
Microexon ID | Ta_2B:615353622-615353636:+ |
Species | Triticum Aestivum | Coordinates | 2B:615353622..615353636 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACGGCGTCTATCCAG |
Microexon Amino Acid seq | TASIQ |
Microexon-tag DNA Seq | GCTCAGTGCGCGGACACCAAGACCTTCCAACGCGCGCTCTTAGCAAAGACGGCGTCTATCCAGACAGTCGCCTGCATTCCATTGATGGGTGGTGTGCTTGAGCTCGGG |
Microexon-tag Amino Acid Seq | AQCADTKTFQRALLAKTASIQTVACIPLMGGVLELG |
Microexon-tag spanning region | 615353422-615353769 |
Microexon-tag prediction score | 0.9203 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2B02G428000.1x |
Reference Transcript ID | TraesCS2B02G428000.1 |
Gene ID | TraesCS2B02G428000 |
Gene Name | NA |
Transcript ID | TraesCS2B02G428000.1 |
Protein ID | |
Gene ID | TraesCS2B02G428000 |
Gene Name | |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 2.80E-51 |
Motif start | 34 |
Motif end | 215 |
Protein seq | >TraesCS2B02G428000.1 MHMKERNSVVMALSVVRPSQEEPTLPPAGKQFSNQLAAAVRSTNWSYAIFWSISTSRPGVLTWKDGFYNGEIKTRKVTSS ADLSADQLVLQRSEQLRELYESLLSGQCDHRARRPAAALSPEDLGDAEWYYTVCMSYAFRPGQGLPGRSFASNEHVWLCN AQCADTKTFQRALLAKTASIQTVACIPLMGGVLELGTTNTVLEDRDMVNRINTSFWDLKFPTSEEPNSSPSADDTGDADI VFEDLNHESIAAIIPGELELGEVECLSDGNLERITKEINGFYGLCDELDVGALEENWIMGGSLEVMSASEVSMAPAATDG ITDGAVTFSFVEPSRSSCFTAWKRSLDSTEDVDTSVAGESQKLLKKVLAGGAWANNGGDGTARAQESTNTKNHVISERRR REKLNEMFLILKSLVPSIHKVDKASILAETIAYLRELEQKVEELESNRAAATAVRKLHDVSGKKVLAGSKRKASELGGDD ADRVLSKEDVPSNVVNVTVTEKEVLLEVQCRWKELLMTQVFDAIKSLRLDVLSVRASTPDGLLALKIRAQFAGPAAVEPG MISEALQRAIRRR* |
CDS seq | >TraesCS2B02G428000.1 ATGCATATGAAGGAAAGAAATAGTGTGGTAATGGCGCTGTCAGTAGTTCGTCCGAGCCAGGAAGAGCCCACCCTACCGCC GGCCGGGAAGCAATTCAGCAACCAGCTCGCTGCCGCTGTGAGGAGCACCAACTGGAGCTACGCCATATTCTGGTCCATTT CAACCAGCCGTCCAGGGGTTCTGACGTGGAAGGACGGGTTCTACAACGGCGAGATAAAGACGAGGAAGGTCACCAGCTCA GCGGATCTCAGCGCCGACCAGCTCGTCCTGCAGAGGAGCGAGCAGCTGCGGGAGCTCTACGAGTCCCTCCTCTCCGGCCA GTGCGACCACCGGGCGAGGCGCCCCGCCGCCGCGCTGTCGCCGGAGGACCTCGGGGACGCCGAATGGTACTACACCGTCT GCATGAGCTACGCCTTCCGGCCTGGCCAAGGGTTGCCAGGCAGAAGCTTTGCGAGCAACGAGCATGTTTGGCTCTGCAAT GCTCAGTGCGCGGACACCAAGACCTTCCAACGCGCGCTCTTAGCAAAGACGGCGTCTATCCAGACAGTCGCCTGCATTCC ATTGATGGGTGGTGTGCTTGAGCTCGGGACAACAAATACTGTTTTGGAGGACAGGGACATGGTGAACCGGATCAACACAT CTTTCTGGGACCTAAAGTTCCCAACATCGGAGGAGCCAAACTCCAGCCCATCAGCAGATGATACTGGGGATGCCGACATC GTGTTCGAAGACCTCAACCATGAAAGCATAGCCGCCATAATACCCGGGGAACTCGAGCTAGGGGAGGTCGAGTGCCTATC CGACGGCAACCTCGAGCGGATCACGAAGGAGATCAATGGGTTCTACGGCCTCTGCGACGAGCTGGACGTGGGGGCTCTCG AGGAAAATTGGATCATGGGCGGGTCTTTGGAGGTCATGTCTGCGTCGGAAGTGTCGATGGCGCCTGCCGCCACCGACGGG ATCACTGATGGTGCTGTCACTTTTAGCTTCGTTGAACCCTCTCGCTCATCATGCTTTACGGCTTGGAAGAGATCGTTGGA CTCAACAGAAGACGTGGATACGTCCGTCGCCGGGGAGTCGCAGAAGTTGCTGAAGAAAGTTTTGGCCGGTGGCGCATGGG CAAATAATGGTGGTGACGGCACCGCGAGAGCTCAGGAAAGTACCAACACAAAAAACCATGTCATTTCGGAGAGGAGACGC CGGGAGAAGCTCAATGAGATGTTTCTGATTCTCAAGTCGTTGGTTCCGTCCATTCACAAGGTGGACAAGGCATCCATCCT AGCTGAAACGATAGCCTACCTCAGAGAGCTGGAGCAGAAGGTGGAGGAGCTAGAATCCAACAGGGCGGCCGCAACAGCCG TCCGAAAACTCCATGACGTCAGCGGGAAGAAGGTGTTAGCTGGTTCCAAGAGAAAGGCGTCGGAGCTCGGCGGGGACGAC GCGGACAGGGTGCTCTCCAAGGAGGACGTCCCGAGCAACGTCGTCAACGTCACCGTGACGGAAAAAGAGGTGCTCCTGGA GGTGCAATGCCGGTGGAAGGAGCTGCTCATGACACAAGTGTTCGACGCCATCAAGAGCCTCCGCCTGGACGTGCTCTCCG TGCGCGCGTCCACGCCCGACGGCCTCCTCGCTCTTAAGATACGAGCTCAGTTTGCCGGCCCTGCCGCCGTGGAGCCCGGG ATGATCAGCGAAGCGCTCCAGAGAGCCATACGCAGGCGCTGA |
Ta_2B:615353622-615353636:+ does not have available information here.