
Microexon ID | Ps_NC_039359.1:62173815-62173829:- |
Species | Papaver somniferum | Coordinates | NC_039359.1:62173815..62173829 |
Microexon Cluster ID | MEP43 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GARCTTCTYAGWCTAGCWTCAACMGAARTACARMGACARTTYTWTCAGGARGCRAGGATTAAGACTGCTGTWTTCATGGGGTGYAACARWGGWGAAATTGARMTYGGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAGCGCGGATTAAG |
Microexon Amino Acid seq | EARIK |
Microexon-tag DNA Seq | GAGCTTCTTAATCGAGCTTCAACCGACATCCAGCGACAGTTTTATCAGGAAGCGCGGATTAAGTTGGCCGCATTCGCAAGTTGCAAAAGTGGTGCAATGGAAATCGGA |
Microexon-tag Amino Acid Seq | ELLNRASTDIQRQFYQEARIKLAAFASCKSGAMEIG |
Microexon-tag spanning region | 62173658-62173980 |
Microexon-tag prediction score | 0.9317 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026597013.1x |
Reference Transcript ID | XM_026597013.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026597013.1 |
Protein ID | XP_026452798.1 |
Gene ID | LOC113353409 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XP_026452798.1 MDSVFYLDEEVRTRFLQNLAQSLGCTYLCLWSYYPLPANYLFSTNGVLNYNAIVHQPASSSSASIASQAIIQTLFDAYRS TPHIIQNGLVPGLAFLEGIPYLEFKELELLNRASTDIQRQFYQEARIKLAAFASCKSGAMEIGMSSLDQSKNIEMEMMNW FPDDFILQQSKLVRNQQVQLPQRIDQSWPSSSSSSLKSLVSSPEYSPLLFSAPTAFPPQEFIKEVITSDHQTSKPNLVAA QSIDQQIEHAYNILGNVQFPNPENVDAALTKAMLAVLSSTPASSSLPHQHQHQQTQACSNHLSQEVGVFKRYKPEDNLLA LANNKLKTNYGGQNMLKRAIIFYKNMQMRKRIMEEQLAQGYRPTSSQLHHKMSERKRREKLNDSFLALKSLLPPGSKKDK VSLLSITRDYLVTLKDEIKELKRRNRFLETQLAPTKPTLITSGNDPEMGAASTSSDITVEIQLTEASEPSILSEEREVDL QVNVRSRYCDFMSLIRCLLEFLNQVDGVTLEFMEGNTTPAQVPNSSYGVVIRLKIKASQQHIFEESAFKEAIRRIIGDAA K* |
CDS seq | >XM_026597013.1 ATGGACTCGGTCTTCTACTTAGATGAAGAAGTCCGTACTCGTTTTCTACAAAACTTGGCACAATCTCTTGGTTGCACTTA TCTTTGTTTGTGGTCTTATTATCCTCTTCCTGCAAACTATCTATTCTCAACAAATGGAGTTCTCAACTATAATGCAATAG TACATCAGCCAGCTAGTTCTTCATCAGCATCAATAGCATCTCAAGCTATAATTCAAACCCTTTTCGACGCTTACCGTAGC ACGCCCCACATCATACAAAACGGATTGGTTCCGGGGCTTGCTTTCCTAGAAGGTATACCATATTTAGAATTCAAGGAATT GGAGCTTCTTAATCGAGCTTCAACCGACATCCAGCGACAGTTTTATCAGGAAGCGCGGATTAAGTTGGCCGCATTCGCAA GTTGCAAAAGTGGTGCAATGGAAATCGGAATGTCCAGTTTAGACCAGTCGAAAAACATTGAAATGGAGATGATGAATTGG TTTCCGGATGACTTCATCCTGCAACAGTCTAAACTTGTAAGAAATCAGCAAGTACAACTTCCTCAACGAATAGATCAAAG TTGGCCTTCGTCATCGTCTTCTTCATTAAAATCACTAGTGAGCAGTCCTGAGTACTCCCCTCTTCTGTTTAGTGCACCCA CTGCTTTTCCCCCTCAAGAATTCATTAAAGAAGTAATTACATCTGATCATCAAACAAGTAAACCTAATCTAGTGGCAGCT CAATCCATCGATCAACAGATAGAGCATGCTTATAACATACTTGGGAATGTTCAATTTCCAAACCCAGAAAACGTTGATGC AGCACTGACCAAAGCCATGCTAGCCGTTTTGTCATCAACGCCAGCATCATCTTCTTTACCTCATCAACACCAACACCAAC AAACTCAAGCTTGTAGTAATCACTTAAGTCAAGAAGTGGGAGTTTTCAAAAGATATAAACCCGAAGACAATCTACTAGCA CTTGCCAATAATAAGTTGAAAACCAACTACGGAGGACAAAATATGCTTAAGCGAGCAATTATCTTTTACAAAAACATGCA AATGAGAAAAAGGATAATGGAGGAACAACTCGCACAAGGATATCGTCCAACCAGTTCACAATTGCACCATAAAATGTCAG AACGTAAACGACGAGAGAAACTTAACGATAGCTTTCTTGCGTTGAAATCACTTTTACCACCAGGTTCCAAGAAAGATAAG GTATCATTGCTGTCAATTACAAGAGATTACTTAGTTACTCTTAAAGATGAAATCAAAGAGCTGAAACGAAGAAATCGTTT CCTTGAGACACAACTTGCACCAACAAAGCCTACACTCATAACAAGCGGTAATGATCCAGAAATGGGTGCAGCTAGCACTT CTTCGGATATTACGGTTGAAATTCAGTTAACCGAAGCTTCTGAACCATCAATATTATCTGAAGAACGAGAAGTTGATTTG CAAGTTAATGTGAGATCAAGATATTGTGATTTTATGAGTCTGATTAGATGTCTGCTTGAGTTCTTAAACCAAGTTGATGG TGTAACCTTAGAGTTCATGGAAGGAAATACTACACCAGCACAAGTGCCAAATTCTTCCTATGGAGTGGTCATTAGACTGA AAATCAAGGCTAGCCAGCAGCATATATTCGAAGAGTCAGCCTTCAAAGAAGCTATTAGAAGAATTATTGGTGATGCAGCA AAGTGA |
Microexon DNA seq | GAAGCGCGGATTAAG |
Microexon Amino Acid seq | EARIK |
Microexon-tag DNA Seq | GAGCTTCTTAATCGAGCTTCAACCGACATCCAGCGACAGTTTTATCAGGAAGCGCGGATTAAGTTGGCCGCATTCGCAAGTTGCAAAAGTGGTGCAATGGAAATCGGA |
Microexon-tag Amino Acid seq | ELLNRASTDIQRQFYQEARIKLAAFASCKSGAMEIG |
Transcript ID | XM_026597013.1 |
Gene ID | LOC113353409 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XM_026597013.1 MDSVFYLDEEVRTRFLQNLAQSLGCTYLCLWSYYPLPANYLFSTNGVLNYNAIVHQPASSSSASIASQAIIQTLFDAYRS TPHIIQNGLVPGLAFLEGIPYLEFKELELLNRASTDIQRQFYQEARIKLAAFASCKSGAMEIGMSSLDQSKNIEMEMMNW FPDDFILQQSKLVRNQQVQLPQRIDQSWPSSSSSSLKSLVSSPEYSPLLFSAPTAFPPQEFIKEVITSDHQTSKPNLVAA QSIDQQIEHAYNILGNVQFPNPENVDAALTKAMLAVLSSTPASSSLPHQHQHQQTQACSNHLSQEVGVFKRYKPEDNLLA LANNKLKTNYGGQNMLKRAIIFYKNMQMRKRIMEEQLAQGYRPTSSQLHHKMSERKRREKLNDSFLALKSLLPPGSKKDK VSLLSITRDYLVTLKDEIKELKRRNRFLETQLAPTKPTLITSGNDPEMGAASTSSDITVEIQLTEASEPSILSEEREVDL QVNVRSRYCDFMSLIRCLLEFLNQVDGVTLEFMEGNTTPAQVPNSSYGVVIRLKIKASQQHIFEESAFKEAIRRIIGDAA K* |
CDS seq | >XM_026597013.1 ATGGACTCGGTCTTCTACTTAGATGAAGAAGTCCGTACTCGTTTTCTACAAAACTTGGCACAATCTCTTGGTTGCACTTA TCTTTGTTTGTGGTCTTATTATCCTCTTCCTGCAAACTATCTATTCTCAACAAATGGAGTTCTCAACTATAATGCAATAG TACATCAGCCAGCTAGTTCTTCATCAGCATCAATAGCATCTCAAGCTATAATTCAAACCCTTTTCGACGCTTACCGTAGC ACGCCCCACATCATACAAAACGGATTGGTTCCGGGGCTTGCTTTCCTAGAAGGTATACCATATTTAGAATTCAAGGAATT GGAGCTTCTTAATCGAGCTTCAACCGACATCCAGCGACAGTTTTATCAGGAAGCGCGGATTAAGTTGGCCGCATTCGCAA GTTGCAAAAGTGGTGCAATGGAAATCGGAATGTCCAGTTTAGACCAGTCGAAAAACATTGAAATGGAGATGATGAATTGG TTTCCGGATGACTTCATCCTGCAACAGTCTAAACTTGTAAGAAATCAGCAAGTACAACTTCCTCAACGAATAGATCAAAG TTGGCCTTCGTCATCGTCTTCTTCATTAAAATCACTAGTGAGCAGTCCTGAGTACTCCCCTCTTCTGTTTAGTGCACCCA CTGCTTTTCCCCCTCAAGAATTCATTAAAGAAGTAATTACATCTGATCATCAAACAAGTAAACCTAATCTAGTGGCAGCT CAATCCATCGATCAACAGATAGAGCATGCTTATAACATACTTGGGAATGTTCAATTTCCAAACCCAGAAAACGTTGATGC AGCACTGACCAAAGCCATGCTAGCCGTTTTGTCATCAACGCCAGCATCATCTTCTTTACCTCATCAACACCAACACCAAC AAACTCAAGCTTGTAGTAATCACTTAAGTCAAGAAGTGGGAGTTTTCAAAAGATATAAACCCGAAGACAATCTACTAGCA CTTGCCAATAATAAGTTGAAAACCAACTACGGAGGACAAAATATGCTTAAGCGAGCAATTATCTTTTACAAAAACATGCA AATGAGAAAAAGGATAATGGAGGAACAACTCGCACAAGGATATCGTCCAACCAGTTCACAATTGCACCATAAAATGTCAG AACGTAAACGACGAGAGAAACTTAACGATAGCTTTCTTGCGTTGAAATCACTTTTACCACCAGGTTCCAAGAAAGATAAG GTATCATTGCTGTCAATTACAAGAGATTACTTAGTTACTCTTAAAGATGAAATCAAAGAGCTGAAACGAAGAAATCGTTT CCTTGAGACACAACTTGCACCAACAAAGCCTACACTCATAACAAGCGGTAATGATCCAGAAATGGGTGCAGCTAGCACTT CTTCGGATATTACGGTTGAAATTCAGTTAACCGAAGCTTCTGAACCATCAATATTATCTGAAGAACGAGAAGTTGATTTG CAAGTTAATGTGAGATCAAGATATTGTGATTTTATGAGTCTGATTAGATGTCTGCTTGAGTTCTTAAACCAAGTTGATGG TGTAACCTTAGAGTTCATGGAAGGAAATACTACACCAGCACAAGTGCCAAATTCTTCCTATGGAGTGGTCATTAGACTGA AAATCAAGGCTAGCCAGCAGCATATATTCGAAGAGTCAGCCTTCAAAGAAGCTATTAGAAGAATTATTGGTGATGCAGCA AAGTGA |