
Microexon ID | Gm_15:15478971-15478985:+ |
Species | Glycine max | Coordinates | 15:15478971..15478985 |
Microexon Cluster ID | MEP43 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GARCTTCTYAGWCTAGCWTCAACMGAARTACARMGACARTTYTWTCAGGARGCRAGGATTAAGACTGCTGTWTTCATGGGGTGYAACARWGGWGAAATTGARMTYGGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAGGCAAGGATTAAG |
Microexon Amino Acid seq | EARIK |
Microexon-tag DNA Seq | GAACTTCTCAGATTAGCATCCACAGAAATACAAATACAATTCTTTCAGGAGGCAAGGATTAAGACTGCTGTTTTCATGGGGTGTAACAAGGGAGAAATTGAGCTTGGT |
Microexon-tag Amino Acid Seq | ELLRLASTEIQIQFFQEARIKTAVFMGCNKGEIELG |
Microexon-tag spanning region | 15478805-15479131 |
Microexon-tag prediction score | 0.9797 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH12409x |
Reference Transcript ID | KRH12409 |
Gene ID | GLYMA_15G170500 |
Gene Name | NA |
Transcript ID | KRH12409 |
Protein ID | KRH12409 |
Gene ID | GLYMA_15G170500 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >KRH12409 MHPMESVFSLSVAARTDFIQFLVQSLGCSYICLWAYDSISPNRLSFLDGIYNVRNNQASSSLGSVQAQQLFSQFRTLTFD VNDDRVPGLAFRNQRPYLELQQLELLRLASTEIQIQFFQEARIKTAVFMGCNKGEIELGFLNMSQVDIQTALRSLFPEDF STRVQSQQIDQNPPTSSSSSLRSISTGSPEYSSLIFSIPGTSQPHFPPETLGASSSRVEPTMQPVPNSPHQRAIDIQALT EVPSLTQFPTPETEHDAIMRAILHVISPTTSYHHEQQHHQNLPYSNNFLPVVRPDASAFQRYRQDLGSNMASNFRRQSLM KRSLVFFRNMNFMRMRERVQATSRPTNTQLHHMISERRRREKLNENFQALRALLPPGTKKDKASILIAAKETLRSLMAEV DKLSNRNQGLTSLLPAKESTAEETKVASLSPNERLSVRISHVPESSTSEERMVELQVNVRGQVSQTDLLIRLLKFLKLAH HVSLVSMDANTHIAEGNNALHQLTFRLRIIQGSEWDESAFEEAVRRVVADLAQYQMDQ* |
CDS seq | >KRH12409 ATGCACCCCATGGAAAGTGTCTTCTCTCTCTCTGTAGCCGCCAGAACTGATTTTATCCAATTTCTGGTGCAGTCTTTGGG CTGCAGTTACATTTGTCTATGGGCATATGATTCCATTTCACCAAATCGTTTGAGCTTCTTGGATGGTATCTACAATGTAA GGAACAACCAAGCAAGCTCTAGTTTGGGGAGTGTGCAGGCACAACAGCTTTTCAGTCAGTTCCGGACTTTGACATTTGAT GTCAATGATGACCGTGTTCCTGGACTAGCTTTTAGGAATCAACGACCCTACCTAGAGCTCCAACAATTGGAACTTCTCAG ATTAGCATCCACAGAAATACAAATACAATTCTTTCAGGAGGCAAGGATTAAGACTGCTGTTTTCATGGGGTGTAACAAGG GAGAAATTGAGCTTGGTTTCTTAAATATGTCCCAAGTTGACATTCAAACAGCACTTAGGAGTTTGTTTCCTGAAGATTTT TCCACTAGAGTACAGTCCCAGCAAATTGATCAAAACCCTCCTACATCATCTTCATCTTCTCTGAGATCAATATCCACAGG TAGCCCTGAATACTCATCACTTATATTCAGTATTCCAGGCACATCTCAACCCCACTTTCCACCTGAGACTCTTGGAGCAT CATCATCAAGAGTAGAGCCAACAATGCAGCCAGTGCCAAATAGTCCTCACCAACGAGCCATTGATATTCAAGCATTGACA GAAGTCCCTTCTCTAACCCAATTCCCCACACCAGAAACTGAACATGATGCAATCATGAGAGCAATCCTCCATGTTATATC TCCAACAACTTCTTATCATCATGAGCAGCAGCACCACCAAAACTTGCCTTATAGTAATAATTTTCTTCCTGTGGTGCGTC CTGATGCTAGTGCTTTCCAGAGGTATAGACAAGACTTAGGCTCCAACATGGCCTCAAATTTCAGAAGGCAAAGCCTCATG AAGAGGTCTCTTGTGTTCTTTAGAAACATGAACTTTATGAGAATGAGAGAACGCGTTCAAGCAACGTCTCGTCCCACCAA TACTCAGCTTCATCATATGATATCAGAGAGGAGAAGGCGTGAGAAGCTAAACGAGAATTTTCAAGCACTTAGAGCACTTC TTCCTCCGGGAACAAAGAAAGACAAAGCGTCTATACTAATAGCAGCAAAGGAGACATTGAGGTCTTTGATGGCTGAAGTT GATAAACTAAGCAACAGAAATCAGGGATTGACGTCACTTTTGCCAGCCAAAGAATCTACAGCTGAAGAAACCAAGGTAGC TAGTTTATCACCAAATGAAAGATTAAGTGTCAGAATTTCACATGTACCCGAATCAAGCACATCAGAAGAGAGAATGGTGG AGTTGCAAGTGAATGTGAGAGGACAAGTTTCTCAAACTGATTTATTAATCCGGTTATTGAAATTCTTAAAACTGGCTCAC CACGTGAGTTTGGTTTCCATGGACGCAAACACTCACATTGCAGAAGGGAACAATGCACTTCATCAACTAACCTTCAGATT GAGGATTATTCAGGGAAGTGAATGGGACGAGTCTGCCTTCGAGGAAGCAGTAAGAAGAGTAGTTGCTGACTTGGCACAGT ACCAAATGGACCAATAA |
Microexon DNA seq | GAGGCAAGGATTAAG |
Microexon Amino Acid seq | EARIK |
Microexon-tag DNA Seq | GAACTTCTCAGATTAGCATCCACAGAAATACAAATACAATTCTTTCAGGAGGCAAGGATTAAGACTGCTGTTTTCATGGGGTGTAACAAGGGAGAAATTGAGCTTGGT |
Microexon-tag Amino Acid seq | ELLRLASTEIQIQFFQEARIKTAVFMGCNKGEIELG |
Transcript ID | Gm.18257.1 |
Gene ID | Gm.18257 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Gm.18257.1 MLSSKCFFPTRYFSNSLEDQHNYIFATPTCSRLSFLDGIYNVRNNQASSSLGSVQAQQLFSQFRTLTFDVNDDRVPGLAF RNQRPYLELQQLELLRLASTEIQIQFFQEARIKTAVFMGCNKGEIELGFLNMSQVDIQTALRSLFPEDFSTRVQSQQIDQ NPPTSSSSSLRSISTGSPEYSSLIFSIPGTSQPHFPPETLGASSSRVEPTMQPVPNSPHQRAIDIQALTEVPSLTQFPTP ETEHDAIMRAILHVISPTTSYHHEQQHHQNLPYSNNFLPVVRPDASAFQRYRQDLGSNMASNFRRQSLMKRSLVFFRNMN FMRMRERVQATSRPTNTQLHHMISERRRREKLNENFQALRALLPPGTKKDKASILIAAKETLRSLMAEVDKLSNRNQGLT SLLPAKESTAEETKVASLSPNERLSVRISHVPESSTSEERMVELQVNVRGQVSQTDLLIRLLKFLKLAHHVSLVSMDANT HIAEGNNALHQLTFRLRIIQGSEWDESAFEEAVRRVVADLAQYQMDQ* |
CDS seq | >Gm.18257.1 ATGTTAAGTAGTAAGTGCTTCTTTCCCACTAGGTACTTTTCAAACTCCCTGGAAGACCAACACAATTATATTTTTGCAAC ACCCACATGCAGTCGTTTGAGCTTCTTGGATGGTATCTACAATGTAAGGAACAACCAAGCAAGCTCTAGTTTGGGGAGTG TGCAGGCACAACAGCTTTTCAGTCAGTTCCGGACTTTGACATTTGATGTCAATGATGACCGTGTTCCTGGACTAGCTTTT AGGAATCAACGACCCTACCTAGAGCTCCAACAATTGGAACTTCTCAGATTAGCATCCACAGAAATACAAATACAATTCTT TCAGGAGGCAAGGATTAAGACTGCTGTTTTCATGGGGTGTAACAAGGGAGAAATTGAGCTTGGTTTCTTAAATATGTCCC AAGTTGACATTCAAACAGCACTTAGGAGTTTGTTTCCTGAAGATTTTTCCACTAGAGTACAGTCCCAGCAAATTGATCAA AACCCTCCTACATCATCTTCATCTTCTCTGAGATCAATATCCACAGGTAGCCCTGAATACTCATCACTTATATTCAGTAT TCCAGGCACATCTCAACCCCACTTTCCACCTGAGACTCTTGGAGCATCATCATCAAGAGTAGAGCCAACAATGCAGCCAG TGCCAAATAGTCCTCACCAACGAGCCATTGATATTCAAGCATTGACAGAAGTCCCTTCTCTAACCCAATTCCCCACACCA GAAACTGAACATGATGCAATCATGAGAGCAATCCTCCATGTTATATCTCCAACAACTTCTTATCATCATGAGCAGCAGCA CCACCAAAACTTGCCTTATAGTAATAATTTTCTTCCTGTGGTGCGTCCTGATGCTAGTGCTTTCCAGAGGTATAGACAAG ACTTAGGCTCCAACATGGCCTCAAATTTCAGAAGGCAAAGCCTCATGAAGAGGTCTCTTGTGTTCTTTAGAAACATGAAC TTTATGAGAATGAGAGAACGCGTTCAAGCAACGTCTCGTCCCACCAATACTCAGCTTCATCATATGATATCAGAGAGGAG AAGGCGTGAGAAGCTAAACGAGAATTTTCAAGCACTTAGAGCACTTCTTCCTCCGGGAACAAAGAAAGACAAAGCGTCTA TACTAATAGCAGCAAAGGAGACATTGAGGTCTTTGATGGCTGAAGTTGATAAACTAAGCAACAGAAATCAGGGATTGACG TCACTTTTGCCAGCCAAAGAATCTACAGCTGAAGAAACCAAGGTAGCTAGTTTATCACCAAATGAAAGATTAAGTGTCAG AATTTCACATGTACCCGAATCAAGCACATCAGAAGAGAGAATGGTGGAGTTGCAAGTGAATGTGAGAGGACAAGTTTCTC AAACTGATTTATTAATCCGGTTATTGAAATTCTTAAAACTGGCTCACCACGTGAGTTTGGTTTCCATGGACGCAAACACT CACATTGCAGAAGGGAACAATGCACTTCATCAACTAACCTTCAGATTGAGGATTATTCAGGGAAGTGAATGGGACGAGTC TGCCTTCGAGGAAGCAGTAAGAAGAGTAGTTGCTGACTTGGCACAGTACCAAATGGACCAATAA |