Microexon ID Ta_1D:79813151-79813165:+
Species Triticum   Aestivum
Coordinates 1D:79813151..79813165
Microexon Cluster ID MEP42
Size 15
Phase 0
Pfam Domain Motif bHLH-MYC_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,15,45
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGTGCAGGAATCAAG
Microexon Amino Acid seq SAGIK
Microexon-tag DNA Seq GCAAATGAAGTTGACAGCAGGGCATTCTCAAGAGCAATACTTGCCAGGAGTGCAGGAATCAAGACGATCGTATGCATGCTGATTGTCGACGGTGTCCTGGAGATCGGG
Microexon-tag Amino Acid Seq ANEVDSRAFSRAILARSAGIKTIVCMLIVDGVLEIG
Microexon-tag spanning region79812749-79813305
Microexon-tag prediction score0.8723
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS1D02G094000.1x
Reference Transcript ID TraesCS1D02G094000.1
Gene ID TraesCS1D02G094000
Gene Name NA
Transcript ID TraesCS1D02G094000.1
Protein ID
Gene ID TraesCS1D02G094000
Gene Name
Pfam domain motif bHLH-MYC_N
Motif E-value 1.40E-38
Motif start 8
Motif end 194
Protein seq >TraesCS1D02G094000.1
MASSGEVQRSLQAVAQGLRWTYAILWQLSPDQGALVWVEGHYNSAIKTRKTVQPAVAQAQAPAAAAEAADQARSRQLREL
FDSLAREAAAGGGTGFRDVHGCAQEARRPSAALAPEDLTETEWFYLMSASYSFPSGVGLPGRAFARGGHVWLSRANEVDS
RAFSRAILARSAGIKTIVCMLIVDGVLEIGTTKKKRWRKR*
CDS seq >TraesCS1D02G094000.1
ATGGCGAGCAGCGGCGAGGTGCAGAGATCGCTGCAGGCGGTGGCGCAGGGGCTGCGGTGGACGTACGCCATCCTCTGGCA
GCTCAGCCCCGACCAAGGCGCACTGGTGTGGGTGGAGGGGCACTACAACAGCGCCATCAAGACGCGCAAGACGGTGCAGC
CGGCCGTCGCCCAGGCGCAGGCGCCGGCGGCGGCGGCGGAGGCAGCCGACCAGGCCCGGAGCCGGCAGCTGCGGGAGCTG
TTCGACTCGCTGGCCAGGGAGGCTGCCGCGGGCGGCGGGACAGGCTTCAGGGACGTCCACGGCTGCGCCCAGGAGGCTCG
GCGGCCCAGTGCGGCGCTGGCGCCGGAAGACCTGACGGAGACGGAGTGGTTCTATCTCATGTCTGCCTCCTACTCCTTCC
CTTCCGGCGTCGGGTTACCTGGAAGGGCCTTTGCAAGGGGAGGGCACGTATGGCTTAGTAGAGCAAATGAAGTTGACAGC
AGGGCATTCTCAAGAGCAATACTTGCCAGGAGTGCAGGAATCAAGACGATCGTATGCATGCTGATTGTCGACGGTGTCCT
GGAGATCGGGACCACAAAAAAGAAAAGGTGGAGGAAGAGATAG
Ta_1D:79813151-79813165:+ does not have available information here.