
Microexon ID | Ta_2A:667012407-667012421:+ |
Species | Triticum Aestivum | Coordinates | 2A:667012407..667012421 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACGGCGTCTATCCAG |
Microexon Amino Acid seq | TASIQ |
Microexon-tag DNA Seq | GCTCAGTGCGCAGACACCAAAACCTTCCAACGCGCGCTCTTAGCAAAGACGGCGTCTATCCAGACAGTCGCCTGCATTCCATTGATGGGTGGTGTGCTTGAGCTGGGG |
Microexon-tag Amino Acid Seq | AQCADTKTFQRALLAKTASIQTVACIPLMGGVLELG |
Microexon-tag spanning region | 667011735-667012560 |
Microexon-tag prediction score | 0.9273 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2A02G409400.1x |
Reference Transcript ID | TraesCS2A02G409400.1 |
Gene ID | TraesCS2A02G409400 |
Gene Name | Myc1 |
Transcript ID | TraesCS2A02G409400.1 |
Protein ID | |
Gene ID | TraesCS2A02G409400 |
Gene Name | |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 3.80E-49 |
Motif start | 25 |
Motif end | 206 |
Protein seq | >TraesCS2A02G409400.1 MALPVVRPCQEEPTLPPPTGTQFSNQLAAAVRSINWSYAIFWSISTSRPGVLTWKDGFYNGEIKTRKVTSSADITADQLV LQRSEQLRELYESLLSGQCDHRARRPAAALSPEDLGDAEWYYTVCMGYAFRPGQGLPGRSFASNEHVWLCNAQCADTKTF QRALLAKTASIQTVACIPLMGGVLELGTTNTVLEDKGMVNWIGTSFWELKFPTCSKSEEPNSIPSVDDTGDADIVFDVLN HNTMAMMIPGELELGEVECLSDDNLERITKEINRFYGLYDELDVGALEENWTMGGCFEIMSSPEVPPAPAATNGITNGAV TLSSVEPSRSSCFTAWKRSWDSAEDMATLVARETQKLLKKALAGGAWANNGGDDTARAQESTNTKNHVISERRRREKLNE MFLILKSLVPSIHKVDKASILAETITYLRELEQKVEELGSNRAARTTAVRKRHEVGGKKVLARSKRKASELGGDDTERVL PKDDGLSSVINVTVTDNEVLLEVQCRWKELLMTQVFDAIKSLRLDVLSVRASTPDDLLALKIRAQFAGPGVVETGMISEA LQRAIRRP* |
CDS seq | >TraesCS2A02G409400.1 ATGGCGCTGCCAGTAGTTCGTCCATGCCAGGAAGAGCCCACCCTACCGCCGCCGACGGGGACGCAATTCAGCAACCAGCT AGCTGCCGCTGTGAGGAGCATCAACTGGAGCTACGCCATATTCTGGTCCATTTCAACCAGCCGTCCAGGGGTTCTGACGT GGAAGGACGGGTTCTACAACGGCGAGATAAAAACGAGGAAGGTCACCAGCTCGGCGGACATCACCGCCGACCAGCTCGTC CTGCAGAGGAGCGAGCAGCTGCGGGAGCTCTACGAGTCTCTCCTGTCCGGCCAGTGCGACCACCGGGCGAGGCGTCCCGC CGCCGCGCTGTCGCCTGAGGACCTCGGGGACGCCGAATGGTACTACACCGTCTGCATGGGCTACGCCTTCCGCCCTGGTC AAGGGTTGCCAGGCAGAAGCTTTGCGAGCAACGAGCATGTTTGGTTGTGCAATGCTCAGTGCGCAGACACCAAAACCTTC CAACGCGCGCTCTTAGCAAAGACGGCGTCTATCCAGACAGTCGCCTGCATTCCATTGATGGGTGGTGTGCTTGAGCTGGG GACAACAAACACAGTTTTGGAGGACAAGGGCATGGTAAACTGGATCGGCACATCTTTCTGGGAGCTGAAGTTCCCAACAT GCTCGAAGTCGGAGGAGCCGAACTCCATCCCATCAGTAGACGATACTGGGGACGCTGACATCGTGTTCGATGTCCTCAAC CATAATACCATGGCCATGATGATACCCGGGGAACTTGAGCTAGGGGAGGTCGAGTGCCTATCCGACGACAACCTTGAGCG AATCACGAAGGAGATCAATAGGTTCTACGGCCTCTACGATGAGCTGGACGTGGGTGCTCTCGAGGAAAACTGGACCATGG GTGGGTGTTTTGAGATCATGTCTTCGCCGGAAGTGCCGCCGGCGCCTGCCGCCACCAATGGGATCACTAATGGTGCTGTC ACTTTGAGCTCCGTTGAACCCTCTCGCTCATCATGCTTTACGGCTTGGAAGAGATCGTGGGACTCGGCCGAAGACATGGC TACGCTGGTCGCCAGGGAGACACAGAAGTTGCTGAAGAAAGCTTTGGCCGGTGGTGCATGGGCAAATAATGGTGGCGACG ACACCGCGAGAGCTCAGGAAAGTACCAACACCAAAAACCATGTCATTTCGGAGAGGAGGCGTCGGGAGAAGCTCAACGAG ATGTTTCTGATTCTCAAGTCATTGGTCCCGTCCATTCACAAGGTGGACAAGGCATCCATCCTAGCTGAGACGATAACCTA TCTCAGAGAGCTCGAACAGAAGGTGGAGGAGCTAGGATCCAACAGGGCGGCCAGAACAACAGCTGTCAGAAAACGCCATG AAGTCGGCGGGAAGAAGGTGTTAGCTCGTTCTAAGAGAAAGGCATCAGAGCTCGGCGGGGACGACACGGAGAGGGTGCTC CCCAAGGACGACGGCCTGAGCAGTGTCATCAACGTCACCGTGACTGACAACGAGGTGCTCCTGGAGGTGCAATGCCGGTG GAAGGAGCTGCTGATGACACAAGTGTTCGACGCCATCAAGAGCCTCCGCCTGGACGTGCTCTCCGTGCGCGCGTCGACGC CCGACGACCTCCTCGCTCTCAAGATACGAGCTCAGTTTGCCGGTCCTGGCGTCGTGGAAACTGGGATGATTAGCGAAGCA CTTCAGAGAGCTATTCGCAGGCCATGA |
Ta_2A:667012407-667012421:+ does not have available information here.