
Microexon ID | Ta_5A:709194426-709194440:+ |
Species | Triticum Aestivum | Coordinates | 5A:709194426..709194440 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCGCGCCTATTCAG |
Microexon Amino Acid seq | TAPIQ |
Microexon-tag DNA Seq | GCTCAATACGCAGACACCAAAACTTTCCAGCGCGCTCTCTTAGCAAAGACCGCGCCTATTCAGACAGTTGTTTGCATTCCCTTCATGGGTGGCGTGCTCGAGCTCGGG |
Microexon-tag Amino Acid Seq | AQYADTKTFQRALLAKTAPIQTVVCIPFMGGVLELG |
Microexon-tag spanning region | 709194285-709194609 |
Microexon-tag prediction score | 0.9372 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5A02G558500.1x |
Reference Transcript ID | TraesCS5A02G558500.1 |
Gene ID | TraesCS5A02G558500 |
Gene Name | NA |
Transcript ID | TraesCS5A02G558500.1 |
Protein ID | |
Gene ID | TraesCS5A02G558500 |
Gene Name | |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 3.20E-46 |
Motif start | 36 |
Motif end | 221 |
Protein seq | >TraesCS5A02G558500.1 MQETAKLAWQSMALSVSAAAPGQGQQEPPSGKQLSYQLAAAVRSINWTYAIFWSMSTGLRPPGVLTWKNGFYNGEVKTRK IISSTTTELTADDLVLQRSEQLRELYQSLLSGKADHRAKRPAASLSPEDLGEAEWYHTLSMTYAFRPGQGLPGKSFASNQ HVWLYNAQYADTKTFQRALLAKTAPIQTVVCIPFMGGVLELGTLDLVLEDPNMVNQIGTSFWELPFLACSESELPSSNPS IDEAGNREVDIVVLEDLDHNVAKGIISELGEVECMSDVNLDHVTEEVDEFYGLIEELDVRSLEDNWVMERSFEYMSSLEM APDMDARSIDDAIITLSSFVKGSRPSCFTVWKRSSDCEDMVARVTGESQKLLKKAIAGGAWTTRPQESNIKTHVLSERRR REKLNDMFLVLKSMVPSINKMDKASILAETITYLRELEQRVEELETSRAPSSRPNEAMGRGIHEVVSGKKIKLSTGSKRK VLETEMEDNDCPSNIVNVTVMDKEVLLEVQCRWKGLLMTRVFDAIKSLRLDIVSVHASTPEGLLDLKIRATQQASIAPTS KLAVGSATIAPGMITEALQKAICIR* |
CDS seq | >TraesCS5A02G558500.1 ATGCAGGAAACAGCAAAGCTAGCGTGGCAATCAATGGCGCTATCAGTATCAGCTGCTGCTCCCGGCCAGGGCCAGCAGGA ACCGCCGTCGGGGAAGCAGTTGAGCTACCAGCTCGCCGCTGCTGTGAGGAGCATCAACTGGACTTACGCCATTTTCTGGT CCATGTCCACCGGCCTGCGCCCACCTGGAGTTCTGACATGGAAGAACGGGTTCTATAACGGCGAGGTAAAGACAAGGAAG ATCATTAGCTCCACCACGACGGAGCTTACCGCCGACGACCTCGTCCTGCAGAGAAGCGAGCAACTGAGGGAGCTCTACCA GTCGCTCTTGTCCGGCAAGGCGGACCACCGTGCCAAGCGTCCCGCCGCCTCGCTGTCGCCGGAGGATCTCGGGGAAGCCG AGTGGTACCACACGCTAAGCATGACTTATGCCTTCCGGCCTGGTCAAGGGTTGCCAGGCAAGAGCTTTGCGAGCAATCAA CATGTTTGGTTATACAACGCTCAATACGCAGACACCAAAACTTTCCAGCGCGCTCTCTTAGCAAAGACCGCGCCTATTCA GACAGTTGTTTGCATTCCCTTCATGGGTGGCGTGCTCGAGCTCGGGACATTGGATTTGGTATTGGAGGATCCGAATATGG TGAACCAGATTGGCACATCTTTCTGGGAGCTACCCTTTTTGGCATGCTCGGAGTCTGAGCTGCCAAGCTCCAATCCATCA ATAGACGAAGCAGGGAACAGGGAGGTAGACATCGTCGTGTTAGAAGACCTCGATCACAATGTCGCCAAGGGGATAATCTC TGAGCTTGGGGAGGTCGAGTGCATGTCCGACGTCAACCTTGATCATGTCACTGAGGAGGTGGACGAGTTCTATGGCCTCA TCGAGGAGTTGGATGTGCGTTCTCTTGAGGACAACTGGGTCATGGAAAGGTCATTTGAGTACATGTCTTCCTTGGAAATG GCACCAGACATGGACGCACGGAGCATTGATGATGCCATCATCACTTTAAGTAGCTTTGTTAAAGGCTCTCGTCCATCCTG CTTTACGGTGTGGAAGAGGTCATCTGACTGTGAAGACATGGTTGCGCGGGTCACCGGGGAGTCACAAAAGTTGTTGAAGA AAGCTATAGCCGGCGGTGCATGGACAACGAGACCTCAAGAAAGTAACATCAAGACGCATGTCCTGTCGGAAAGGAGGCGC CGAGAGAAGCTCAATGATATGTTCCTAGTTCTCAAGTCAATGGTCCCGTCCATTAACAAGATGGACAAAGCATCCATCCT AGCTGAAACTATAACCTATCTCAGAGAGCTAGAACAAAGGGTAGAAGAGCTAGAAACTAGCAGGGCACCGTCATCGCGCC CAAATGAAGCAATGGGACGGGGGATCCATGAGGTTGTCAGCGGGAAGAAGATCAAGCTATCAACTGGATCAAAGAGGAAG GTGCTAGAGACGGAGATGGAGGACAATGATTGCCCAAGCAACATTGTTAATGTGACCGTGATGGACAAGGAGGTGCTCTT GGAGGTGCAGTGCCGATGGAAGGGGTTGTTGATGACACGGGTGTTCGACGCTATCAAGAGCCTCCGCCTGGACATCGTCT CTGTGCACGCATCCACACCGGAAGGTCTTCTTGATCTCAAGATACGAGCTACTCAGCAAGCCTCGATCGCACCAACTTCT AAGCTTGCAGTAGGTTCTGCTACCATTGCACCTGGGATGATCACTGAAGCGCTTCAGAAAGCTATATGCATCCGCTGA |
Ta_5A:709194426-709194440:+ does not have available information here.