Microexon ID Ta_4B:671705480-671705494:+
Species Triticum   Aestivum
Coordinates 4B:671705480..671705494
Microexon Cluster ID MEP42
Size 15
Phase 0
Pfam Domain Motif bHLH-MYC_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,15,45
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACTGCGCCTATTCAG
Microexon Amino Acid seq TAPIQ
Microexon-tag DNA Seq GCTCAATACGCAGACACCAAAACTTTCCAGCGCGCTCTCTTAGCAAAGACTGCGCCTATTCAGACAGTCGTTTGCATTCCCTTCATGGGTGGTGTGCTGGAGCTTGGA
Microexon-tag Amino Acid Seq AQYADTKTFQRALLAKTAPIQTVVCIPFMGGVLELG
Microexon-tag spanning region671705339-671705651
Microexon-tag prediction score0.9478
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS4B02G397400.1x
Reference Transcript ID TraesCS4B02G397400.1
Gene ID TraesCS4B02G397400
Gene Name NA
Transcript ID TraesCS4B02G397400.1
Protein ID
Gene ID TraesCS4B02G397400
Gene Name
Pfam domain motif bHLH-MYC_N
Motif E-value 8.10E-46
Motif start 20
Motif end 205
Protein seq >TraesCS4B02G397400.1
MALSAAPGVEAPPSGKQLSYQLAAAVRSINWTYAIFWSLSTGLRPPGVLTWKGGFYNGEVKTRKIISSTTTEVTANDLIL
QRSEQLRELYESLLSGKADHRARRPAASLSPEDLGEAEWYYTLSMTYSFRPSQGLPGKSFASNEHVWLYNAQYADTKTFQ
RALLAKTAPIQTVVCIPFMGGVLELGTSDLVLEDPDMVNGIGTSFWELPFQACLESEAPSSSPSTNETRNRDVEIIVFED
LDDNIAKGFISELGEVESMSDANINCVTEEVDDFYGLIEELDVCALEDNWVIERSFEFMSSLEMAPNMEAPRIDDNTVTL
SSSVNGSRPSCFTVWKRSSDWEDMDVRDPGESQKLLKKVVAGGDWTMRAQESNIKTHVLSERRRREKLNEMFLVLKSLVP
SINKMDKASILAETITYLKELEQRVEELESSRTPSWHPKEGTGRGLHDVAGRKKIKLSTGCKRKASESEREDGDGPSNVV
NVIMMDKEVILEVQCRWKKLLMTRVFDAIKNLRLDIVSVHTSTPGGLLELKIRATHQVAAGFATVAPGMITEALQKAIGN
RWQN*
CDS seq >TraesCS4B02G397400.1
ATGGCGCTATCAGCTGCCCCTGGCGTCGAGGCACCGCCGTCCGGGAAGCAGCTCAGCTACCAGCTCGCCGCTGCTGTGAG
GAGCATCAACTGGACTTACGCCATTTTCTGGTCCTTGTCCACCGGCCTGCGCCCACCTGGAGTTCTGACGTGGAAGGGCG
GCTTCTACAACGGCGAGGTAAAGACGAGGAAGATCATAAGCTCGACTACCACGGAGGTTACCGCAAACGACCTCATCCTG
CAGAGGAGTGAGCAGCTAAGGGAGCTCTACGAGTCTCTCCTGTCCGGCAAGGCGGACCACCGGGCGAGGCGTCCTGCCGC
CTCGCTGTCCCCGGAGGATCTCGGGGAAGCAGAGTGGTACTACACGCTGAGCATGACTTACTCATTCCGGCCTAGTCAAG
GGTTGCCAGGCAAGAGCTTTGCGAGCAATGAACATGTTTGGTTGTACAATGCTCAATACGCAGACACCAAAACTTTCCAG
CGCGCTCTCTTAGCAAAGACTGCGCCTATTCAGACAGTCGTTTGCATTCCCTTCATGGGTGGTGTGCTGGAGCTTGGAAC
GTCGGATTTGGTGTTGGAGGATCCAGACATGGTGAACGGGATCGGCACATCTTTCTGGGAGCTACCCTTCCAGGCATGCT
TGGAGTCAGAGGCGCCAAGCTCCAGTCCATCAACAAACGAAACTAGGAACAGGGATGTAGAAATCATCGTGTTCGAAGAC
CTTGATGACAATATCGCCAAGGGGTTCATCTCTGAGCTAGGCGAGGTCGAGAGCATGTCCGACGCGAACATCAATTGCGT
CACCGAGGAAGTGGATGATTTCTATGGCCTCATTGAGGAGTTGGACGTGTGTGCTCTTGAGGACAACTGGGTCATCGAAA
GGTCCTTTGAGTTCATGTCTTCCTTGGAAATGGCGCCAAACATGGAAGCACCAAGAATCGATGATAACACCGTAACTTTA
AGTAGCTCTGTTAATGGCTCTCGTCCATCCTGCTTTACCGTATGGAAGAGGTCATCAGACTGGGAAGACATGGATGTGCG
GGATCCCGGGGAGTCACAAAAGTTGTTGAAGAAAGTTGTGGCTGGCGGTGACTGGACAATGAGAGCTCAAGAAAGTAACA
TCAAGACACATGTCTTGTCGGAAAGAAGACGCCGGGAGAAGCTCAACGAGATGTTCCTAGTTCTCAAGTCATTGGTCCCG
TCCATTAACAAGATGGACAAAGCATCCATCCTCGCAGAGACGATAACATATCTCAAAGAGCTAGAGCAAAGGGTAGAAGA
GCTAGAATCTAGCAGGACACCATCATGGCACCCAAAAGAAGGAACGGGACGGGGACTCCATGATGTTGCCGGAAGGAAGA
AGATCAAACTATCAACTGGATGCAAGAGGAAGGCGTCGGAGTCAGAGAGGGAGGATGGCGATGGCCCAAGCAATGTTGTC
AATGTGATCATGATGGACAAGGAGGTGATCTTGGAGGTGCAATGCCGATGGAAGAAGCTGTTGATGACACGAGTGTTCGA
CGCCATCAAGAACCTCCGTTTGGACATCGTCTCCGTGCACACATCCACACCGGGTGGCCTTCTTGAACTCAAGATACGAG
CCACTCACCAGGTTGCGGCTGGTTTTGCTACCGTGGCACCTGGGATGATCACTGAAGCGCTTCAGAAAGCTATAGGCAAC
CGCTGGCAAAATTAA
Ta_4B:671705480-671705494:+ does not have available information here.