
Microexon ID | Ta_Un:100235820-100235834:+ |
Species | Triticum Aestivum | Coordinates | Un:100235820..100235834 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCTGCGTCTATTAAG |
Microexon Amino Acid seq | AASIK |
Microexon-tag DNA Seq | GCTCAATTCGCAGACACCAAAACTTTCCAGCGCGCGCTCTTAGCAAAGGCTGCGTCTATTAAGACAGTCGTATGCATTCCCTTTATGGGTGGCGTGCTCGAGCTCGGG |
Microexon-tag Amino Acid Seq | AQFADTKTFQRALLAKAASIKTVVCIPFMGGVLELG |
Microexon-tag spanning region | 100235675-100235961 |
Microexon-tag prediction score | 0.9155 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCSU02G116000.1x |
Reference Transcript ID | TraesCSU02G116000.1 |
Gene ID | TraesCSU02G116000 |
Gene Name | NA |
Transcript ID | TraesCSU02G116000.1 |
Protein ID | |
Gene ID | TraesCSU02G116000 |
Gene Name | |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 1.70E-48 |
Motif start | 23 |
Motif end | 210 |
Protein seq | >TraesCSU02G116000.1 MALSVSAAAPGQGQQEPPWGKQLRYQLAAAVRSINWTYAIFWSISTGPPPAGVLAWKDGFYNGEIKTRKITSSTTEPTAD NLVLQTSEQLRELYESLLSGGNSDRRARRPAASLSPEDLGDAEWYYTVSMSYTFRPGQGLPGKSFVSNQHVWLCNAQFAD TKTFQRALLAKAASIKTVVCIPFMGGVLELGTSDPVLEDSNMVHWISTSFWELHLASLPACLESEEPSSNPSLAKRTGEA DIMFEDLNHNTIEGMISELREVECFSDVDLECITKEIDESHSLLEGLDMRALEDNWILDGSFEFMSSPQMVPAMDAPCTE DVNVTLSSSVEGTRPSCFIAWRRSTESKEADARVTEESQKLLKKIVAGGAWTNNGRGGTMARARETNIKAHVISERRRRE RLNEMFLVLKSLVPSIHKVDKASILVETIAYLKELEQRVKELESSGAPSPRLKERI* |
CDS seq | >TraesCSU02G116000.1 ATGGCGCTATCAGTATCAGCTGCTGCTCCCGGCCAGGGCCAGCAGGAACCGCCGTGGGGGAAGCAGTTGAGGTACCAGCT CGCTGCTGCTGTGAGGAGCATCAACTGGACTTACGCCATTTTCTGGTCCATATCCACCGGCCCTCCGCCTGCAGGAGTTC TGGCGTGGAAGGACGGCTTCTACAACGGCGAGATAAAGACGAGAAAGATCACCAGCTCAACGACGGAGCCGACTGCCGAC AACCTCGTCCTGCAGACAAGTGAGCAGCTGAGGGAGCTCTACGAGTCGCTCTTGTCCGGCGGCAACTCCGACCGCCGGGC AAGGCGTCCTGCCGCCTCGCTGTCGCCGGAGGATCTTGGGGACGCCGAGTGGTACTACACCGTAAGCATGAGTTACACCT TCCGACCTGGCCAAGGGTTGCCAGGCAAGAGCTTTGTGAGCAATCAACACGTTTGGCTGTGCAACGCTCAATTCGCAGAC ACCAAAACTTTCCAGCGCGCGCTCTTAGCAAAGGCTGCGTCTATTAAGACAGTCGTATGCATTCCCTTTATGGGTGGCGT GCTCGAGCTCGGGACGTCGGATCCGGTTTTGGAGGACTCAAACATGGTGCACTGGATCAGCACATCTTTCTGGGAGCTTC ACTTAGCATCATTACCAGCATGCTTGGAGTCAGAGGAGCCGAGCTCCAACCCGTCATTAGCAAAAAGAACTGGCGAGGCT GACATTATGTTCGAAGACCTCAATCACAACACCATTGAGGGGATGATCTCTGAGCTAAGGGAGGTCGAGTGTTTTTCTGA TGTCGACCTTGAGTGCATCACAAAGGAGATAGATGAGTCCCACAGCCTCCTCGAGGGGTTGGACATGCGTGCTCTCGAGG ACAACTGGATCTTGGACGGGTCCTTTGAGTTTATGTCTTCCCCGCAAATGGTGCCGGCTATGGATGCCCCATGCACGGAA GATGTCAACGTCACTTTAAGTAGCTCCGTTGAAGGCACTCGACCATCCTGTTTTATAGCTTGGAGGAGATCAACGGAGTC AAAAGAAGCGGATGCGCGGGTCACCGAGGAGTCACAAAAGTTGCTGAAGAAAATTGTGGCCGGCGGTGCATGGACGAACA ATGGTCGTGGTGGCACCATGGCGAGAGCTCGGGAAACTAACATCAAGGCCCATGTCATATCAGAGAGAAGGCGTCGGGAG AGGCTCAATGAGATGTTCCTAGTTCTCAAGTCACTAGTCCCGTCCATTCATAAGGTTGACAAAGCATCAATCCTTGTAGA AACGATAGCTTATCTCAAAGAGTTGGAGCAAAGGGTAAAAGAGCTAGAATCCAGCGGCGCACCATCACCGCGCCTGAAAG AAAGAATATGA |
Ta_Un:100235820-100235834:+ does not have available information here.