
Microexon ID | Ta_2D:639533008-639533022:- |
Species | Triticum Aestivum | Coordinates | 2D:639533008..639533022 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACTGCGCCTATTCAG |
Microexon Amino Acid seq | TAPIQ |
Microexon-tag DNA Seq | GCTCAATACGCAGACACCAAAGCTTTCAAGCGCGCTCTCTTAGCAAAGACTGCGCCTATTCAGACAGTCGTTTGCATTCCCTTCATGGGTGGTGTGCTGGAGCTTGGG |
Microexon-tag Amino Acid Seq | AQYADTKAFKRALLAKTAPIQTVVCIPFMGGVLELG |
Microexon-tag spanning region | 639532851-639533164 |
Microexon-tag prediction score | 0.9491 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2D02G575600.1x |
Reference Transcript ID | TraesCS2D02G575600.1 |
Gene ID | TraesCS2D02G575600 |
Gene Name | NA |
Transcript ID | TraesCS2D02G575600.1 |
Protein ID | |
Gene ID | TraesCS2D02G575600 |
Gene Name | |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 3.10E-47 |
Motif start | 20 |
Motif end | 205 |
Protein seq | >TraesCS2D02G575600.1 MALSAAPAGQAPPLGKQLSYQLAAAVRSINWTYAIFWSMSTGLRPPGVLTWKDGFYNGEVKTRKIISLTTTEVTANDLIL QRSEQLRELYESLLSGKADHRGRRPAASLSPEDLGEAEWYYTLSMTYSFRPGQGLPGKSFASNQHVWLYNAQYADTKAFK RALLAKTAPIQTVVCIPFMGGVLELGTSDLVLEDPDMVNAIGTSFWELPFQACLESEAPSSSPSTNEIGNGEVDIVVFED LDHNVAERFISELGEVESMSDANINCATKEVDDFYDLIEELDVCALEDNLVMERSFEFMSSLEMAPDMDALRIDDNTITL SSSVNGSRPSCFTVWKRSSDWEDMDVRDLGESQKLLKKVVAGGGWTMRAQESNIKTHVLSERRHREKLNEMFLVLKSLVP SINKMDKASILAETITYLKELEQRVEELESSRAPSWHPKEATGRGLHDVARRKKIKLSTGCKRKAPESEREDDDGPTNVV NVTMMDNEVILEVQCRWKKLLMTRVFDAIRSLRLDIVSVHTSTPGGLLELKIRATHQVSTSPPPSKVAAGSGTVAPGMIT EALQKAIGNRWQN* |
CDS seq | >TraesCS2D02G575600.1 ATGGCGTTATCAGCTGCTCCTGCCGGCCAGGCACCGCCGCTGGGGAAGCAGCTCAGCTACCAGCTCGCCGCTGCTGTGAG GAGCATCAACTGGACTTACGCCATTTTCTGGTCCATGTCCACCGGCCTGCGCCCACCTGGAGTTCTGACGTGGAAGGACG GGTTCTACAACGGCGAGGTAAAGACGAGGAAGATCATAAGCTTGACTACCACGGAGGTTACCGCAAACGACCTCATCCTG CAGAGGAGCGAGCAGCTAAGGGAGCTCTACGAGTCTCTCCTGTCCGGCAAGGCGGACCACCGGGGGAGGCGTCCTGCCGC CTCGCTGTCGCCAGAGGATCTCGGGGAAGCCGAGTGGTACTACACACTGAGCATGACTTACTCATTCCGGCCTGGTCAAG GGTTGCCAGGCAAGAGCTTTGCGAGCAATCAGCATGTTTGGTTGTACAACGCTCAATACGCAGACACCAAAGCTTTCAAG CGCGCTCTCTTAGCAAAGACTGCGCCTATTCAGACAGTCGTTTGCATTCCCTTCATGGGTGGTGTGCTGGAGCTTGGGAC ATCGGATTTGGTGCTGGAGGATCCAGACATGGTGAACGCGATCGGCACATCATTCTGGGAGCTACCCTTCCAGGCATGCT TGGAGTCGGAGGCGCCAAGCTCTAGTCCATCAACAAATGAAATCGGAAACGGGGAGGTAGACATCGTCGTGTTCGAAGAC CTTGATCACAATGTCGCCGAGAGGTTCATCTCTGAGCTAGGCGAGGTTGAGAGCATGTCCGACGCCAACATCAATTGCGC CACCAAGGAAGTGGATGACTTCTATGACCTCATTGAGGAGTTGGACGTGTGTGCTCTTGAGGACAACTTGGTCATGGAAA GGTCCTTTGAGTTCATGTCTTCCTTGGAAATGGCGCCAGACATGGATGCACTAAGAATCGATGATAACACCATCACTTTA AGTAGCTCTGTTAATGGCTCTCGTCCATCCTGCTTTACCGTATGGAAGAGGTCATCAGACTGGGAAGACATGGATGTGCG GGATCTCGGGGAGTCACAAAAGTTGCTGAAGAAAGTTGTGGCGGGCGGTGGATGGACGATGAGAGCTCAAGAAAGTAACA TCAAGACACATGTCTTGTCGGAAAGAAGACACCGGGAGAAGCTCAATGAGATGTTCCTAGTTCTCAAGTCATTGGTCCCG TCCATTAACAAGATGGACAAAGCATCCATCCTCGCAGAGACGATAACCTATCTCAAAGAGCTAGAGCAAAGGGTAGAAGA GCTAGAATCTAGCAGGGCACCATCATGGCACCCAAAAGAAGCAACGGGACGGGGGCTCCATGATGTTGCTAGAAGGAAGA AGATCAAACTATCAACTGGATGCAAGAGGAAGGCGCCGGAGTCAGAGAGGGAGGATGACGATGGCCCAACCAATGTTGTC AATGTGACCATGATGGATAATGAGGTGATCTTGGAGGTGCAATGCCGATGGAAGAAGCTGTTGATGACACGAGTGTTCGA CGCCATCAGGAGCCTACGTTTGGACATCGTCTCCGTGCACACATCCACACCGGGTGGCCTTCTTGAACTCAAGATACGAG CCACTCACCAGGTCTCAACCTCACCACCACCTTCTAAGGTTGCGGCTGGTTCTGGTACTGTGGCACCTGGGATGATCACT GAAGCACTTCAGAAAGCTATAGGCAACCGCTGGCAAAATTAG |
Ta_2D:639533008-639533022:- does not have available information here.