
Microexon ID | Vv_2:2945617-2945631:- |
Species | Vistis vinifera | Coordinates | 2:2945617..2945631 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGCATCTATCCAG |
Microexon Amino Acid seq | SASIQ |
Microexon-tag DNA Seq | GCTCCTTATGCAGAGAGCAAAGTGTTCAGCCGCTCTCTGCTAGCAAAGAGTGCATCTATCCAGACTGTGGTATGCTTTCCATATTTAGGAGGTGTGATAGAGCTGGGT |
Microexon-tag Amino Acid Seq | APYAESKVFSRSLLAKSASIQTVVCFPYLGGVIELG |
Microexon-tag spanning region | 2945350-2945833 |
Microexon-tag prediction score | 0.9515 |
Overlapped with the annotated transcript (%) | 86.11 |
New Transcript ID | VIT_02s0025g03450.t01x |
Reference Transcript ID | VIT_02s0025g03450.t01 |
Gene ID | VIT_02s0025g03450 |
Gene Name | NA |
Vv_2:2945617-2945631:- does not have available information here.
Microexon DNA seq | AGTGCATCTATCCAG |
Microexon Amino Acid seq | SASIQ |
Microexon-tag DNA Seq | GCTCCTTATGCAGAGAGCAAAGTGTTCAGCCGCTCTCTGCTAGCAAAGAGTGCATCTATCCAGACTGTGGTATGCTTTCCATATTTAGGAGGTGTGATAGAGCTGGGT |
Microexon-tag Amino Acid seq | APYAESKVFSRSLLAKSASIQTVVCFPYLGGVIELG |
Transcript ID | Vv.19900.1 |
Gene ID | Vv.19900 |
Gene Name | NA |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 1.9e-54 |
Motif start | 14 |
Motif end | 197 |
Protein seq | >Vv.19900.1 MDTEPQNQGVPENLRNQLALAVRNIQWSYAIFWSISTRQPGVLEWGDGYYNGDIKTRKTVQAVEFNADQMGLQRSEQLRE LYESLSIGESNPQPRRHSAALSPEDLTDAEWYYLVCMSFVFDIGQGLPGRTLASGQPIWLCNAPYAESKVFSRSLLAKSA SIQTVVCFPYLGGVIELGATEMVLEDPSLIQHIKTSFLEIPYPMLSRISNSRKIREDKDPASAELDHNFLDTNLNPAVLE VGSPNNSSDGFELNQLGEESIMVDCLNGGGASQVQSWQLLEDEFSNCVHNSMNSSDCISQTIMNPEKVVPISKGEKVNDH CLVDLQECNNTKLTSLDLRDDLHYQCILSSLLSSNQLILGPCFRNSNKESSFVSWKKRGLMGTQKLNTGTQQKLLKKVLF EVAQMHGGCLMSSRDNNGDNDEIWRPEADEITLNHVLSERKRREKINERFSVLRSLVPSINQVNKVSVLDDTIEYLKELK RRVEELESSKESTEIEARTSRRTPDTAERTSDNYGNDRVGNGKKPLLNKRKACDIDEMEPDSNRVLLKDDSAENITVNMN EKDILIELRCPWRECLLLEIMDAVSNLHLDSQSVQSASVDGILSLTIKSKFKGSSFASAETIRQALQRVVPKC* |
CDS seq | >Vv.19900.1 ATGGATACTGAACCCCAAAATCAAGGAGTGCCAGAGAACCTAAGGAACCAGCTTGCCCTTGCTGTTAGAAACATTCAATG GAGCTATGCAATCTTCTGGTCAATTTCAACTAGACAACCAGGGGTACTGGAGTGGGGAGATGGGTACTACAATGGAGACA TCAAAACAAGAAAAACCGTTCAGGCTGTGGAGTTCAATGCTGACCAAATGGGGTTGCAGAGAAGTGAGCAATTGAGAGAA CTTTACGAGTCCCTTTCAATAGGTGAATCCAACCCACAACCCAGAAGGCATTCTGCAGCATTATCACCTGAAGACCTCAC AGATGCAGAGTGGTATTACTTGGTTTGCATGTCCTTCGTGTTCGATATAGGCCAAGGATTGCCCGGAAGAACATTGGCTA GTGGCCAGCCTATCTGGCTATGCAATGCTCCTTATGCAGAGAGCAAAGTGTTCAGCCGCTCTCTGCTAGCAAAGAGTGCA TCTATCCAGACTGTGGTATGCTTTCCATATTTAGGAGGTGTGATAGAGCTGGGTGCGACTGAAATGGTTTTGGAGGACCC GAGTCTCATCCAACACATCAAAACTTCTTTTCTGGAGATTCCATACCCCATGCTGTCCAGGATATCTAATTCCAGAAAGA TAAGAGAAGACAAAGACCCTGCTTCTGCAGAGCTTGATCATAATTTTCTCGACACCAACCTTAATCCAGCAGTTTTAGAA GTAGGTTCTCCAAATAACAGCTCAGATGGGTTTGAGCTGAATCAATTGGGAGAGGAATCGATTATGGTTGACTGCTTAAA TGGTGGGGGAGCTTCTCAGGTACAAAGCTGGCAACTCTTGGAGGATGAATTCAGTAACTGTGTCCATAACTCAATGAACT CTAGTGACTGCATATCTCAGACCATCATGAATCCTGAAAAGGTTGTTCCTATTTCAAAGGGTGAAAAGGTTAATGATCAT TGCCTGGTAGACCTTCAGGAATGCAATAACACCAAATTAACCTCATTGGATCTTCGGGATGATCTTCATTATCAGTGTAT TCTTTCATCCCTTTTGAGCTCCAACCAGTTGATTTTGGGACCATGCTTTCGAAATTCCAATAAGGAGTCAAGCTTCGTTA GTTGGAAGAAAAGAGGATTGATGGGTACTCAGAAGCTGAACACTGGAACCCAACAAAAATTATTGAAGAAGGTGCTGTTT GAAGTTGCTCAAATGCATGGTGGTTGCTTAATGAGCTCCCGGGATAATAATGGAGATAACGATGAAATTTGGAGACCAGA GGCTGACGAAATCACTCTGAACCATGTGTTGTCCGAGAGGAAACGGAGGGAAAAAATAAATGAAAGGTTCTCGGTTCTCA GATCACTTGTTCCTTCTATTAACCAGGTCAACAAAGTGTCTGTACTTGATGACACCATAGAATACCTGAAAGAGCTCAAA AGAAGAGTTGAAGAGTTGGAATCTAGCAAGGAGTCAACAGAAATAGAGGCAAGAACAAGCAGGAGAACCCCAGATACTGC AGAGAGGACATCTGATAACTATGGCAACGACAGAGTTGGAAATGGCAAGAAACCTTTGTTGAACAAGAGGAAGGCTTGTG ACATTGATGAAATGGAGCCTGATTCCAACCGGGTTTTACTGAAAGATGATTCAGCTGAAAATATAACAGTCAATATGAAC GAGAAGGATATTCTAATCGAACTGAGGTGTCCATGGAGAGAGTGCTTGTTGCTTGAGATCATGGATGCTGTAAGCAATCT CCATTTAGATTCTCAGTCAGTTCAGTCAGCCAGCGTTGATGGAATTCTTTCTCTGACCATTAAATCAAAGTTTAAGGGAT CATCATTTGCATCAGCAGAAACAATCAGACAAGCACTTCAGAGAGTTGTCCCAAAGTGTTGA |