
Microexon ID | Ta_1D:79813151-79813165:+ |
Species | Triticum Aestivum | Coordinates | 1D:79813151..79813165 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGCAGGAATCAAG |
Microexon Amino Acid seq | SAGIK |
Microexon-tag DNA Seq | GCAAATGAAGTTGACAGCAGGGCATTCTCAAGAGCAATACTTGCCAGGAGTGCAGGAATCAAGACGATCGTATGCATGCTGATTGTCGACGGTGTCCTGGAGATCGGG |
Microexon-tag Amino Acid Seq | ANEVDSRAFSRAILARSAGIKTIVCMLIVDGVLEIG |
Microexon-tag spanning region | 79812749-79813305 |
Microexon-tag prediction score | 0.8723 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1D02G094000.1x |
Reference Transcript ID | TraesCS1D02G094000.1 |
Gene ID | TraesCS1D02G094000 |
Gene Name | NA |
Transcript ID | TraesCS1D02G094000.1 |
Protein ID | |
Gene ID | TraesCS1D02G094000 |
Gene Name | |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 1.40E-38 |
Motif start | 8 |
Motif end | 194 |
Protein seq | >TraesCS1D02G094000.1 MASSGEVQRSLQAVAQGLRWTYAILWQLSPDQGALVWVEGHYNSAIKTRKTVQPAVAQAQAPAAAAEAADQARSRQLREL FDSLAREAAAGGGTGFRDVHGCAQEARRPSAALAPEDLTETEWFYLMSASYSFPSGVGLPGRAFARGGHVWLSRANEVDS RAFSRAILARSAGIKTIVCMLIVDGVLEIGTTKKKRWRKR* |
CDS seq | >TraesCS1D02G094000.1 ATGGCGAGCAGCGGCGAGGTGCAGAGATCGCTGCAGGCGGTGGCGCAGGGGCTGCGGTGGACGTACGCCATCCTCTGGCA GCTCAGCCCCGACCAAGGCGCACTGGTGTGGGTGGAGGGGCACTACAACAGCGCCATCAAGACGCGCAAGACGGTGCAGC CGGCCGTCGCCCAGGCGCAGGCGCCGGCGGCGGCGGCGGAGGCAGCCGACCAGGCCCGGAGCCGGCAGCTGCGGGAGCTG TTCGACTCGCTGGCCAGGGAGGCTGCCGCGGGCGGCGGGACAGGCTTCAGGGACGTCCACGGCTGCGCCCAGGAGGCTCG GCGGCCCAGTGCGGCGCTGGCGCCGGAAGACCTGACGGAGACGGAGTGGTTCTATCTCATGTCTGCCTCCTACTCCTTCC CTTCCGGCGTCGGGTTACCTGGAAGGGCCTTTGCAAGGGGAGGGCACGTATGGCTTAGTAGAGCAAATGAAGTTGACAGC AGGGCATTCTCAAGAGCAATACTTGCCAGGAGTGCAGGAATCAAGACGATCGTATGCATGCTGATTGTCGACGGTGTCCT GGAGATCGGGACCACAAAAAAGAAAAGGTGGAGGAAGAGATAG |
Ta_1D:79813151-79813165:+ does not have available information here.