
Microexon ID | Ta_2A:667649143-667649157:+ |
Species | Triticum Aestivum | Coordinates | 2A:667649143..667649157 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACGGCGTCTATCCAG |
Microexon Amino Acid seq | TASIQ |
Microexon-tag DNA Seq | GCTCAGTGCGCAGACACGAAAACCTTCCAGCGCGCACTCTTAGCAAAGACGGCGTCTATCCAGACAGTCGCCTGCATTCCCTTAATGGGTGGTGTGCTTGAGCTCGGG |
Microexon-tag Amino Acid Seq | AQCADTKTFQRALLAKTASIQTVACIPLMGGVLELG |
Microexon-tag spanning region | 667648799-667649295 |
Microexon-tag prediction score | 0.9187 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2A02G409600.1x |
Reference Transcript ID | TraesCS2A02G409600.1 |
Gene ID | TraesCS2A02G409600 |
Gene Name | NA |
Transcript ID | TraesCS2A02G409600.1 |
Protein ID | |
Gene ID | TraesCS2A02G409600 |
Gene Name | |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 3.60E-50 |
Motif start | 25 |
Motif end | 206 |
Protein seq | >TraesCS2A02G409600.1 MALPVIRPSQEEPTLPPPARKQFSNQLAAAVRSINWSYAIFWSISTSRPGVLTWKDGFYNGEIKTRKVTSSADLTADQLV LQRSEQLRELYESLLCGQCDHRARRPAAALSPEDLGDAEWYYTVCMSYAFRPGQGLPGRSFAGNEHVWLCNAQCADTKTF QRALLAKTASIQTVACIPLMGGVLELGTTDTVLEDMGMVNPIRTSFWDLKFPTCSKSEEPNSSPSVDDTGDADIVFDVLN HDTMATMITGELEPGEVECLSDGNLERITKEINGFCGLCDELDVGALEENWIMGGSFEVMSSPEAPPAPVATDGVTSGAV AFSSIGPSHPSCFAAWKRSWHSAEDVVVPVTGSRRNC* |
CDS seq | >TraesCS2A02G409600.1 ATGGCGCTGCCAGTAATTCGTCCGAGCCAGGAAGAACCCACTCTACCGCCGCCGGCCCGGAAGCAATTCAGCAACCAGCT CGCTGCTGCTGTGAGGAGCATCAACTGGAGCTACGCCATATTCTGGTCCATTTCAACCAGCCGTCCAGGGGTTCTGACGT GGAAGGACGGGTTCTACAACGGCGAGATAAAGACGAGGAAGGTCACCAGCTCGGCGGACCTCACCGCCGACCAGCTCGTC CTGCAGAGGAGCGAGCAGCTGCGGGAGCTCTACGAGTCTCTCCTCTGCGGCCAGTGCGACCACCGGGCCAGGCGTCCAGC CGCCGCGCTGTCGCCGGAGGACCTCGGGGACGCCGAGTGGTACTACACGGTCTGCATGAGCTACGCCTTCCGCCCTGGCC AAGGGTTGCCAGGCAGAAGCTTTGCGGGCAACGAGCATGTTTGGCTGTGCAATGCTCAGTGCGCAGACACGAAAACCTTC CAGCGCGCACTCTTAGCAAAGACGGCGTCTATCCAGACAGTCGCCTGCATTCCCTTAATGGGTGGTGTGCTTGAGCTCGG GACAACAGATACCGTTTTGGAAGACATGGGCATGGTGAACCCGATCAGAACATCTTTCTGGGACTTGAAGTTCCCAACAT GTTCGAAGTCGGAGGAGCCGAACTCCAGCCCATCAGTAGACGATACTGGGGACGCTGACATCGTGTTCGATGTCCTCAAC CATGACACCATGGCCACAATGATAACCGGGGAACTTGAGCCAGGGGAGGTTGAGTGCCTATCCGATGGCAACCTCGAGCG GATCACGAAGGAGATCAACGGGTTCTGCGGCCTCTGCGATGAGCTGGATGTGGGGGCTCTCGAGGAAAACTGGATCATGG GCGGGTCTTTCGAGGTCATGTCTTCGCCGGAAGCGCCGCCAGCGCCTGTCGCCACGGACGGGGTCACTAGTGGTGCTGTT GCTTTTAGCTCCATTGGACCCTCTCACCCATCGTGCTTTGCGGCTTGGAAGAGATCATGGCACTCGGCCGAAGACGTGGT TGTGCCGGTCACCGGGAGTCGCAGAAATTGCTAA |
Ta_2A:667649143-667649157:+ does not have available information here.