Microexon ID Vv_2:2945617-2945631:-
Species Vistis vinifera
Coordinates 2:2945617..2945631
Microexon Cluster ID MEP42
Size 15
Phase 0
Pfam Domain Motif bHLH-MYC_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,15,45
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGTGCATCTATCCAG
Microexon Amino Acid seq SASIQ
Microexon-tag DNA Seq GCTCCTTATGCAGAGAGCAAAGTGTTCAGCCGCTCTCTGCTAGCAAAGAGTGCATCTATCCAGACTGTGGTATGCTTTCCATATTTAGGAGGTGTGATAGAGCTGGGT
Microexon-tag Amino Acid Seq APYAESKVFSRSLLAKSASIQTVVCFPYLGGVIELG
Microexon-tag spanning region2945350-2945833
Microexon-tag prediction score0.9515
Overlapped with the annotated transcript (%) 86.11
New Transcript ID VIT_02s0025g03450.t01x
Reference Transcript ID VIT_02s0025g03450.t01
Gene ID VIT_02s0025g03450
Gene Name NA
Vv_2:2945617-2945631:- does not have available information here.
Microexon DNA seq AGTGCATCTATCCAG
Microexon Amino Acid seq SASIQ
Microexon-tag DNA Seq GCTCCTTATGCAGAGAGCAAAGTGTTCAGCCGCTCTCTGCTAGCAAAGAGTGCATCTATCCAGACTGTGGTATGCTTTCCATATTTAGGAGGTGTGATAGAGCTGGGT
Microexon-tag Amino Acid seq APYAESKVFSRSLLAKSASIQTVVCFPYLGGVIELG
Transcript ID Vv.19900.1
Gene ID Vv.19900
Gene Name NA
Pfam domain motif bHLH-MYC_N
Motif E-value 1.9e-54
Motif start 14
Motif end 197
Protein seq >Vv.19900.1
MDTEPQNQGVPENLRNQLALAVRNIQWSYAIFWSISTRQPGVLEWGDGYYNGDIKTRKTVQAVEFNADQMGLQRSEQLRE
LYESLSIGESNPQPRRHSAALSPEDLTDAEWYYLVCMSFVFDIGQGLPGRTLASGQPIWLCNAPYAESKVFSRSLLAKSA
SIQTVVCFPYLGGVIELGATEMVLEDPSLIQHIKTSFLEIPYPMLSRISNSRKIREDKDPASAELDHNFLDTNLNPAVLE
VGSPNNSSDGFELNQLGEESIMVDCLNGGGASQVQSWQLLEDEFSNCVHNSMNSSDCISQTIMNPEKVVPISKGEKVNDH
CLVDLQECNNTKLTSLDLRDDLHYQCILSSLLSSNQLILGPCFRNSNKESSFVSWKKRGLMGTQKLNTGTQQKLLKKVLF
EVAQMHGGCLMSSRDNNGDNDEIWRPEADEITLNHVLSERKRREKINERFSVLRSLVPSINQVNKVSVLDDTIEYLKELK
RRVEELESSKESTEIEARTSRRTPDTAERTSDNYGNDRVGNGKKPLLNKRKACDIDEMEPDSNRVLLKDDSAENITVNMN
EKDILIELRCPWRECLLLEIMDAVSNLHLDSQSVQSASVDGILSLTIKSKFKGSSFASAETIRQALQRVVPKC*
CDS seq >Vv.19900.1
ATGGATACTGAACCCCAAAATCAAGGAGTGCCAGAGAACCTAAGGAACCAGCTTGCCCTTGCTGTTAGAAACATTCAATG
GAGCTATGCAATCTTCTGGTCAATTTCAACTAGACAACCAGGGGTACTGGAGTGGGGAGATGGGTACTACAATGGAGACA
TCAAAACAAGAAAAACCGTTCAGGCTGTGGAGTTCAATGCTGACCAAATGGGGTTGCAGAGAAGTGAGCAATTGAGAGAA
CTTTACGAGTCCCTTTCAATAGGTGAATCCAACCCACAACCCAGAAGGCATTCTGCAGCATTATCACCTGAAGACCTCAC
AGATGCAGAGTGGTATTACTTGGTTTGCATGTCCTTCGTGTTCGATATAGGCCAAGGATTGCCCGGAAGAACATTGGCTA
GTGGCCAGCCTATCTGGCTATGCAATGCTCCTTATGCAGAGAGCAAAGTGTTCAGCCGCTCTCTGCTAGCAAAGAGTGCA
TCTATCCAGACTGTGGTATGCTTTCCATATTTAGGAGGTGTGATAGAGCTGGGTGCGACTGAAATGGTTTTGGAGGACCC
GAGTCTCATCCAACACATCAAAACTTCTTTTCTGGAGATTCCATACCCCATGCTGTCCAGGATATCTAATTCCAGAAAGA
TAAGAGAAGACAAAGACCCTGCTTCTGCAGAGCTTGATCATAATTTTCTCGACACCAACCTTAATCCAGCAGTTTTAGAA
GTAGGTTCTCCAAATAACAGCTCAGATGGGTTTGAGCTGAATCAATTGGGAGAGGAATCGATTATGGTTGACTGCTTAAA
TGGTGGGGGAGCTTCTCAGGTACAAAGCTGGCAACTCTTGGAGGATGAATTCAGTAACTGTGTCCATAACTCAATGAACT
CTAGTGACTGCATATCTCAGACCATCATGAATCCTGAAAAGGTTGTTCCTATTTCAAAGGGTGAAAAGGTTAATGATCAT
TGCCTGGTAGACCTTCAGGAATGCAATAACACCAAATTAACCTCATTGGATCTTCGGGATGATCTTCATTATCAGTGTAT
TCTTTCATCCCTTTTGAGCTCCAACCAGTTGATTTTGGGACCATGCTTTCGAAATTCCAATAAGGAGTCAAGCTTCGTTA
GTTGGAAGAAAAGAGGATTGATGGGTACTCAGAAGCTGAACACTGGAACCCAACAAAAATTATTGAAGAAGGTGCTGTTT
GAAGTTGCTCAAATGCATGGTGGTTGCTTAATGAGCTCCCGGGATAATAATGGAGATAACGATGAAATTTGGAGACCAGA
GGCTGACGAAATCACTCTGAACCATGTGTTGTCCGAGAGGAAACGGAGGGAAAAAATAAATGAAAGGTTCTCGGTTCTCA
GATCACTTGTTCCTTCTATTAACCAGGTCAACAAAGTGTCTGTACTTGATGACACCATAGAATACCTGAAAGAGCTCAAA
AGAAGAGTTGAAGAGTTGGAATCTAGCAAGGAGTCAACAGAAATAGAGGCAAGAACAAGCAGGAGAACCCCAGATACTGC
AGAGAGGACATCTGATAACTATGGCAACGACAGAGTTGGAAATGGCAAGAAACCTTTGTTGAACAAGAGGAAGGCTTGTG
ACATTGATGAAATGGAGCCTGATTCCAACCGGGTTTTACTGAAAGATGATTCAGCTGAAAATATAACAGTCAATATGAAC
GAGAAGGATATTCTAATCGAACTGAGGTGTCCATGGAGAGAGTGCTTGTTGCTTGAGATCATGGATGCTGTAAGCAATCT
CCATTTAGATTCTCAGTCAGTTCAGTCAGCCAGCGTTGATGGAATTCTTTCTCTGACCATTAAATCAAAGTTTAAGGGAT
CATCATTTGCATCAGCAGAAACAATCAGACAAGCACTTCAGAGAGTTGTCCCAAAGTGTTGA