
Microexon ID | Ps_NC_039359.1:218972900-218972914:+ |
Species | Papaver somniferum | Coordinates | NC_039359.1:218972900..218972914 |
Microexon Cluster ID | MEP43 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GARCTTCTYAGWCTAGCWTCAACMGAARTACARMGACARTTYTWTCAGGARGCRAGGATTAAGACTGCTGTWTTCATGGGGTGYAACARWGGWGAAATTGARMTYGGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAGCGCGGATTAAG |
Microexon Amino Acid seq | EARIK |
Microexon-tag DNA Seq | GAGCTTCTTAATCGAGCTTCAACCGACATCCAGCGACAGTTTTATCAGGAAGCGCGGATTAAGTTGGCCGCATTCGTAAGTTGCAAAAGTTGTGAAATGGAAATCGGA |
Microexon-tag Amino Acid Seq | ELLNRASTDIQRQFYQEARIKLAAFVSCKSCEMEIG |
Microexon-tag spanning region | 218972749-218973071 |
Microexon-tag prediction score | 0.9332 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026596645.1x |
Reference Transcript ID | XM_026596645.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026596645.1 |
Protein ID | XP_026452430.1 |
Gene ID | LOC113352888 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XP_026452430.1 MDSVFYLDEEVRTRFLQNLAQSLGCTYLCLWSYYPLPANYLFSTNGLLNYNAIVHQPASSSSASIPSQAIIQTLFDAYRS TPHIIQNGLVPGLAFLEGIPYLEFKESELLNRASTDIQRQFYQEARIKLAAFVSCKSCEMEIGMSSLDQSKNIEMEMMNW FPDDFIPQQSKLLRNQQVQLPQRIDQSWPSSSSSSLKSLVSSPEYSPLLFSAPTAFPPQEFIKEVITSDHQTSKPNLVAA QSIDQQIEHAYNILGNVQFPNPENVDAALTKAMLAVLSSTPASSSLPHQHRHQQTQACSNHLSQEVGAFKRYKPEDNLLA LANNKLKTNYGGQNMLKRAIIFYKNMHMRKRIMEEPLAQGYRPTSSQLHHKMSERKRREKLNDSFLALKSLLPPGSKKDK VSLLSITRDYLVTLKDEIKELKRRNRFLETQLAPTELTLITSGNDPEMGAASTSSDITVEIQLTETSEPSIPSEEREVDL QVNVKSRHCDFMSLIRRLLEFLNQVDGVILEFMEGNTTPSQVPNSSYAVVFRLKIKACQQHVFEESAFKEAIRRIIGDAA K* |
CDS seq | >XM_026596645.1 ATGGACTCGGTCTTCTACTTAGATGAAGAAGTCCGTACTCGTTTTCTACAAAACTTGGCACAATCTCTTGGTTGCACTTA TCTTTGTTTATGGTCTTATTATCCTCTTCCTGCAAACTATCTATTCTCAACAAATGGACTTCTCAACTATAATGCAATAG TACACCAGCCAGCTAGTTCTTCATCAGCATCAATACCATCTCAAGCTATAATTCAAACCCTTTTCGACGCTTACCGTAGC ACGCCGCACATCATACAAAACGGATTGGTTCCGGGGCTTGCTTTCCTAGAAGGTATACCATATTTAGAATTCAAGGAATC GGAGCTTCTTAATCGAGCTTCAACCGACATCCAGCGACAGTTTTATCAGGAAGCGCGGATTAAGTTGGCCGCATTCGTAA GTTGCAAAAGTTGTGAAATGGAAATCGGAATGTCCAGTTTAGACCAGTCGAAAAACATTGAAATGGAGATGATGAATTGG TTTCCGGATGACTTCATCCCGCAGCAGTCTAAACTTCTAAGAAATCAGCAAGTACAACTTCCTCAACGAATCGATCAAAG TTGGCCTTCGTCATCGTCTTCTTCATTAAAATCACTAGTGAGCAGTCCTGAGTACTCACCTCTTCTGTTTAGTGCACCCA CTGCTTTTCCCCCTCAAGAATTCATTAAAGAAGTCATTACATCTGATCATCAAACAAGTAAACCTAATCTGGTGGCAGCT CAATCCATCGATCAACAGATAGAGCATGCTTATAACATACTTGGAAATGTTCAATTTCCAAACCCAGAGAACGTTGATGC AGCACTGACCAAAGCCATGCTAGCCGTTTTGTCATCAACACCAGCATCATCTTCTTTACCTCATCAACACCGACACCAAC AAACTCAAGCTTGTAGTAATCACTTAAGTCAAGAAGTGGGAGCTTTCAAAAGATATAAACCCGAAGACAATCTACTGGCA CTTGCCAATAATAAGTTGAAAACCAACTACGGAGGACAAAATATGCTTAAGCGAGCAATTATCTTTTACAAAAACATGCA TATGAGAAAAAGGATAATGGAGGAACCACTCGCACAAGGATATCGTCCAACCAGTTCACAATTGCACCATAAAATGTCAG AACGTAAACGACGAGAGAAACTTAACGATAGCTTTCTCGCGTTGAAATCACTTTTACCACCAGGTTCCAAGAAAGATAAG GTATCATTGCTGTCAATTACAAGAGATTACTTAGTTACTCTTAAAGATGAAATCAAAGAGCTGAAACGAAGAAATCGTTT CCTTGAGACACAACTTGCACCAACAGAGCTTACACTCATAACAAGCGGTAATGATCCAGAAATGGGTGCAGCTAGCACTT CTTCGGATATTACGGTTGAAATTCAGTTAACCGAAACTTCTGAACCATCCATACCATCAGAAGAACGAGAAGTTGATTTG CAAGTTAATGTGAAATCAAGACATTGTGATTTTATGAGTCTGATTAGACGTTTGCTTGAGTTCTTAAACCAAGTTGATGG TGTAATCTTGGAGTTCATGGAAGGAAATACTACACCATCACAAGTGCCAAATTCTTCCTATGCAGTGGTCTTTAGACTGA AAATCAAGGCTTGCCAGCAGCATGTATTTGAAGAGTCGGCCTTCAAAGAAGCTATTAGAAGAATTATCGGTGATGCAGCA AAGTGA |
Microexon DNA seq | GAAGCGCGGATTAAG |
Microexon Amino Acid seq | EARIK |
Microexon-tag DNA Seq | GAGCTTCTTAATCGAGCTTCAACCGACATCCAGCGACAGTTTTATCAGGAAGCGCGGATTAAGTTGGCCGCATTCGTAAGTTGCAAAAGTTGTGAAATGGAAATCGGA |
Microexon-tag Amino Acid seq | ELLNRASTDIQRQFYQEARIKLAAFVSCKSCEMEIG |
Transcript ID | XM_026596645.1 |
Gene ID | LOC113352888 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XM_026596645.1 MDSVFYLDEEVRTRFLQNLAQSLGCTYLCLWSYYPLPANYLFSTNGLLNYNAIVHQPASSSSASIPSQAIIQTLFDAYRS TPHIIQNGLVPGLAFLEGIPYLEFKESELLNRASTDIQRQFYQEARIKLAAFVSCKSCEMEIGMSSLDQSKNIEMEMMNW FPDDFIPQQSKLLRNQQVQLPQRIDQSWPSSSSSSLKSLVSSPEYSPLLFSAPTAFPPQEFIKEVITSDHQTSKPNLVAA QSIDQQIEHAYNILGNVQFPNPENVDAALTKAMLAVLSSTPASSSLPHQHRHQQTQACSNHLSQEVGAFKRYKPEDNLLA LANNKLKTNYGGQNMLKRAIIFYKNMHMRKRIMEEPLAQGYRPTSSQLHHKMSERKRREKLNDSFLALKSLLPPGSKKDK VSLLSITRDYLVTLKDEIKELKRRNRFLETQLAPTELTLITSGNDPEMGAASTSSDITVEIQLTETSEPSIPSEEREVDL QVNVKSRHCDFMSLIRRLLEFLNQVDGVILEFMEGNTTPSQVPNSSYAVVFRLKIKACQQHVFEESAFKEAIRRIIGDAA K* |
CDS seq | >XM_026596645.1 ATGGACTCGGTCTTCTACTTAGATGAAGAAGTCCGTACTCGTTTTCTACAAAACTTGGCACAATCTCTTGGTTGCACTTA TCTTTGTTTATGGTCTTATTATCCTCTTCCTGCAAACTATCTATTCTCAACAAATGGACTTCTCAACTATAATGCAATAG TACACCAGCCAGCTAGTTCTTCATCAGCATCAATACCATCTCAAGCTATAATTCAAACCCTTTTCGACGCTTACCGTAGC ACGCCGCACATCATACAAAACGGATTGGTTCCGGGGCTTGCTTTCCTAGAAGGTATACCATATTTAGAATTCAAGGAATC GGAGCTTCTTAATCGAGCTTCAACCGACATCCAGCGACAGTTTTATCAGGAAGCGCGGATTAAGTTGGCCGCATTCGTAA GTTGCAAAAGTTGTGAAATGGAAATCGGAATGTCCAGTTTAGACCAGTCGAAAAACATTGAAATGGAGATGATGAATTGG TTTCCGGATGACTTCATCCCGCAGCAGTCTAAACTTCTAAGAAATCAGCAAGTACAACTTCCTCAACGAATCGATCAAAG TTGGCCTTCGTCATCGTCTTCTTCATTAAAATCACTAGTGAGCAGTCCTGAGTACTCACCTCTTCTGTTTAGTGCACCCA CTGCTTTTCCCCCTCAAGAATTCATTAAAGAAGTCATTACATCTGATCATCAAACAAGTAAACCTAATCTGGTGGCAGCT CAATCCATCGATCAACAGATAGAGCATGCTTATAACATACTTGGAAATGTTCAATTTCCAAACCCAGAGAACGTTGATGC AGCACTGACCAAAGCCATGCTAGCCGTTTTGTCATCAACACCAGCATCATCTTCTTTACCTCATCAACACCGACACCAAC AAACTCAAGCTTGTAGTAATCACTTAAGTCAAGAAGTGGGAGCTTTCAAAAGATATAAACCCGAAGACAATCTACTGGCA CTTGCCAATAATAAGTTGAAAACCAACTACGGAGGACAAAATATGCTTAAGCGAGCAATTATCTTTTACAAAAACATGCA TATGAGAAAAAGGATAATGGAGGAACCACTCGCACAAGGATATCGTCCAACCAGTTCACAATTGCACCATAAAATGTCAG AACGTAAACGACGAGAGAAACTTAACGATAGCTTTCTCGCGTTGAAATCACTTTTACCACCAGGTTCCAAGAAAGATAAG GTATCATTGCTGTCAATTACAAGAGATTACTTAGTTACTCTTAAAGATGAAATCAAAGAGCTGAAACGAAGAAATCGTTT CCTTGAGACACAACTTGCACCAACAGAGCTTACACTCATAACAAGCGGTAATGATCCAGAAATGGGTGCAGCTAGCACTT CTTCGGATATTACGGTTGAAATTCAGTTAACCGAAACTTCTGAACCATCCATACCATCAGAAGAACGAGAAGTTGATTTG CAAGTTAATGTGAAATCAAGACATTGTGATTTTATGAGTCTGATTAGACGTTTGCTTGAGTTCTTAAACCAAGTTGATGG TGTAATCTTGGAGTTCATGGAAGGAAATACTACACCATCACAAGTGCCAAATTCTTCCTATGCAGTGGTCTTTAGACTGA AAATCAAGGCTTGCCAGCAGCATGTATTTGAAGAGTCGGCCTTCAAAGAAGCTATTAGAAGAATTATCGGTGATGCAGCA AAGTGA |