
Microexon ID | Ta_1B:131783138-131783152:+ |
Species | Triticum Aestivum | Coordinates | 1B:131783138..131783152 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGCAGGAATCAAG |
Microexon Amino Acid seq | SAGIK |
Microexon-tag DNA Seq | GCAAATGAAGTTGACAGCAAGGCCTTCTCAAGAGCAATACTTGCCAGGAGTGCAGGAATCAAGACGGTCGTATGCATTCCGATTGTCGACGGTGTCCTGGAAATCGGG |
Microexon-tag Amino Acid Seq | ANEVDSKAFSRAILARSAGIKTVVCIPIVDGVLEIG |
Microexon-tag spanning region | 131782725-131783292 |
Microexon-tag prediction score | 0.9067 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1B02G113100.1x |
Reference Transcript ID | TraesCS1B02G113100.1 |
Gene ID | TraesCS1B02G113100 |
Gene Name | NA |
Transcript ID | TraesCS1B02G113100.1 |
Protein ID | |
Gene ID | TraesCS1B02G113100 |
Gene Name | |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 9.70E-45 |
Motif start | 9 |
Motif end | 207 |
Protein seq | >TraesCS1B02G113100.1 MASSGEVHRSLQAVAQGLRWTYAILWQLCPDQGALVWTEGHYNGAIKTRKTVQPAVAQAQAPAAEAADQARSRQLRELFD SLAREAAAGGGTGFRDVHGCAQEARRPSAALAPEDLTETEWFYLMSASYSFPPGVGLPGRAFARGGHVWLSRANEVDSKA FSRAILARSAGIKTVVCIPIVDGVLEIGTTEKVEEEMGLVQYAMAIFMDQQETHMIPSICHSNQTSHIDQQSLQTHTGQT KPEPNKFDPEYEDDEMEYDEDEIDAGCASGSETNTGRDYCRHGPPNITSNDDHATHNAGRSSELMQVEMSERVRDGCSSN LGDEIQMLMVCQNGTSDHSNLHVQDEPWHFLYEELCSGYPQSSAAGEDQAMAENAHYAHTVSLILHRNNARRQADGLNTR SYLAVSHRSSFSRWDAGIHGRTVAEGTTRQKMLKSVLLFFNAACNKPPGDLILRCDEAGARREVDFGASHVMQERKRREK LNERFIILRSLVPFVTKAHGQSVDTRGHDRVREAADEAHPGP* |
CDS seq | >TraesCS1B02G113100.1 ATGGCGAGCAGCGGCGAGGTGCACAGATCGCTGCAGGCGGTGGCGCAGGGGCTGCGCTGGACGTACGCCATCCTCTGGCA GCTCTGCCCCGACCAAGGCGCGCTGGTGTGGACGGAGGGCCACTACAACGGCGCCATCAAGACGCGCAAGACGGTGCAGC CGGCCGTCGCCCAGGCGCAGGCGCCGGCGGCGGAGGCAGCCGACCAGGCCCGGAGCCGGCAGCTGCGGGAGCTGTTCGAC TCGCTGGCCAGGGAGGCTGCCGCGGGAGGCGGCACAGGCTTCAGGGACGTCCACGGCTGCGCCCAGGAGGCTCGGCGGCC CAGCGCGGCGCTGGCGCCGGAAGACCTGACGGAGACGGAGTGGTTCTATCTAATGTCCGCCTCCTACTCCTTCCCTCCTG GCGTCGGGTTACCTGGAAGGGCCTTTGCAAGGGGAGGGCACGTATGGCTTAGTAGAGCAAATGAAGTTGACAGCAAGGCC TTCTCAAGAGCAATACTTGCCAGGAGTGCAGGAATCAAGACGGTCGTATGCATTCCGATTGTCGACGGTGTCCTGGAAAT CGGGACCACAGAAAAGGTGGAGGAAGAGATGGGTTTGGTCCAGTATGCAATGGCCATCTTCATGGATCAACAAGAAACCC ACATGATCCCCAGCATCTGCCATTCCAACCAAACCAGTCACATTGATCAACAGTCACTCCAAACACACACTGGTCAGACA AAGCCGGAGCCAAACAAGTTTGACCCAGAGTACGAGGATGATGAGATGGAGTACGACGAAGACGAGATCGATGCGGGGTG TGCATCGGGTTCGGAGACCAATACCGGAAGGGATTACTGCCGGCATGGTCCACCGAACATTACAAGCAATGATGATCATG CAACACATAATGCAGGGAGGAGCAGCGAGCTGATGCAGGTTGAGATGTCGGAGAGGGTGAGAGATGGGTGCTCAAGCAAT TTGGGCGATGAGATCCAAATGCTGATGGTCTGCCAGAATGGTACTAGTGACCATTCCAATTTGCATGTGCAAGATGAGCC CTGGCATTTTCTCTATGAGGAGTTGTGCAGTGGCTACCCCCAGTCGTCAGCTGCAGGTGAAGATCAAGCTATGGCTGAAA ATGCTCACTACGCACACACAGTCTCGCTGATCCTGCATCGCAACAACGCCCGGAGACAGGCCGACGGCCTGAACACCAGG TCCTACCTGGCAGTCTCACACCGATCTTCATTCTCCAGATGGGATGCTGGCATCCATGGACGCACGGTCGCCGAAGGCAC CACCCGGCAGAAGATGCTCAAGAGTGTCCTCCTGTTCTTCAATGCTGCCTGCAACAAGCCACCTGGTGATCTGATTCTGA GGTGCGACGAAGCCGGTGCGCGGAGGGAGGTCGACTTCGGCGCCAGCCATGTCATGCAGGAGCGGAAAAGAAGGGAGAAG CTCAACGAGAGGTTCATCATCCTGCGGTCCCTGGTGCCCTTCGTCACCAAGGCACATGGACAAAGCGTCGATACTCGGGG ACACGATCGAGTACGTGAAGCAGCTGACGAAGCGCATCCAGGACCTTGA |
Ta_1B:131783138-131783152:+ does not have available information here.