
Microexon ID | Ta_2D:522522831-522522845:+ |
Species | Triticum Aestivum | Coordinates | 2D:522522831..522522845 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACGGCGTCTATCCAG |
Microexon Amino Acid seq | TASIQ |
Microexon-tag DNA Seq | GCTCAGTGCGCAGACACCAAAACCTTCCAGCGCGCGCTCTTAGCAAAGACGGCGTCTATCCAGACAGTCGCCTGCATTCCATTGATGAGTGGTGTGCTTGAGCTCGGG |
Microexon-tag Amino Acid Seq | AQCADTKTFQRALLAKTASIQTVACIPLMSGVLELG |
Microexon-tag spanning region | 522522610-522522978 |
Microexon-tag prediction score | 0.9205 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2D02G406900.1x |
Reference Transcript ID | TraesCS2D02G406900.1 |
Gene ID | TraesCS2D02G406900 |
Gene Name | NA |
Transcript ID | TraesCS2D02G406900.1 |
Protein ID | |
Gene ID | TraesCS2D02G406900 |
Gene Name | |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 2.00E-51 |
Motif start | 23 |
Motif end | 206 |
Protein seq | >TraesCS2D02G406900.1 MALPVVHPSQEEPTLPPPAGKQLSNQLAAAVRSINWSYAIFWSISTSRPGVLTWKDGFYNGEIKTRKVTSSADLTADQLV LQRSEQLRELYESLLSGQCDHRARRPAAALSPEDLGDAEWYYTVCMSYAFRLGQGLPGRSFASNEHVWLCNAQCADTKTF QRALLAKTASIQTVACIPLMSGVLELGTTNTVLEDMDMVNRIGTSFWDLKFPTCSKSEEPNSSPSADDTGDADMVFEDLN HNTMATMMPGELELGEVECLSDGSLEQITKEINGFYGLCDELDVGALEENWIMGGSFEVMSSPEALPAPAATDGITDGAV TFSSVEPSRSSCFTAWKRSLDSTKDVAASVAGESQKLLKKVLAGGAWANNGGDGTARAQESTNTKNHVISERRRREKLNE MFLILKSLVPSIHKVDKASILAETIAYLRELEQKVEELESNRVAGTAVRKLHDVSGKKVLAGSKRKASELGGDDTERVLP KDDGPSNIVNVTVTDKEVLLEVQCRWKELLMTQVFDAIKSLRLDVLSVRASTPDGLLALKIRAQFAGPGAVEPGMISEAL QKAIRRR* |
CDS seq | >TraesCS2D02G406900.1 ATGGCGCTGCCGGTAGTTCATCCGAGCCAGGAAGAACCCACCCTACCGCCGCCGGCCGGGAAGCAACTCAGCAACCAGCT CGCTGCCGCTGTGAGGAGCATCAACTGGAGCTACGCAATATTCTGGTCCATTTCAACCAGCCGTCCAGGGGTTCTGACGT GGAAGGACGGGTTCTACAACGGCGAGATAAAGACGAGGAAGGTCACAAGCTCGGCGGACCTCACCGCCGACCAGCTCGTC CTGCAGAGGAGCGAGCAGCTGCGGGAGCTCTACGAGTCTCTTCTGTCCGGCCAGTGTGACCACCGGGCGAGGCGTCCCGC GGCCGCGCTGTCGCCGGAGGACCTCGGCGACGCCGAATGGTACTACACGGTCTGCATGAGCTACGCCTTCCGCCTTGGCC AAGGGTTGCCAGGCAGAAGCTTTGCGAGCAACGAGCATGTTTGGCTGTGCAATGCTCAGTGCGCAGACACCAAAACCTTC CAGCGCGCGCTCTTAGCAAAGACGGCGTCTATCCAGACAGTCGCCTGCATTCCATTGATGAGTGGTGTGCTTGAGCTCGG GACAACAAATACCGTTTTGGAGGACATGGACATGGTGAACCGGATCGGCACATCTTTCTGGGACTTGAAGTTCCCAACAT GCTCGAAGTCGGAGGAGCCGAACTCCAGCCCATCAGCAGACGATACTGGGGACGCTGACATGGTGTTCGAAGACCTCAAC CATAACACCATGGCCACGATGATGCCCGGGGAACTCGAGCTAGGGGAGGTCGAGTGCCTATCCGACGGTAGCCTCGAGCA GATCACGAAGGAGATCAACGGGTTCTACGGCCTCTGCGATGAGCTGGACGTGGGGGCTCTTGAGGAAAATTGGATCATGG GTGGGTCTTTCGAGGTCATGTCTTCGCCGGAAGCGCTGCCGGCGCCTGCCGCCACCGACGGGATCACTGATGGTGCTGTC ACTTTTAGCTCTGTTGAACCCTCTCGCTCATCATGCTTTACGGCATGGAAGAGATCGTTGGACTCAACAAAAGACGTGGC TGCGTCCGTCGCCGGGGAGTCGCAGAAGTTGCTGAAGAAAGTTTTGGCTGGTGGCGCATGGGCAAATAATGGTGGCGACG GTACTGCGAGAGCTCAGGAAAGCACCAACACAAAAAACCATGTCATTTCGGAGAGGAGGCGGCGAGAGAAGCTCAACGAG ATGTTTCTGATTCTCAAGTCATTGGTCCCGTCCATTCACAAGGTGGACAAGGCATCCATCCTAGCTGAAACGATAGCCTA CCTCAGAGAGCTGGAGCAGAAGGTGGAGGAGCTAGAATCCAACAGGGTGGCCGGAACAGCCGTCCGAAAACTCCATGACG TCAGTGGGAAGAAGGTGTTAGCTGGTTCCAAGAGAAAGGCGTCGGAGCTCGGCGGGGACGACACGGAGAGGGTGCTCCCC AAGGACGACGGCCCGAGCAACATCGTCAACGTCACCGTGACGGACAAAGAGGTGCTCCTGGAGGTGCAATGCCGGTGGAA GGAGCTGCTGATGACGCAAGTGTTCGACGCCATCAAGAGCCTCCGCCTGGACGTGCTCTCCGTGCGCGCGTCGACGCCCG ACGGCCTCCTCGCTCTCAAGATACGAGCTCAGTTTGCCGGTCCTGGAGCCGTGGAACCCGGGATGATCAGCGAAGCGCTT CAGAAAGCTATACGCAGGCGCTGA |
Ta_2D:522522831-522522845:+ does not have available information here.