
Microexon ID | Ta_4B:671705480-671705494:+ |
Species | Triticum Aestivum | Coordinates | 4B:671705480..671705494 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACTGCGCCTATTCAG |
Microexon Amino Acid seq | TAPIQ |
Microexon-tag DNA Seq | GCTCAATACGCAGACACCAAAACTTTCCAGCGCGCTCTCTTAGCAAAGACTGCGCCTATTCAGACAGTCGTTTGCATTCCCTTCATGGGTGGTGTGCTGGAGCTTGGA |
Microexon-tag Amino Acid Seq | AQYADTKTFQRALLAKTAPIQTVVCIPFMGGVLELG |
Microexon-tag spanning region | 671705339-671705651 |
Microexon-tag prediction score | 0.9478 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4B02G397400.1x |
Reference Transcript ID | TraesCS4B02G397400.1 |
Gene ID | TraesCS4B02G397400 |
Gene Name | NA |
Transcript ID | TraesCS4B02G397400.1 |
Protein ID | |
Gene ID | TraesCS4B02G397400 |
Gene Name | |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 8.10E-46 |
Motif start | 20 |
Motif end | 205 |
Protein seq | >TraesCS4B02G397400.1 MALSAAPGVEAPPSGKQLSYQLAAAVRSINWTYAIFWSLSTGLRPPGVLTWKGGFYNGEVKTRKIISSTTTEVTANDLIL QRSEQLRELYESLLSGKADHRARRPAASLSPEDLGEAEWYYTLSMTYSFRPSQGLPGKSFASNEHVWLYNAQYADTKTFQ RALLAKTAPIQTVVCIPFMGGVLELGTSDLVLEDPDMVNGIGTSFWELPFQACLESEAPSSSPSTNETRNRDVEIIVFED LDDNIAKGFISELGEVESMSDANINCVTEEVDDFYGLIEELDVCALEDNWVIERSFEFMSSLEMAPNMEAPRIDDNTVTL SSSVNGSRPSCFTVWKRSSDWEDMDVRDPGESQKLLKKVVAGGDWTMRAQESNIKTHVLSERRRREKLNEMFLVLKSLVP SINKMDKASILAETITYLKELEQRVEELESSRTPSWHPKEGTGRGLHDVAGRKKIKLSTGCKRKASESEREDGDGPSNVV NVIMMDKEVILEVQCRWKKLLMTRVFDAIKNLRLDIVSVHTSTPGGLLELKIRATHQVAAGFATVAPGMITEALQKAIGN RWQN* |
CDS seq | >TraesCS4B02G397400.1 ATGGCGCTATCAGCTGCCCCTGGCGTCGAGGCACCGCCGTCCGGGAAGCAGCTCAGCTACCAGCTCGCCGCTGCTGTGAG GAGCATCAACTGGACTTACGCCATTTTCTGGTCCTTGTCCACCGGCCTGCGCCCACCTGGAGTTCTGACGTGGAAGGGCG GCTTCTACAACGGCGAGGTAAAGACGAGGAAGATCATAAGCTCGACTACCACGGAGGTTACCGCAAACGACCTCATCCTG CAGAGGAGTGAGCAGCTAAGGGAGCTCTACGAGTCTCTCCTGTCCGGCAAGGCGGACCACCGGGCGAGGCGTCCTGCCGC CTCGCTGTCCCCGGAGGATCTCGGGGAAGCAGAGTGGTACTACACGCTGAGCATGACTTACTCATTCCGGCCTAGTCAAG GGTTGCCAGGCAAGAGCTTTGCGAGCAATGAACATGTTTGGTTGTACAATGCTCAATACGCAGACACCAAAACTTTCCAG CGCGCTCTCTTAGCAAAGACTGCGCCTATTCAGACAGTCGTTTGCATTCCCTTCATGGGTGGTGTGCTGGAGCTTGGAAC GTCGGATTTGGTGTTGGAGGATCCAGACATGGTGAACGGGATCGGCACATCTTTCTGGGAGCTACCCTTCCAGGCATGCT TGGAGTCAGAGGCGCCAAGCTCCAGTCCATCAACAAACGAAACTAGGAACAGGGATGTAGAAATCATCGTGTTCGAAGAC CTTGATGACAATATCGCCAAGGGGTTCATCTCTGAGCTAGGCGAGGTCGAGAGCATGTCCGACGCGAACATCAATTGCGT CACCGAGGAAGTGGATGATTTCTATGGCCTCATTGAGGAGTTGGACGTGTGTGCTCTTGAGGACAACTGGGTCATCGAAA GGTCCTTTGAGTTCATGTCTTCCTTGGAAATGGCGCCAAACATGGAAGCACCAAGAATCGATGATAACACCGTAACTTTA AGTAGCTCTGTTAATGGCTCTCGTCCATCCTGCTTTACCGTATGGAAGAGGTCATCAGACTGGGAAGACATGGATGTGCG GGATCCCGGGGAGTCACAAAAGTTGTTGAAGAAAGTTGTGGCTGGCGGTGACTGGACAATGAGAGCTCAAGAAAGTAACA TCAAGACACATGTCTTGTCGGAAAGAAGACGCCGGGAGAAGCTCAACGAGATGTTCCTAGTTCTCAAGTCATTGGTCCCG TCCATTAACAAGATGGACAAAGCATCCATCCTCGCAGAGACGATAACATATCTCAAAGAGCTAGAGCAAAGGGTAGAAGA GCTAGAATCTAGCAGGACACCATCATGGCACCCAAAAGAAGGAACGGGACGGGGACTCCATGATGTTGCCGGAAGGAAGA AGATCAAACTATCAACTGGATGCAAGAGGAAGGCGTCGGAGTCAGAGAGGGAGGATGGCGATGGCCCAAGCAATGTTGTC AATGTGATCATGATGGACAAGGAGGTGATCTTGGAGGTGCAATGCCGATGGAAGAAGCTGTTGATGACACGAGTGTTCGA CGCCATCAAGAACCTCCGTTTGGACATCGTCTCCGTGCACACATCCACACCGGGTGGCCTTCTTGAACTCAAGATACGAG CCACTCACCAGGTTGCGGCTGGTTTTGCTACCGTGGCACCTGGGATGATCACTGAAGCGCTTCAGAAAGCTATAGGCAAC CGCTGGCAAAATTAA |
Ta_4B:671705480-671705494:+ does not have available information here.