
Microexon ID | Ta_1A:98589723-98589737:+ |
Species | Triticum Aestivum | Coordinates | 1A:98589723..98589737 |
Microexon Cluster ID | MEP42 |
Size | 15 |
Phase | 0 |
Pfam Domain Motif | bHLH-MYC_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,15,45 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCWMAYKATGCMGAYAGYAAARTYTTYTCTCGMKCTHTKCTWGCMAAGAGTGCWTSWATTCAGACWGTGGTRTGYWTTCCYYWYMTRGRYGGYGTBRTTGARCTWGGY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGCAGGAATCAAG |
Microexon Amino Acid seq | SAGIK |
Microexon-tag DNA Seq | GCAAATGAAGTTGACAGCAAGGCATTCTCAAGAGCAATACTTGCCAGGAGTGCAGGAATCAAGACGGTCGTATGCATTCCGATTGTCGATGGTGTCCTAGAAATCGGG |
Microexon-tag Amino Acid Seq | ANEVDSKAFSRAILARSAGIKTVVCIPIVDGVLEIG |
Microexon-tag spanning region | 98589377-98589877 |
Microexon-tag prediction score | 0.9031 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1A02G102400.1x |
Reference Transcript ID | TraesCS1A02G102400.1 |
Gene ID | TraesCS1A02G102400 |
Gene Name | NA |
Transcript ID | TraesCS1A02G102400.1 |
Protein ID | |
Gene ID | TraesCS1A02G102400 |
Gene Name | |
Pfam domain motif | bHLH-MYC_N |
Motif E-value | 3.40E-44 |
Motif start | 8 |
Motif end | 209 |
Protein seq | >TraesCS1A02G102400.1 MASSGEVQRSLQAVAQGLRWTYALLWQLCPDQGALVWAEGHYNGAIKTRKTVQPAVAQAQVPAPAAEAADQARSRQLREL FDSLAREAAAGGGTGFRDVHGCAQEARRPSAALAPEDLTETEWFYLMSASYSFPPGVGLPGRAFARGGHVWLSRANEVDS KAFSRAILARSAGIKTVVCIPIVDGVLEIGTTEKVEEDMGLVQYAMAIFMDQQETHMISSICHSNQTSHIDQQSFQTQRK TPTGQPKPEPNKFNPEYEDDEMEYDDDEIDAECASGSASHDDHTTHNAGSSELMQVETSERVRDGCSSNFGDEIQMLMVC QNSTDDHSNLHGQNEAWHFLYEELCSGYPQSSGENQAMAENAHYAQTLSLILHRNNALRQGGGLNTGSYLAVSLQSSFSR WDAGIHGRTVAQGTTRQKMLKSVLLFFSAACNKPPGDPRCDDAGARREVDFGASHVMQERKRREKLNERFIVLRSLVPFV TKMDKASILGDTIEYVKQLTKRIQDLESSTVRGPAMSKEKRALPTGMEGASSSSGSTPVATDVQVSIIESDALLELRCPD THGLLVTIMQTLQEQLRLEVTSVQASSDHGVLLAELRAKVREVHGRRSSISQVKRAIHLIISSG* |
CDS seq | >TraesCS1A02G102400.1 ATGGCGAGCAGCGGCGAGGTGCAGAGATCGCTGCAGGCGGTGGCGCAGGGGCTGCGGTGGACGTACGCCCTCCTCTGGCA ACTCTGCCCCGACCAAGGAGCGCTGGTGTGGGCGGAGGGGCACTACAACGGCGCCATCAAGACGCGCAAGACGGTGCAGC CGGCCGTTGCCCAGGCGCAGGTACCGGCGCCGGCGGCGGAGGCAGCCGACCAGGCCCGGAGCCGGCAGCTGCGGGAGCTG TTCGACTCGCTGGCCAGGGAGGCTGCCGCGGGCGGCGGGACAGGCTTCAGGGACGTCCACGGCTGCGCCCAGGAGGCTCG GCGGCCCAGCGCGGCGCTGGCTCCGGAAGACCTGACGGAGACGGAGTGGTTCTATCTCATGTCTGCCTCTTACTCCTTCC CTCCCGGCGTCGGGTTACCTGGAAGGGCCTTTGCAAGGGGAGGGCACGTATGGCTTAGTAGAGCAAATGAAGTTGACAGC AAGGCATTCTCAAGAGCAATACTTGCCAGGAGTGCAGGAATCAAGACGGTCGTATGCATTCCGATTGTCGATGGTGTCCT AGAAATCGGGACCACAGAAAAGGTGGAGGAAGACATGGGTTTGGTCCAGTATGCAATGGCCATCTTCATGGATCAACAAG AAACCCACATGATCTCTAGCATCTGCCATTCCAACCAAACCAGCCACATTGACCAACAGTCATTCCAAACGCAGAGGAAG ACACCCACTGGTCAGCCAAAGCCGGAGCCAAACAAGTTCAACCCAGAATACGAGGACGATGAAATGGAGTACGACGACGA CGAGATCGATGCAGAGTGCGCGTCGGGTTCAGCAAGCCATGATGATCATACAACACATAATGCAGGGAGCAGCGAGCTGA TGCAGGTTGAGACGTCAGAGAGGGTGAGAGATGGCTGCTCAAGCAACTTTGGTGATGAGATCCAAATGCTGATGGTTTGC CAGAACAGCACTGATGATCATTCCAATTTGCATGGGCAAAATGAAGCTTGGCATTTTCTCTACGAGGAGCTATGCAGTGG CTACCCTCAATCGTCAGGTGAGAACCAAGCAATGGCTGAAAATGCTCACTACGCACAGACACTCTCGTTGATCCTGCATC GCAACAACGCCCTGAGACAGGGCGGCGGCCTGAACACCGGGTCCTACCTGGCAGTCTCACTCCAATCTTCATTCTCCAGA TGGGATGCTGGCATCCATGGACGCACGGTCGCCCAAGGCACCACCCGGCAGAAGATGCTCAAGAGTGTCCTCCTGTTCTT CAGTGCTGCCTGCAACAAGCCACCGGGCGATCCGAGGTGCGACGATGCCGGCGCGCGGAGGGAGGTCGACTTCGGCGCCA GCCATGTCATGCAGGAGCGGAAGAGAAGGGAGAAGCTCAACGAGCGGTTCATCGTCCTGCGGTCCCTGGTGCCCTTCGTC ACCAAGATGGACAAGGCCTCGATCCTCGGCGACACGATCGAGTACGTGAAGCAGCTGACGAAACGCATCCAGGACCTTGA ATCATCGACGGTCAGGGGGCCGGCGATGTCGAAAGAGAAGCGTGCGCTGCCGACGGGCATGGAAGGGGCCAGCAGCAGCA GCGGCAGCACCCCTGTGGCCACGGACGTGCAGGTCTCCATCATCGAGAGCGACGCGTTGCTGGAGCTCCGGTGCCCCGAC ACGCACGGCCTGCTGGTGACCATCATGCAGACGCTCCAGGAGCAGCTCCGGCTCGAGGTCACCTCCGTCCAGGCGTCGTC GGACCACGGCGTGCTGCTCGCCGAACTGCGCGCCAAGGTGAGGGAGGTGCATGGGAGGAGGAGCAGCATTTCTCAAGTGA AGAGAGCGATCCATCTCATCATCTCATCAGGATGA |
Ta_1A:98589723-98589737:+ does not have available information here.