Microexon ID Ta_2D:639533008-639533022:-
Species Triticum   Aestivum
Coordinates 2D:639533008..639533022
Microexon Cluster ID MEP42
Size 15
Phase 0
Pfam Domain Motif bHLH-MYC_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,15,45
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACTGCGCCTATTCAG
Microexon Amino Acid seq TAPIQ
Microexon-tag DNA Seq GCTCAATACGCAGACACCAAAGCTTTCAAGCGCGCTCTCTTAGCAAAGACTGCGCCTATTCAGACAGTCGTTTGCATTCCCTTCATGGGTGGTGTGCTGGAGCTTGGG
Microexon-tag Amino Acid Seq AQYADTKAFKRALLAKTAPIQTVVCIPFMGGVLELG
Microexon-tag spanning region639532851-639533164
Microexon-tag prediction score0.9491
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS2D02G575600.1x
Reference Transcript ID TraesCS2D02G575600.1
Gene ID TraesCS2D02G575600
Gene Name NA
Transcript ID TraesCS2D02G575600.1
Protein ID
Gene ID TraesCS2D02G575600
Gene Name
Pfam domain motif bHLH-MYC_N
Motif E-value 3.10E-47
Motif start 20
Motif end 205
Protein seq >TraesCS2D02G575600.1
MALSAAPAGQAPPLGKQLSYQLAAAVRSINWTYAIFWSMSTGLRPPGVLTWKDGFYNGEVKTRKIISLTTTEVTANDLIL
QRSEQLRELYESLLSGKADHRGRRPAASLSPEDLGEAEWYYTLSMTYSFRPGQGLPGKSFASNQHVWLYNAQYADTKAFK
RALLAKTAPIQTVVCIPFMGGVLELGTSDLVLEDPDMVNAIGTSFWELPFQACLESEAPSSSPSTNEIGNGEVDIVVFED
LDHNVAERFISELGEVESMSDANINCATKEVDDFYDLIEELDVCALEDNLVMERSFEFMSSLEMAPDMDALRIDDNTITL
SSSVNGSRPSCFTVWKRSSDWEDMDVRDLGESQKLLKKVVAGGGWTMRAQESNIKTHVLSERRHREKLNEMFLVLKSLVP
SINKMDKASILAETITYLKELEQRVEELESSRAPSWHPKEATGRGLHDVARRKKIKLSTGCKRKAPESEREDDDGPTNVV
NVTMMDNEVILEVQCRWKKLLMTRVFDAIRSLRLDIVSVHTSTPGGLLELKIRATHQVSTSPPPSKVAAGSGTVAPGMIT
EALQKAIGNRWQN*
CDS seq >TraesCS2D02G575600.1
ATGGCGTTATCAGCTGCTCCTGCCGGCCAGGCACCGCCGCTGGGGAAGCAGCTCAGCTACCAGCTCGCCGCTGCTGTGAG
GAGCATCAACTGGACTTACGCCATTTTCTGGTCCATGTCCACCGGCCTGCGCCCACCTGGAGTTCTGACGTGGAAGGACG
GGTTCTACAACGGCGAGGTAAAGACGAGGAAGATCATAAGCTTGACTACCACGGAGGTTACCGCAAACGACCTCATCCTG
CAGAGGAGCGAGCAGCTAAGGGAGCTCTACGAGTCTCTCCTGTCCGGCAAGGCGGACCACCGGGGGAGGCGTCCTGCCGC
CTCGCTGTCGCCAGAGGATCTCGGGGAAGCCGAGTGGTACTACACACTGAGCATGACTTACTCATTCCGGCCTGGTCAAG
GGTTGCCAGGCAAGAGCTTTGCGAGCAATCAGCATGTTTGGTTGTACAACGCTCAATACGCAGACACCAAAGCTTTCAAG
CGCGCTCTCTTAGCAAAGACTGCGCCTATTCAGACAGTCGTTTGCATTCCCTTCATGGGTGGTGTGCTGGAGCTTGGGAC
ATCGGATTTGGTGCTGGAGGATCCAGACATGGTGAACGCGATCGGCACATCATTCTGGGAGCTACCCTTCCAGGCATGCT
TGGAGTCGGAGGCGCCAAGCTCTAGTCCATCAACAAATGAAATCGGAAACGGGGAGGTAGACATCGTCGTGTTCGAAGAC
CTTGATCACAATGTCGCCGAGAGGTTCATCTCTGAGCTAGGCGAGGTTGAGAGCATGTCCGACGCCAACATCAATTGCGC
CACCAAGGAAGTGGATGACTTCTATGACCTCATTGAGGAGTTGGACGTGTGTGCTCTTGAGGACAACTTGGTCATGGAAA
GGTCCTTTGAGTTCATGTCTTCCTTGGAAATGGCGCCAGACATGGATGCACTAAGAATCGATGATAACACCATCACTTTA
AGTAGCTCTGTTAATGGCTCTCGTCCATCCTGCTTTACCGTATGGAAGAGGTCATCAGACTGGGAAGACATGGATGTGCG
GGATCTCGGGGAGTCACAAAAGTTGCTGAAGAAAGTTGTGGCGGGCGGTGGATGGACGATGAGAGCTCAAGAAAGTAACA
TCAAGACACATGTCTTGTCGGAAAGAAGACACCGGGAGAAGCTCAATGAGATGTTCCTAGTTCTCAAGTCATTGGTCCCG
TCCATTAACAAGATGGACAAAGCATCCATCCTCGCAGAGACGATAACCTATCTCAAAGAGCTAGAGCAAAGGGTAGAAGA
GCTAGAATCTAGCAGGGCACCATCATGGCACCCAAAAGAAGCAACGGGACGGGGGCTCCATGATGTTGCTAGAAGGAAGA
AGATCAAACTATCAACTGGATGCAAGAGGAAGGCGCCGGAGTCAGAGAGGGAGGATGACGATGGCCCAACCAATGTTGTC
AATGTGACCATGATGGATAATGAGGTGATCTTGGAGGTGCAATGCCGATGGAAGAAGCTGTTGATGACACGAGTGTTCGA
CGCCATCAGGAGCCTACGTTTGGACATCGTCTCCGTGCACACATCCACACCGGGTGGCCTTCTTGAACTCAAGATACGAG
CCACTCACCAGGTCTCAACCTCACCACCACCTTCTAAGGTTGCGGCTGGTTCTGGTACTGTGGCACCTGGGATGATCACT
GAAGCACTTCAGAAAGCTATAGGCAACCGCTGGCAAAATTAG
Ta_2D:639533008-639533022:- does not have available information here.