGCCCCAGCACAAATGAAATTCTACCAGGAAGCTAGGATTAAGACTGCGGTATTCATGGGGTGCAGGAGCGGAGAGATTGAATTGGGC |
Microexon-tag Amino Acid seq | QIGRMATAPAQMKFYQEARIKTAVFMGCRSGEIELG |
Transcript ID | VIT_11s0016g02070.t01 |
Gene ID | Vv.3310 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >VIT_11s0016g02070.t01 MDSTFLLDEATRTSFLRYVMESFGCSYICLWSYQPHPSSCLRFLDGCYHEENSNQPCSSSGSLARRLFNEYCNSVFILEN DISRVPGEAFKNCVSYMELNESQIGRMATAPAQMKFYQEARIKTAVFMGCRSGEIELGMSNPTMKNLEMETKNWFLEDFS QQFSPQFPQPADQNRQSSSSSRSMSMDSPEYPQALLFNIPNTSYIPEPLKEVSMEPALGPPSTTISTPHEQAMQALNQIR SLNFPSLESEHAAMTRAILAVISSSPPSSSSSSHHPPQHNYVSAFRNYKKPSTAQLTASSGRQSMLKRSMAYFKNLHLRR RQELIQGSHPSVSQLHHMISERKRREKLNESFHALRTLLPPGSKKDKASVLSGTREYLSSLKAQILELTQRNQALEAQIN LKNEGNNEGGGDSSNERLSVQITNASEPTPEERNIDLQVTVRADCSILDLVIRILDFLKRVKNVSLMSMNAETRMAETSP INHVILRLKIEASEWDQSAFEEAIRRVVADLAV* |
CDS seq | >VIT_11s0016g02070.t01 ATGGACTCTACCTTCCTGCTCGATGAAGCAACAAGGACGAGCTTTCTTCGGTATGTGATGGAGTCTTTTGGCTGCTCTTA CATTTGCCTTTGGTCATATCAACCGCACCCATCCAGCTGCTTGCGCTTCCTGGATGGGTGCTACCATGAAGAGAACAGCA ACCAACCCTGCTCCTCATCTGGGAGTCTAGCTAGGAGGCTTTTCAACGAATACTGTAATTCAGTATTCATCCTCGAAAAC GACATCAGCCGAGTTCCAGGGGAGGCGTTCAAGAATTGCGTGTCGTATATGGAGTTGAATGAATCCCAGATCGGTAGGAT GGCAACAGCCCCAGCACAAATGAAATTCTACCAGGAAGCTAGGATTAAGACTGCGGTATTCATGGGGTGCAGGAGCGGAG AGATTGAATTGGGCATGTCCAATCCAACAATGAAAAACTTGGAAATGGAGACGAAAAACTGGTTCCTTGAGGACTTCTCT CAACAGTTCTCTCCACAGTTTCCTCAGCCTGCTGACCAGAACCGGCAGTCGTCCTCTTCGTCGAGATCAATGTCCATGGA CAGCCCAGAGTACCCTCAGGCTCTTCTATTCAATATTCCAAACACATCCTACATTCCAGAACCCCTCAAAGAGGTTTCAA TGGAGCCAGCGTTGGGGCCACCATCAACCACAATTAGTACTCCACATGAGCAAGCCATGCAGGCCTTGAACCAAATCAGA AGCCTCAATTTCCCAAGCTTAGAGAGTGAACATGCTGCAATGACCAGAGCCATCCTTGCAGTCATATCTTCTTCTCCTCC ATCTTCTTCTTCTTCTTCTCATCACCCACCCCAGCATAATTATGTCAGTGCTTTCAGGAATTATAAAAAGCCTTCAACAG CCCAATTGACAGCCAGTTCAGGCAGGCAAAGTATGCTCAAAAGATCCATGGCATACTTTAAAAACTTACATTTGAGGAGA AGACAGGAACTTATACAAGGAAGCCATCCTTCAGTTTCTCAATTACACCATATGATATCAGAGAGGAAAAGGCGAGAAAA GCTCAATGAAAGCTTCCATGCATTGAGAACACTGCTTCCTCCCGGATCCAAGAAAGACAAAGCATCAGTTCTTAGCGGTA CAAGGGAGTACTTGAGTTCTTTAAAAGCTCAGATTTTAGAGCTTACCCAAAGAAACCAGGCTTTAGAAGCTCAAATTAAC CTGAAAAATGAAGGTAATAATGAAGGGGGTGGTGATTCTTCGAATGAGAGACTGAGTGTTCAGATTACAAATGCCTCAGA ACCAACACCAGAAGAGAGAAACATCGACTTACAAGTGACCGTGAGAGCAGACTGTTCTATCCTGGATTTGGTCATCCGGA TATTGGACTTCCTGAAACGGGTTAAGAATGTAAGCTTGATGTCCATGAACGCTGAGACCCGGATGGCAGAAACAAGTCCC ATTAATCACGTAATCCTGAGATTGAAAATCGAGGCCAGTGAATGGGACCAGTCTGCCTTCGAGGAAGCCATAAGAAGAGT TGTTGCAGACCTGGCAGTATAA |