
Microexon ID | Ta_Un:28300674-28300688:- |
Species | Triticum Aestivum | Coordinates | Un:28300674..28300688 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACTGCGCCTATTCTG |
Microexon Amino Acid seq | TAPIL |
Microexon-tag DNA Seq | GCTCAATACGCAGACACTAAAACTTTCCAGCGCGCTCTCTTAGCAAAGACTGCGCCTATTCTGACAGTCGTTTGCATCCCCTTCATGGGTGGTGTGCTGGAGCTTGGA |
Microexon-tag Amino Acid Seq | AQYADTKTFQRALLAKTAPILTVVCIPFMGGVLELG |
Microexon-tag spanning region | 28300517-28300831 |
Microexon-tag prediction score | 0.9341 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCSU02G029400.1x |
Reference Transcript ID | TraesCSU02G029400.1 |
Gene ID | TraesCSU02G029400 |
Gene Name | NA |
Transcript ID | TraesCSU02G029400.1 |
Protein ID | |
Gene ID | TraesCSU02G029400 |
Gene Name | |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 1.20E-46 |
Motif start | 20 |
Motif end | 205 |
Protein seq | >TraesCSU02G029400.1 MALSAAPAGQAPPLGKQLSYQLAAAVRSINWTYTIFWSMSTSQRPPGVLTWKDGFYNGEVKTRKIISSTTTEVTANDLIL QRSEQLRELYESLLSGKADHRARRPAASLSPEDLGEAEWYYTLSMTYSFRPGQGLPGKSFVSNEHVWLYNAQYADTKTFQ RALLAKTAPILTVVCIPFMGGVLELGTSDLVLEDPDMVNRIGTSFWELPFQACLESEALSSSPSTNETRNREVEIVVFED LDHNVAKGFISELGEVESMSDANINCITEEVDEFYGLIEELDVCALEDNWVMERSFEFMSSLEMAPDMDAPRIDDNTITL SSSVNGCRPSCFTVWKRSSDWEGMDVRDPGESQKLLKKVLAGGGWTMRAQESNIKTHVLSERRRREKLNEMFLVLKSLVP SINKMDKASILAETITYLKELEQRVEELESSRAPSWHPKEATGQGLHDVAGRKKIKLSTGCKRKAPESEREDDDGPSNVV NVTMMDKEVILEVQCRWKKLLMKRVFDAIKSLHLDIISVHTSTPGGLLDLKIRATDQVSIAPPSKVAAGSATVAPGMITE ALQKAISNNWQN* |
CDS seq | >TraesCSU02G029400.1 ATGGCGTTATCAGCTGCTCCTGCCGGCCAGGCACCGCCGCTGGGTAAGCAGCTCAGCTACCAGCTCGCCGCTGCTGTGAG GAGCATCAACTGGACTTACACCATTTTCTGGTCCATGTCCACCAGCCAGCGCCCACCTGGAGTTCTGACGTGGAAGGACG GCTTCTACAACGGCGAGGTAAAGACGAGGAAGATCATAAGCTCGACTACCACGGAGGTTACCGCAAACGACCTCATCCTG CAGAGGAGCGAGCAGCTAAGGGAGCTCTACGAGTCTCTCCTGTCCGGCAAGGCGGACCACCGGGCGAGGCGTCCTGCCGC CTCGCTGTCCCCGGAGGATCTCGGGGAAGCCGAGTGGTACTACACGCTGAGCATGACTTACTCATTCCGGCCTGGTCAAG GGTTGCCAGGCAAGAGCTTTGTGAGCAATGAACATGTTTGGTTGTACAATGCTCAATACGCAGACACTAAAACTTTCCAG CGCGCTCTCTTAGCAAAGACTGCGCCTATTCTGACAGTCGTTTGCATCCCCTTCATGGGTGGTGTGCTGGAGCTTGGAAC GTCGGATTTGGTGTTGGAGGATCCAGACATGGTGAACAGGATCGGCACATCTTTCTGGGAGCTACCCTTCCAGGCGTGCT TGGAGTCGGAGGCGCTAAGCTCCAGTCCATCAACAAACGAAACTAGGAACAGGGAGGTAGAAATCGTCGTGTTCGAAGAC CTTGATCACAATGTCGCCAAGGGGTTCATCTCTGAGCTAGGCGAGGTCGAGAGCATGTCCGACGCCAACATCAATTGCAT CACTGAGGAAGTGGATGAGTTCTATGGCCTCATTGAGGAGTTGGACGTGTGTGCTCTCGAGGACAACTGGGTCATGGAAA GGTCCTTTGAGTTCATGTCTTCCTTGGAAATGGCGCCAGACATGGACGCACCAAGAATCGATGATAACACCATCACTTTA AGTAGTTCTGTTAATGGCTGTCGTCCATCCTGCTTTACTGTATGGAAGAGGTCATCAGACTGGGAAGGCATGGATGTGCG AGATCCCGGGGAGTCACAAAAGTTGCTGAAGAAAGTTTTGGCGGGTGGTGGATGGACAATGAGAGCTCAAGAAAGTAACA TCAAGACACATGTCTTGTCGGAAAGAAGACGCCGGGAGAAGCTCAACGAGATGTTCCTAGTTCTCAAGTCATTGGTCCCG TCCATTAACAAGATGGACAAAGCATCCATCCTCGCAGAGACGATAACTTATCTCAAAGAGCTAGAGCAAAGGGTAGAAGA GCTAGAATCTAGCAGGGCACCATCATGGCACCCAAAAGAAGCAACGGGACAGGGGCTCCATGATGTTGCCGGAAGGAAGA AGATCAAACTATCAACTGGATGCAAGAGGAAGGCGCCGGAGTCAGAGAGGGAGGATGACGATGGCCCAAGCAATGTTGTC AATGTGACCATGATGGACAAGGAGGTGATCTTGGAGGTGCAATGCCGATGGAAGAAGCTTTTGATGAAACGAGTGTTCGA CGCCATCAAGAGCCTCCATTTGGACATCATCTCTGTGCACACATCCACACCGGGTGGCCTTCTTGATCTCAAGATACGAG CCACTGACCAGGTCTCAATCGCACCACCTTCTAAGGTTGCGGCTGGTTCTGCTACTGTGGCACCTGGGATGATCACTGAA GCGCTTCAGAAAGCTATAAGCAACAACTGGCAAAATTAA |
Ta_Un:28300674-28300688:- does not have available information here.